BAC Information

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BAC

Clone NameB6Ng01-147P20
Chromosome18 (Build37)
Map Location 46,014,615 - 46,015,544
singlet/doubletsinglet
Overlap genenone
Upstream geneYthdc2, LOC626309, LOC225457, LOC100042900, Kcnn2
Downstream geneTrim36, LOC100042905, Pggt1b, Ccdc112, EG225468, LOC100042916, Mospd4, LOC100042204, Fem1c, Ticam2, Eif1a, LOC100042226, Cdo1, Atg12, Ap3s1, LOC100042950, 4833403I15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147P20.bB6Ng01-147P20.g
ACCDH944714DH944715
length930977
definitionDH944714|Mus musculus domesticus DNA, BAC clone: B6Ng01-147P20, 5' end.DH944715|Mus musculus domesticus DNA, BAC clone: B6Ng01-147P20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacaccccataaaaacccctagctttcaatcctcggggccgaca
tcctttatctcctgtgtgggatgcatgtcagtccggagctccgtaattaa
acgtcctcatgtaattacatcaagagatggtccttcgcgtgattttttgg
gtgtacgccgaatcgggaattgggtgggggtttccccactagatctaaca
ttacactggcacatactctttgcatctattttatgaaagcttgggcgcaa
agctttcatatttaaaagtcacattatgagacctggaaaggtgtctcagc
aattaagagtaccccttcctctcgtagattatccaggttcagttctcagc
acccacatgaaggctcagaactgtctgtacttccagttcttaggtatctg
atggcactagggcacacatgcagtgcacatacatacatgcagactaaaac
acttgtagatataaaataaaaaataagtgctttatagatttttaaaagaa
aataatctccacaacactctctggtcacctaattaaagaacacattaaac
ctgaggttctcaatccctaaagcacaggatgacccccttagattgttaag
gcacacagccgggctggatcccaggagctttaaatttgacaagtcagact
gtggtctacattccatgcttccaataaggctggcattgctgatctggaat
agcacactgggaatcagtactctacagcgttatattggatcattattatg
tcaggtttccatggatgacagcaagcaaaccagatcatgattcctgcctt
cagtgtgtagtctagtaggctaaacagatgtcaggttgtttagcaagtaa
ccaaaaatgggcagggcttgggggtagaggtaaatgttagtctctcagga
actcctctggggtgtttaacaatgagctac
gaattctttgtttagatctgtaccctgttatttaattggatcatttggtt
tgttgatatctagttttttgaggtctttatatattttggatatcagccct
ctgtcagatgtggagttgataaagataatttcccattctgtagacagctg
ttttgtcttttggtggtatcctctactttatagaagcttttcagtttctg
taggtcccatttattaattgttgatcttagttcctacatgattggtgttc
tgttcaggaagttgtctactgtgccattgcattcaagactattccctact
ttctcttctatcaggttcagtatatacagttttatgttgatgtctttgat
ccacttggacttgagttttgtaggtgataaacatagcctatttgcattct
tctacatgctgatatctaaatactccagcaccattagtttaagatgcttt
atttttttccactgtataattttggcttctttgtcaaaaatcagatgtct
atagttgtggggattcatatgtgggtcttcaacttgattccatcgatcaa
tgtttctgtttttatgccaataccatgtggtagaacttgaaattagggat
gttactacttcttggaatttgtttttattgtccaggattgttttagttat
cctaggttttttgtttttccatatgaagttgagttttgttctttcagagt
ctgtaaagaattgtgttggaattctgatggggattatgtttgaatctaga
ttatttttgctaaaatggctatttttactatgttaatcctaccaatcaat
gatcatgggagatcttcccatcttctggttatcttcttcaatttctttct
ttaggagacttgtagctcttatcatatatgccttttactgcttggttaga
tattttatatttataatatttatattatttggagctatagtggagggggg
gttgtttcttaatttctttcccataac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_46014615_46015544
seq2: B6Ng01-147P20.b_42_971

seq1  GAATTCCACACCCCATAAAAACCCCTAGCTTTCAATCCTCGGGGCCGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACACCCCATAAAAACCCCTAGCTTTCAATCCTCGGGGCCGACA  50

seq1  TCCTTTATCTCCTGTGTGGGATGCATGTCAGTCCGGAGCTCCGTAATTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTATCTCCTGTGTGGGATGCATGTCAGTCCGGAGCTCCGTAATTAA  100

seq1  ACGTCCTCATGTAATTACATCAAGAGATGGTCCTTCGCGTGATTTTTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCCTCATGTAATTACATCAAGAGATGGTCCTTCGCGTGATTTTTTGG  150

seq1  GTGTACGCCGAATCGGGAATTGGGTGGGGGTTTCCCCACTAGATCTAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACGCCGAATCGGGAATTGGGTGGGGGTTTCCCCACTAGATCTAACA  200

seq1  TTACACTGGCACATACTCTTTGCATCTATTTTATGAAAGCTTGGGCGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACTGGCACATACTCTTTGCATCTATTTTATGAAAGCTTGGGCGCAA  250

seq1  AGCTTTCATATTTAAAAGTCACATTATGAGACCTGGAAAGGTGTCTCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCATATTTAAAAGTCACATTATGAGACCTGGAAAGGTGTCTCAGC  300

seq1  AATTAAGAGTACCCCTTCCTCTCGTAGATTATCCAGGTTCAGTTCTCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGAGTACCCCTTCCTCTCGTAGATTATCCAGGTTCAGTTCTCAGC  350

seq1  ACCCACATGAAGGCTCAGAACTGTCTGTACTTCCAGTTCTTAGGTATCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACATGAAGGCTCAGAACTGTCTGTACTTCCAGTTCTTAGGTATCTG  400

seq1  ATGGCACTAGGGCACACATGCAGTGCACATACATACATGCAGACTAAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCACTAGGGCACACATGCAGTGCACATACATACATGCAGACTAAAAC  450

seq1  ACTTGTAGATATAAAATAAAAAATAAGTGCTTTATAGATTTTTAAAAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTAGATATAAAATAAAAAATAAGTGCTTTATAGATTTTTAAAAGAA  500

seq1  AATAATCTCCACAACACTCTCTGGTCACCTAATTAAAGAACACATTAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATCTCCACAACACTCTCTGGTCACCTAATTAAAGAACACATTAAAC  550

seq1  CTGAGGTTCTCAATCCCTAAAGCACAGGATGACCCCCTTAGATTGTTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGTTCTCAATCCCTAAAGCACAGGATGACCCCCTTAGATTGTTAAG  600

seq1  GCACACAGCCGGGCTGGATCCCAGGAGCTTTAAATTTGACAAGTCAGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACAGCCGGGCTGGATCCCAGGAGCTTTAAATTTGACAAGTCAGACT  650

seq1  GTGGTCTACATTCCATGCTTCCAATAAGGCTGGCATTGCTGATCTGGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCTACATTCCATGCTTCCAATAAGGCTGGCATTGCTGATCTGGAAT  700

seq1  AGCACACTGGGAATCAGTACTCTACAGCGTTATATTGGATCATTATTATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACACTGGGAATCAGTACTCTACAGCGTTATATTGGATCATTATTATG  750

seq1  TCAGG-TTCCATGGATGACAGCAAGCAAACCAGATCATGATTCCTGCCTT  799
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTTTCCATGGATGACAGCAAGCAAACCAGATCATGATTCCTGCCTT  800

seq1  CAGTGTGTAGTCTAGTAGGCTAAACAGATGTCAGGTTGGTTAGCAAGTAA  849
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CAGTGTGTAGTCTAGTAGGCTAAACAGATGTCAGGTTGTTTAGCAAGTAA  850

seq1  CCAAAAATGGGCAGGGCTTGGGGGTAGAGGTAAATGTTAAGTCTTCTCAG  899
      |||||||||||||||||||||||||||||||||||||| |||| ||||||
seq2  CCAAAAATGGGCAGGGCTTGGGGGTAGAGGTAAATGTT-AGTC-TCTCAG  898

seq1  GAACT-CTCCTGGGTGTTTAACAATGAGCTAC  930
      ||||| |||  |||||||||||||||||||||
seq2  GAACTCCTCTGGGGTGTTTAACAATGAGCTAC  930