BAC Information

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BAC

Clone NameB6Ng01-148H18
Chromosome18 (Build37)X (Build37)
Map Location 27,243,071 - 27,244,09786,420,944 - 86,421,628
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG665977
Downstream geneEG665646
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148H18.bB6Ng01-148H18.g
ACCDH945082DH945083
length1,017848
definitionDH945082|Mus musculus domesticus DNA, BAC clone: B6Ng01-148H18, 5' end.DH945083|Mus musculus domesticus DNA, BAC clone: B6Ng01-148H18, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(27,243,071 - 27,244,097)(86,420,944 - 86,421,628)
sequence
gaattctcaaaatcccagcaaatttcatgaaatcttatttagaagtagct
atgaaagcatgcctttgctgatttggattatataccttggtagaagtttt
aatcactaattattaccttcaggagtaactgtaattatcgttggcattct
gattatttccaacagatcatctctaggtaggcccaagtgataacaatgtc
taaaaagcctacatgagccatgtgttcaggaaatctttatttgtttgttt
gacagaggggccccaattgggaagcctcttagtgcttctgtttcctcaag
cacccccaataaccatgttctttatgttctatcttcacaagcacttttta
tgcttaataaagtttatctatggaatcatacagctagacagtgaccagtc
aaatcaacatctttagactttttccatcctatagctgttatctctcagaa
taatttgtgataggacagaggtgcagacagtattacccaagtctctgaca
ttgtgaacaaaacacaggatggtaacagaaggaagaaggaatcaattcac
taattcactaggtgaaaaaatattttaatattgttgtggtttgaatgaaa
atgctccccatagtcagggctatttaaatatgtgattctctcttggtagc
actgtttcagaaaacctgtaggccacaaagtcttgatgaaaatactttga
taatatattgcactgcctcattgtatctcctgtttctttctctgaatctg
tctctctgtctctgtcagtttcattctgttaatgcccgctctctctcctt
tctgtgtacagataaaaatttgatcagccattttccatttctgttgatat
gtcttcctgacatttggattatagaccattcttctacgtaaattactttt
ggtcgagtattatagagcaacattaaacttatacaacatcaatatagatt
ctctgagatgttcaaaactaataataaagtgatgatagatcgtgtgtgat
ggatatgcatgaatctg
gaattctgcatactgagaggatgagcgccttgtctatgcatccacagaaa
tatattttaatgagtagagtgtgaagaatcagttgaaggaataattcatt
tagcaaaaatattctctctccatatatatctgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgagtgtgttacgaagggttttatcagcttattaacaatata
aataatttatttggatatgtttaaacattcactcatgattttttaaaaat
atgttcctctgtcatgagtgttaaagattgttatgcatactagaaacaag
tatgttaccagaaacatgattgacaaatacttttaaatctcttgaaagta
tgctttgcctttgtaggtttccttttaatctcagcctgtatttgcatgtg
aggtggtgggatataaaataaagcctaggaaaaagattaggccttaggag
ctagatagttttctatctgctaacactgggtacagtacaatctcctgcca
atcttcatgtagtatttagcaatctgttagcaattctgtttggcttcttt
gagctaagagttagttgccactcacctgattttttagtcatgagtgtata
tttttgtatagctttttgtcactgtaaggattggaataagacttgttgga
actttttatttccctagcagaatccataagattttttgctctgttttaag
gtaatttcatttatctgatgtgggattcacaaaacaattgctaatggccc
acaaaattcctgataaaatcctaagtgaaaggagacagttttatatacat
tgaatattcaggctacaatatgatgaaagcaaagattatacaagtctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_27243071_27244097
seq2: B6Ng01-148H18.b_43_1059 (reverse)

seq1  CAGA-TCATGCATATACCAACACACACTGATATATCAATCACTTATATAT  49
      |||| |||||||||| ||| ||||||| ||| |||| |||||||   |||
seq2  CAGATTCATGCATAT-CCATCACACAC-GATCTATC-ATCACTTTATTAT  47

seq1  TAGTTTTAGAACATCTCAGAGAAATCTATATTGATGTTTGTATTAGTTTT  99
      ||||||| ||||||||||||| |||||||||||||| |||||| || |||
seq2  TAGTTTT-GAACATCTCAGAG-AATCTATATTGATG-TTGTATAAG-TTT  93

seq1  ATTGTTGCTCTTATAAATACTATGACCAAAAGTAATTTAAGGAAGAAAGA  149
      | |||||||| ||| ||||||  |||||||||||||||| | |   ||||
seq2  AATGTTGCTC-TAT-AATACT-CGACCAAAAGTAATTTACGTA--GAAGA  138

seq1  ATGGTCTAAAATCATAATGTCAGGAAGACATAACAACAGGAATGGAAAAA  199
      |||||||| ||||  ||||||||||||||||| |||||| ||||||||| 
seq2  ATGGTCTATAATCCAAATGTCAGGAAGACATATCAACAGAAATGGAAAAT  188

seq1  GGCTGATCATATTTTTATCTGTACACAGAAAGGAGAGAGAGCGGGTATAA  249
      ||||||||| ||||||||||||||||||||||||||||||||||| || |
seq2  GGCTGATCAAATTTTTATCTGTACACAGAAAGGAGAGAGAGCGGGCATTA  238

seq1  ACAGAAAGAAACTGACAGAGACAGAGAGACAGATTCAGAGAAAGAAACAG  299
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAATGAAACTGACAGAGACAGAGAGACAGATTCAGAGAAAGAAACAG  288

seq1  GAGATACAATGAGGCAGTGCAATATATTATCAAAGTATTTTCATCAAGAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATACAATGAGGCAGTGCAATATATTATCAAAGTATTTTCATCAAGAC  338

seq1  TTTGTGGCCTACAGG-TTTCTGAAACAGTGCTACCAAGAGAGAATCACAT  398
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTTGTGGCCTACAGGTTTTCTGAAACAGTGCTACCAAGAGAGAATCACAT  388

seq1  ATTTAAATAGCCCTGACTATGGGGAGCATTTTCATTCAAACCACAACAAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAATAGCCCTGACTATGGGGAGCATTTTCATTCAAACCACAACAAT  438

seq1  ATTAAAATATTTTTTCACCTAGTGAATTAGTGAATTGATTCCTTCTTCCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAATATTTTTTCACCTAGTGAATTAGTGAATTGATTCCTTCTTCCT  488

seq1  TCTGTTACCATCCTGTGTTTTGTTCACAATGTCAGAGACTTGGGTAATAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTACCATCCTGTGTTTTGTTCACAATGTCAGAGACTTGGGTAATAC  538

seq1  TGTCTGCACCTCTGTCCTATCACAAATTATTCTGAGAGATAACAGCTATA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGCACCTCTGTCCTATCACAAATTATTCTGAGAGATAACAGCTATA  588

seq1  GGATGGAAAAAGTCTAAAGATGTTGATTTGACTGGTCACTGTCTAGCTGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGAAAAAGTCTAAAGATGTTGATTTGACTGGTCACTGTCTAGCTGT  638

seq1  ATGATTCCATAGATAAACTTTATTAAGCATAAAAAGTGCTTGTGAAGATA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTCCATAGATAAACTTTATTAAGCATAAAAAGTGCTTGTGAAGATA  688

seq1  GAACATAAAGAACATGGTTATTGGGGGTGCTTGAGGAAACAGAAGCACTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATAAAGAACATGGTTATTGGGGGTGCTTGAGGAAACAGAAGCACTA  738

seq1  AGAGGCTTCCCAATTGGGGCCCCTCTGTCAAACAAACAAATAAAGATTTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCTTCCCAATTGGGGCCCCTCTGTCAAACAAACAAATAAAGATTTC  788

seq1  CTGAACACATGGCTCATGTAGGCTTTTTAGACATTGTTATCACTTGGGCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACACATGGCTCATGTAGGCTTTTTAGACATTGTTATCACTTGGGCC  838

seq1  TACCTAGAGATGATCTGTTGGAAATAATCAGAATGCCAACGATAATTACA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTAGAGATGATCTGTTGGAAATAATCAGAATGCCAACGATAATTACA  888

seq1  GTTACTCCTGAAGGTAATAATTAGTGATTAAAACTTCTACCAAGGTATAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTCCTGAAGGTAATAATTAGTGATTAAAACTTCTACCAAGGTATAT  938

seq1  AATCCAAATCAGCAAAGGCATGCTTTCATAGCTACTTCTAAATAAGATTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAAATCAGCAAAGGCATGCTTTCATAGCTACTTCTAAATAAGATTT  988

seq1  CATGAAATTTGCTGGGATTTTGAGAATTC  1027
      |||||||||||||||||||||||||||||
seq2  CATGAAATTTGCTGGGATTTTGAGAATTC  1017

seq1: chrX_86420944_86421628
seq2: B6Ng01-148H18.g_234_915

seq1  TTACGAAGGGTTTTATCAGCTTATTAACAATATAAATAATTTATTTGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGAAGGGTTTTATCAGCTTATTAACAATATAAATAATTTATTTGGAT  50

seq1  ATGTTTAAACATTCACTCATGATTTTTTAAAAATATGTTCCTCTGTCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTAAACATTCACTCATGATTTTTTAAAAATATGTTCCTCTGTCATG  100

seq1  AGTGTTAAAGATTGTTATGCATACTAGAAACAAGTATGTTACCAGAAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTAAAGATTGTTATGCATACTAGAAACAAGTATGTTACCAGAAACA  150

seq1  TGATTGACAAATACTTTTAAATCTCTTGAAAGTATGCTTTGCCTTTGTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGACAAATACTTTTAAATCTCTTGAAAGTATGCTTTGCCTTTGTAG  200

seq1  GTTTCCTTTTAATCTCAGCCTGTATTTGCATGTGAGGTGGTGGGATATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCTTTTAATCTCAGCCTGTATTTGCATGTGAGGTGGTGGGATATAA  250

seq1  AATAAAGCCTAGGAAAAAGATTAGGCCTTAGGAGCTAGATAGTTTTCTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGCCTAGGAAAAAGATTAGGCCTTAGGAGCTAGATAGTTTTCTAT  300

seq1  CTGCTAACACTGGGTACAGTACAATCTCCTGCCAATCTTCATGTAGTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTAACACTGGGTACAGTACAATCTCCTGCCAATCTTCATGTAGTATT  350

seq1  TAGCAATCTGTTAGCAATTCTGTTTGGCTTCTTTGAGCTAAGAGTTAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAATCTGTTAGCAATTCTGTTTGGCTTCTTTGAGCTAAGAGTTAGTT  400

seq1  GCCACTCACCTGA-TTTTTAGTCATGAGTGTATA-TTTTGTATAGC-TTT  447
      ||||||||||||| |||||||||||||||||||| ||||||||||| |||
seq2  GCCACTCACCTGATTTTTTAGTCATGAGTGTATATTTTTGTATAGCTTTT  450

seq1  TGTCACTGTAAGGATTGGAATAAGACTTGTTGGAACTTTTTATTTCCCTA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACTGTAAGGATTGGAATAAGACTTGTTGGAACTTTTTATTTCCCTA  500

seq1  GCAGAATCCATAAGATTTTTTGCTCTGTTTTTAAGGTAATTTCATTTATC  547
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GCAGAATCCATAAGATTTTTTGCTCTG-TTTTAAGGTAATTTCATTTATC  549

seq1  TGATGTGGGATTCACAAAACAATTGCTTAATGGCCCACAAAATTTCCTGA  597
      |||||||||||||||||||||||||| ||||||||||||||| |||||||
seq2  TGATGTGGGATTCACAAAACAATTGC-TAATGGCCCACAAAA-TTCCTGA  597

seq1  CAAAATTCTAAGTGAAAGGAGACAGTTTTATTATACAATGAATATT-AAG  646
       ||||| ||||||||||||||||||||||| |||||| |||||||| | |
seq2  TAAAATCCTAAGTGAAAGGAGACAGTTTTA-TATACATTGAATATTCAGG  646

seq1  CTAAAATATGATGAAAAGCAAAGATATATTACAAGTCTG  685
      ||| ||||||||| ||||||||||| || ||||||||||
seq2  CTACAATATGATG-AAAGCAAAGAT-TA-TACAAGTCTG  682