BAC Information

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BAC

Clone NameB6Ng01-148G21
Chromosome18 (Build37)
Map Location 9,966,592 - 9,967,635
singlet/doubletsinglet
Overlap geneThoc1
Upstream geneLOC665161, Fzd8, 9430022F06Rik, Ccny, LOC665176, LOC665184, EG639618, LOC100039755, Cetn1, LOC225155, Colec12, LOC665111, LOC100039787, EG433161
Downstream geneUsp14, Rock1, LOC100039978, LOC635344, LOC435554, AK220484, LOC621832, Esco1, Snrpd1, LOC100039880, Abhd3, Mib1, LOC665296
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148G21.bB6Ng01-148G21.g
ACCDH945044DH945045
length1,0451,024
definitionDH945044|Mus musculus domesticus DNA, BAC clone: B6Ng01-148G21, 5' end.DH945045|Mus musculus domesticus DNA, BAC clone: B6Ng01-148G21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacttgcaggcctagcccttggatacagaatttaccattacaata
catagcagcagaccaaacctgtcttgtcttttattctacctgcttgcctt
cttatatgaatatctgtctgtctgtctgtctgtctgtctgtctgtctcta
ttacactctaaatcatttgatgtggttctcatatctgggagatcttttca
ctttttagctttttactccctgttgatactttgaactttgctttctagtt
ttaaaatatggtaagcatgtgtctatatctgatcatttcagtgtgttgta
tttttgtgatatcttttttggttttaacttagaatgtcttgtgtttctga
taactgttgtattttttttttttctttttggttttttgaaacagggtttc
tctgtgtagccctggctgccctgaaattctgtagatcagtctggcctcaa
actcagaaatccgccttcctctgcctcccaagcgctgggattaaaagcat
gtgccaccactgcccggtgagaagaatagttttgagtcccatgatggata
actttcttgagagaaggttttcattgcttgtatatggtgcctctaagatc
agagccttcatcgtccagaaaattcggcaccatactacagtttttcaatg
ttgtctaaagatgtagattaaaagatgtcttgataagagatctttttaga
tcatttattagatttttcatcttttggggggggcaaaagctactagtaga
ataactgaatttcctatctaattctctgtgacaggaattataaggatagt
atagatatctgaatacggttatatagtatcactagtgtctaatacaatta
ttaacactaagaaatccattgctacagtcctggttgccagctggagacat
tagaatttcatcaccttgatcactacttccctttctatccaggatcttga
tgtggcctagtctcttcagtcaccagtcccttagtctctccttaatccct
tttggacttacacataggaattaaagttaggtgttttaagaactc
gaattctctggtggaaattttggggtcacttacatgtatcctcatatcac
ctgcaaacagtgatattgttgcttcttcctttccaatttgcattcctttg
atctccttttattgctctggcaattactggcaagtactatattgaatagg
tagggagagagtgggctttctattttttatgttgttattgaagatcagcc
ttagtctgtgatgatctggtagggtacataggattattttaatatttttt
atctccttaggcctgtttggtgaccgattttatggtcagttttggagaag
gtaccatgaggtgctgagattaaggtatatccttctgttttaggatgaaa
tgttctgtagatatctggtaaatccatttgtttgataacttctgttagtt
tcactgtgtctctgtgtagtttctgtttccaggatctgtccattgatgag
agaggggtgttaaagtctcccaataatattgtgtgaggtgtaatgtgtgc
tttgggttttagtaaagtttctttaatgaatgtggatacccttgcatttg
gagcatagatgtctagaattcagagttcatcttgctaaattttacctttg
atgagtatgaagtgcccctccttatcttttttgataactttgggttggaa
gtcgatattattcgatattagaatggctactcctgcttgtttcttgggac
catttgcttggaaaattgttttccagccttttactctaaggtgtatttgt
ctttgtccctgaggtaggtttcctgtatgcagcaaaaagttgggtcctgt
ttacgtgaccagtctgttagtctatgtctttttattgaggaattgtgtcc
attgatattagagatattaaggaaagtctttgttgcttcctttttaattt
tgttgttagagtggaattctgttcatgtagagctatcttccttagggttg
ttgaaatacggtcttctgctttttctcaagctttgttccccattgatgga
gattttccattattaccttgaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_9966592_9967635
seq2: B6Ng01-148G21.b_47_1091

seq1  GAATTCACTTGCAGGCCTAGCCCTTGGATACAGAATTTACCATTACAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTGCAGGCCTAGCCCTTGGATACAGAATTTACCATTACAATA  50

seq1  CATAGCAGCAGACCAAACCTGTCTTGTCTTTTATTCTACCTGCTTGCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCAGCAGACCAAACCTGTCTTGTCTTTTATTCTACCTGCTTGCCTT  100

seq1  CTTATATGAATATCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATATGAATATCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTCTA  150

seq1  TTACACTCTAAATCATTTGATGTGGTTCTCATATCTGGGAGATCTTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACTCTAAATCATTTGATGTGGTTCTCATATCTGGGAGATCTTTTCA  200

seq1  CTTTTTAGCTTTTTACTCCCTGTTGATACTTTGAACTTTGCTTTCTAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAGCTTTTTACTCCCTGTTGATACTTTGAACTTTGCTTTCTAGTT  250

seq1  TTAAAATATGGTAAGCATGTGTCTATATCTGATCATTTCAGTGTGTTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATATGGTAAGCATGTGTCTATATCTGATCATTTCAGTGTGTTGTA  300

seq1  TTTTTGTGATATCTTTTTTGGTTTTAACTTAGAATGTCTTGTGTTTCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTGATATCTTTTTTGGTTTTAACTTAGAATGTCTTGTGTTTCTGA  350

seq1  TAACTGTTGTATTTTTTTTTTTTCTTTTTGGTTTTTTGAAACAGGGTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGTTGTATTTTTTTTTTTTCTTTTTGGTTTTTTGAAACAGGGTTTC  400

seq1  TCTGTGTAGCCCTGGCTGCCCTGAAATTCTGTAGATCAGTCTGGCCTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTAGCCCTGGCTGCCCTGAAATTCTGTAGATCAGTCTGGCCTCAA  450

seq1  ACTCAGAAATCCGCCTTCCTCTGCCTCCCAAGCGCTGGGATTAAAAGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGAAATCCGCCTTCCTCTGCCTCCCAAGCGCTGGGATTAAAAGCAT  500

seq1  GTGCCACCACTGCCCGGTGAGAAGAATAGTTTTGAGTCCCATGATGGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCACCACTGCCCGGTGAGAAGAATAGTTTTGAGTCCCATGATGGATA  550

seq1  ACTTTCTTGAGAGAAGGTTTTCATTGCTTGTATATGGTGCCTCTAAGATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTTGAGAGAAGGTTTTCATTGCTTGTATATGGTGCCTCTAAGATC  600

seq1  AGAGCCTTCATCGTCCAGAAAATTCGGCACCATACTACAGTTTTTCAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCTTCATCGTCCAGAAAATTCGGCACCATACTACAGTTTTTCAATG  650

seq1  TTGTCTAAAGATGTAGATTAAAAGATGTCTTGATAAGAGATCTTTTTAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTAAAGATGTAGATTAAAAGATGTCTTGATAAGAGATCTTTTTAGA  700

seq1  TCATTTATTAGATTTTTCATCTTTTGGGGGGGGCAAAAGCTACTAGTAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTATTAGATTTTTCATCTTTTGGGGGGGGCAAAAGCTACTAGTAGA  750

seq1  ATAACTGAATTTCCTATCTAATTCTCTGTGACAGGAATTATAAGGATAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTGAATTTCCTATCTAATTCTCTGTGACAGGAATTATAAGGATAGT  800

seq1  ATAGATATCTGAATACGGTTATATAGTATCACTAGTGTCTAATACAATTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATATCTGAATACGGTTATATAGTATCACTAGTGTCTAATACAATTA  850

seq1  TTAACACTAAGAAATCCATTGCTACAGTCCTGGTTGCCAGCTGGAGACAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACACTAAGAAATCCATTGCTACAGTCCTGGTTGCCAGCTGGAGACAT  900

seq1  TAGAATTTCATCACCTTGATCACTACTTCCCTTTCCTATTCCAGGATCTT  950
      |||||||||||||||||||||||||||||||||| ||| |||||||||||
seq2  TAGAATTTCATCACCTTGATCACTACTTCCCTTT-CTA-TCCAGGATCTT  948

seq1  GATGTGCCCTAGTCTCTCCAGTCA-CAGTCCCTTAGTCTCTC--TTATCT  997
      |||||| |||||||||| |||||| |||||||||||||||||  | ||| 
seq2  GATGTGGCCTAGTCTCTTCAGTCACCAGTCCCTTAGTCTCTCCTTAATCC  998

seq1  CTTGT-GACTTAACACATAGGAATTAAAGTTAGGTGTTTTAAGAACTC  1044
      ||| | ||||| ||||||||||||||||||||||||||||||||||||
seq2  CTTTTGGACTT-ACACATAGGAATTAAAGTTAGGTGTTTTAAGAACTC  1045