BAC Information

Click to search

BAC

Clone NameB6Ng01-147K01
Chromosome18 (Build37)
Map Location 55,259,066 - 55,433,631
singlet/doubletdoublet
Overlap genenone
Upstream geneEG545257, LOC100042489, Zfp608, LOC100043089
Downstream geneLOC667401, LOC667409, LOC629043, LOC100043099, LOC629057, LOC100043104
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147K01.bB6Ng01-147K01.g
ACCDH944456DH944457
length754938
definitionDH944456|Mus musculus domesticus DNA, BAC clone: B6Ng01-147K01, 5' end.DH944457|Mus musculus domesticus DNA, BAC clone: B6Ng01-147K01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(55,259,066 - 55,259,818)(55,432,939 - 55,433,631)
sequence
gaattctttgaagtgtctggtattaaaccaagagctaaaatgtcagttgc
acatagacaataaattagggtttataaaatcttgtaagatttatttaata
ttacaattttgacctttagattgccttcaccatagcttctctctctcttt
ctctctctctctctctctctctctctctctcacctaccctgctgtctctt
tctcaacttgcatgtatgctatacaaaattatctgacttattcatgctgt
gaggatactgctcttgcctcctagctcactagttccctcactcctcctat
ttagagcaacaaaaccctggcatatggtgcctatttctgtgcagagcaca
caagtggagtcatgaggaaaatgttacccttttgtcctggagcaggaagt
ccttccttgtggaatggatcctggggacaagctagaggctgtacagcacc
actcagaatcctcagctttttagcaaggaggatggaaggtgaggcatctc
acacatagaacttcaattttgaatgagattgactaaaactataagaaaaa
aaaacctttcagacaaaattttcattatccccattgagaaaaccaaaacc
agaattttcctaaaagaatgcacatcaatgaggactaccatttctctcac
acctcataggagaagcctgcaagcaacgtgtgctcattactaaggacttt
tccaaaaagtgtagtgaatgtagaagggagacgggagatatttaggatgg
aggg
gaattctagaaggctgaccagagactatctccctaggaaacagctaaaga
tggagaagagaggaattacagactgtgaagagaaagaaacacatcactag
ttgtaagcaggtggcaaagtgaagtcatcaaaagggccaaatgactggta
ttaaaagggcaagaaagagcagcaggactggagatcaggatgccaggtga
agagcagcgtcagctgccctccctctctgagaggatttgatggttttatt
ctgctgagatgagaagactttgcagagcttgatatgatctgattgatctg
attggctttaaccggatcattatagttgttgtgttgaaaacatactaact
ggtgtgaaccacagggagactccctggaggttggacacactcatctaatg
agaagataagcatgcatcggacctaaaggttagcaggggagatgatgaaa
cccaaccaaggttgaggatgaattttagcagaacttgatgccaggtggga
tttgaaatgaaataggaagaaaggacctaacgatgtgtcatgggaaggat
caataggccattgagagcagcataaaacggtgtgtggagaatattggcta
aaaataagcctgggattcattccagtatgactgttttcatgctctttgac
aaccaactagcacttccttgtctaaagattggaactgagattcaaactaa
gaagacatgcttaggaccatgatcctaaaggacgtagagattttaagatc
ccagacgtagtgtggtcacgaacgcactttgaagaattttttttttctgg
tagttgaggtaaataatttctgtcagttgaaaacattccggacaccagac
acaagtcacatgcaaacagtagggacttgacaggtccagagcacagtcct
tttggaatcactcgctttgaacaccaaatgtcagagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_55259066_55259818
seq2: B6Ng01-147K01.b_42_795

seq1  GAATTCTTTGAAGTGTCTGGTATTAAACCAAGAGCTAAAATGTCAGTTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGAAGTGTCTGGTATTAAACCAAGAGCTAAAATGTCAGTTGC  50

seq1  ACATAGACAATAAATTAGGGTTTATAAAATCTTGTAAGATTTATTTAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGACAATAAATTAGGGTTTATAAAATCTTGTAAGATTTATTTAATA  100

seq1  TTACAATTTTGACCTTTAGATTGCCTTCACCATAGCTTCTCTCTCTCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAATTTTGACCTTTAGATTGCCTTCACCATAGCTTCTCTCTCTCTTT  150

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACCTACCCTGCTGTCTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACCTACCCTGCTGTCTCTT  200

seq1  TCTCAACTTGCATGTATGCTATACAAAATTATCTGACTTATTCATGCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAACTTGCATGTATGCTATACAAAATTATCTGACTTATTCATGCTGT  250

seq1  GAGGATACTGCTCTTGCCTCCTAGCTCACTAGTTCCCTCACTCCTCCTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATACTGCTCTTGCCTCCTAGCTCACTAGTTCCCTCACTCCTCCTAT  300

seq1  TTAGAGCAACAAAACCCTGGCATATGGTGCCTATTTCTGTGCAGAGCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGCAACAAAACCCTGGCATATGGTGCCTATTTCTGTGCAGAGCACA  350

seq1  CAAGTGGAGTCATGAGGAAAATGTTACCCTTTTGTCCTGGAGCAGGAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGGAGTCATGAGGAAAATGTTACCCTTTTGTCCTGGAGCAGGAAGT  400

seq1  CCTTCCTTGTGGAATGGATCCTGGGGACAAGCTAGAGGCTGTACAGCACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTTGTGGAATGGATCCTGGGGACAAGCTAGAGGCTGTACAGCACC  450

seq1  ACTCAGAATCCTCAGCTTTTTAGCAAGGAGGATGGAAGGTGAGGCATCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGAATCCTCAGCTTTTTAGCAAGGAGGATGGAAGGTGAGGCATCTC  500

seq1  ACACATAGAACTTCAATTTTGAATGAGATTGACTAAAACTATAAGAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATAGAACTTCAATTTTGAATGAGATTGACTAAAACTATAAGAAAAA  550

seq1  AAAACCTTTCAGACAAAATTTTCATTATCCCCATTGAGAAAACCAAAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCTTTCAGACAAAATTTTCATTATCCCCATTGAGAAAACCAAAACC  600

seq1  AGAATTTTCCTAAAAGAATGCACATCAATGAGGACTACCATTTCTCTCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTTCCTAAAAGAATGCACATCAATGAGGACTACCATTTCTCTCAC  650

seq1  ACCTCATAGGAGAAGCCTGCAAGCAACGTGTGCTCATTACTAAGGACTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCATAGGAGAAGCCTGCAAGCAACGTGTGCTCATTACTAAGGACTTT  700

seq1  TCCAAAAAGTGTAGTGAATGTAGAAGGGAGACGGGAGATA-TTAGGATGG  749
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCCAAAAAGTGTAGTGAATGTAGAAGGGAGACGGGAGATATTTAGGATGG  750

seq1  AGGG  753
      ||||
seq2  AGGG  754

seq1: chr18_55432939_55433631
seq2: B6Ng01-147K01.g_316_1009 (reverse)

seq1  GACTCTGACATTT-GTGTTTCAAGCGAGGTGATTCCCAAAAGGACTGTGC  49
      ||||||||||||| |||||  |||||| |||||| |||||||||||||||
seq2  GACTCTGACATTTGGTGTTCAAAGCGA-GTGATT-CCAAAAGGACTGTGC  48

seq1  TCTGGACCTGTCAAGTCCCTACTGTTTGCATGTGACTTGTGTCTGGTGTC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGACCTGTCAAGTCCCTACTGTTTGCATGTGACTTGTGTCTGGTGTC  98

seq1  CGAATTGTTTTCAACTGACAGAAATTATTTACCTC-ACTACCAGAAAAAA  148
      || | |||||||||||||||||||||||||||||| ||||||||||||||
seq2  CGGAATGTTTTCAACTGACAGAAATTATTTACCTCAACTACCAGAAAAAA  148

seq1  AAAATTCTTC-AAGTGCGTTCGTGACCACACTACGTCTGGGATCTTAAAA  197
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCTTCAAAGTGCGTTCGTGACCACACTACGTCTGGGATCTTAAAA  198

seq1  TCTCTACGTCCTTTAGGATCATGGTCCTAAGCATGTCTTCTTAGTTTGAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTACGTCCTTTAGGATCATGGTCCTAAGCATGTCTTCTTAGTTTGAA  248

seq1  TCTCAGTTCCAATCTTTAGACAAGGAAGTGCTAGTTGGTTGTCAAAGAGC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGTTCCAATCTTTAGACAAGGAAGTGCTAGTTGGTTGTCAAAGAGC  298

seq1  ATGAAAACAGTCATACTGGAATGAATCCCAGGCTTATTTTTAGCCAATAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAACAGTCATACTGGAATGAATCCCAGGCTTATTTTTAGCCAATAT  348

seq1  TCTCCACACACCGTTTTATGCTGCTCTCAATGGCCTATTGATCCTTCCCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCACACACCGTTTTATGCTGCTCTCAATGGCCTATTGATCCTTCCCA  398

seq1  TGACACATCGTTAGGTCCTTTCTTCCTATTTCATTTCAAATCCCACCTGG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACATCGTTAGGTCCTTTCTTCCTATTTCATTTCAAATCCCACCTGG  448

seq1  CATCAAGTTCTGCTAAAATTCATCCTCAACCTTGGTTGGGTTTCATCATC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAGTTCTGCTAAAATTCATCCTCAACCTTGGTTGGGTTTCATCATC  498

seq1  TCCCCTGCTAACCTTTAGGTCCGATGCATGCTTATCTTCTCATTAGATGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTGCTAACCTTTAGGTCCGATGCATGCTTATCTTCTCATTAGATGA  548

seq1  GTGTGTCCAACCTCCAGGGAGTCTCCCTGTGGTTCACACCAGTTAGTATG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTCCAACCTCCAGGGAGTCTCCCTGTGGTTCACACCAGTTAGTATG  598

seq1  TTTTCAACACAACAACTATAATGATCCGGTTAAAGCCAATCAGATCAATC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAACACAACAACTATAATGATCCGGTTAAAGCCAATCAGATCAATC  648

seq1  AGATCATATCAAGCTCTGCAAAGTCTTCTCATCTCAGCAGAATAAA  693
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCATATCAAGCTCTGCAAAGTCTTCTCATCTCAGCAGAATAAA  694