BAC Information

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BAC

Clone NameB6Ng01-147H09
Chromosome18 (Build37)
Map Location 71,405,912 - 71,406,774
singlet/doubletsinglet
Overlap genenone
Upstream gene4930503L19Rik, Stard6, Poli, Mbd2, EG668032
Downstream geneDcc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147H09.bB6Ng01-147H09.g
ACCDH944337DH944338
length549864
definitionDH944337|Mus musculus domesticus DNA, BAC clone: B6Ng01-147H09, 5' end.DH944338|Mus musculus domesticus DNA, BAC clone: B6Ng01-147H09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
atttgcttggagtatttttttttcatatttttaacttgatgtgacatcta
ttcttgatggtaaggtatgtttcttggaagcaacagaaaaatagatcctg
tcttcacatccaatctgtaactttgtgtctttttattgggggagttagga
ttgttaatgttgagagttatcagtgagcagtgtttatggatttctgttat
ttttctgttatggtatggtgccctctccctttgttgatctgatagtctga
gattgcttttctttggggtttcttcagtgtggttagtttctttagctagt
gcctcctgtggaattggttatgtagatagaactgctttaatttagtttta
ttgtcaactgatttcctttctgcatgtgtcgttgtgtctgtgatgataag
gagtcttgccagcgaggacacacacacaggacacacacgggttcttctgc
agcatagctttaatgcatctcgagagaaagatgatcagcttctgggggag
gaggcccagaacacaggaaactcggtccttaaatagaccacaagagggg

gaattctacatccagttatctctgtatccttccattggcattcatgtatc
tttttaaatactttaaaaagtagagatgaacatttagtaaaattgaggac
tgactgtggctctaccttcatatatataattttcctacatataggaagac
tataaaactatttatgaaatgtgtgctatttttatgaaatatttttgctt
ttgaaaagtttgcttttttatatagctcagtgctaaagctattgaataaa
gggaacatctctataactcacacatttatacaacataagtttatgtgtat
atacaattactgtttaaataggatactctagacaggtaaagagaaagttc
agtcagcatccagttcagcactcagatgagccttgtagagagctggagag
atggctcagtggttaagagcactgactgctcttccagaggtcctgagttc
aattcccagaatccacatggtggctcaccaccatttgtaatgggatcaga
tgccttcgtctggtgtgtctgaagacagctacaatgtactcatatacata
aaataaataaatcttaaaaaaaaaaaaaagagggctagagccttgtagga
aacatgctatttggaaagaattttatttatttatttttctttccattttt
tattaggtatttagctcatttacatttccaatgctataccaaaagtcccc
ccatacccacccacccccactcccctacccgcccactccccctttttggc
cctggcgttcccctgttctggggcatataaagtttgcgtgtccaatgggc
ctctctttccagtgatggccgactaggccatcttttgattcatatgcagc
tagagtcatgagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_71405912_71406774
seq2: B6Ng01-147H09.g_70_933 (reverse)

seq1  AGCTCTTGACTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCAT  50
      ||||| |||||||||||||||||| |||||||||||||||||||||||||
seq2  AGCTCATGACTCTAGCTGCATATGAATCAAAAGATGGCCTAGTCGGCCAT  50

seq1  CACTGGAAAGAGAGGCCCATTGGACACGCAAACTTTATATGCCCCAGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGAAAGAGAGGCCCATTGGACACGCAAACTTTATATGCCCCAGAAC  100

seq1  AGGGGAACGCCAGGGCCAAAAAGGGGGAGTGGGCGGGTAGGGGAGTGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAACGCCAGGGCCAAAAAGGGGGAGTGGGCGGGTAGGGGAGTGGGG  150

seq1  GTGGGTGGGTAT-GGGGGACTTTTGGTATAGCATTGGAAATGTAAATGAG  199
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GTGGGTGGGTATGGGGGGACTTTTGGTATAGCATTGGAAATGTAAATGAG  200

seq1  CTAAATACCTAATAAAAAATGGAAAGAAAAATAAATAAATAAAATTCTTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATACCTAATAAAAAATGGAAAGAAAAATAAATAAATAAAATTCTTT  250

seq1  CCAAATAGCATGTTTCCTACAAGGCTCTAGCCCTCTTTTTTTTTTTTTTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATAGCATGTTTCCTACAAGGCTCTAGCCCTCTTTTTTTTTTTTTTA  300

seq1  AGATTTATTTATTTTATGTATATGAGTACATTGTAGCTGTCTTCAGACAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTATTTATTTTATGTATATGAGTACATTGTAGCTGTCTTCAGACAC  350

seq1  ACCAGACGAAGGCATCTGATCCCATTACAAATGGTGGTGAGCCACCATGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGACGAAGGCATCTGATCCCATTACAAATGGTGGTGAGCCACCATGT  400

seq1  GGATTCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTT  450

seq1  AACCACTGAGCCATCTCTCCAGCTCTCTACAAGGCTCATCTGAGTGCTGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACTGAGCCATCTCTCCAGCTCTCTACAAGGCTCATCTGAGTGCTGA  500

seq1  ACTGGATGCTGACTGAACTTTCTCTTTACCTGTCTAGAGTATCCTATTTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGATGCTGACTGAACTTTCTCTTTACCTGTCTAGAGTATCCTATTTA  550

seq1  AACAGTAATTGTATATACACATAAACTTATGTTGTATAAATGTGTGAGTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTAATTGTATATACACATAAACTTATGTTGTATAAATGTGTGAGTT  600

seq1  ATAGAGATGTTCCCTTTATTCAATAGCTTTAGCACTGAGCTATATAAAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGATGTTCCCTTTATTCAATAGCTTTAGCACTGAGCTATATAAAAA  650

seq1  AGCAAACTTTTCAAAAGCAAAAATATTTCATAAAAATAGCACACATTTCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAACTTTTCAAAAGCAAAAATATTTCATAAAAATAGCACACATTTCA  700

seq1  TAAATAGTTTTATAGTCTTCCTATATGTAGGAAAATTATATATATGAAGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAGTTTTATAGTCTTCCTATATGTAGGAAAATTATATATATGAAGG  750

seq1  TAGAGCCACAGTCAGTCCTCAATTTTACTAAATGTTCATCTCTACTTTTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCCACAGTCAGTCCTCAATTTTACTAAATGTTCATCTCTACTTTTT  800

seq1  AAAGTATTTAAAAAGATACATGAATGCCAATGGAAGGATACAGAGATAAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTATTTAAAAAGATACATGAATGCCAATGGAAGGATACAGAGATAAC  850

seq1  TGGATGTAGAATTC  863
      ||||||||||||||
seq2  TGGATGTAGAATTC  864


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