BAC Information

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BAC

Clone NameB6Ng01-149I16
Chromosome18 (Build37)
Map Location 69,054,468 - 69,171,181
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC667939, D18Ertd653e, 4933403F05Rik, Rnmt, Mc5r, Mc2r
Downstream geneLOC100043380, EG225681, Tcf4, Ccdc68, Rab27b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149I16.bB6Ng01-149I16.g
ACCDH945855DH945856
length522971
definitionDH945855|Mus musculus domesticus DNA, BAC clone: B6Ng01-149I16, 5' end.DH945856|Mus musculus domesticus DNA, BAC clone: B6Ng01-149I16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,054,468 - 69,054,995)(69,170,212 - 69,171,181)
sequence
agaggctcctgtgaatctacatgcccaactggccaagatgtcttccatct
tagccagaagtgtcctcctgttccctgaagggccagtctttttcacctgt
cttttccaggctgcctctccagacacgaagtctgcagcgaccgtgcttac
acacctgtctctgcacataggagctttcctctgatgatgctatttaaatt
cattgagcttggtgcctcatttgtaaagaaggactaataattactccctt
ggtgggtaattataaatgttaaattgcaacatgagaagttattaattaat
tacagccattattatttataacaatgataacagtaagacagatcatttag
cacctaacatactaaagagtgacgcccaaaacattgagtgaaaatcgggc
tggaggcaccattgggacaaatagtagtcctgctcctaagagcaaaggtc
cctgctgtgtcccacattaaagttttggttgctaggttgaaggtttgggg
gtgaggatagagggagaagatt
gaattcttggcggtagccagtgtctcagacgtcagaagcagtccacatgg
tgcccaggcagggagaagaatagaaatttagaggattgtgtcaacatgga
gatggttccaggaactgttctctgatccagaatggagcccccctgtaaga
gataacaaaaatttatctcattacgtccatgtacaggggtgtttttcagc
tttgtggccccaattagcagtaactaattaatcctctaacactttaatgg
ggttgtgagagaggaaataggtccatagaaaaaagtggatttcaactgcc
ctgggaggagttgagatgggattctatcccaaggttttcctgctgcccgt
tggtctttaagagacagtggtccacttcctgtctggacactttgacataa
attctcctaggccaccaagtcttgggaataaagttacactatgggctggg
gaaagcctacatttgctatatttctctgtttgctctcatgttaagtgaga
gacatggcagccctagagccacccagaaaaacatccttttgtgtagtttc
tgagagcaattcagtatgccagtctttttcatgtttattttcagggcagt
gataatggagtgtaataaacaaacaaacaaacaaacaaacaaacaaacaa
acccctccagggaacaccagtgaatttcaatactactttttatccatctg
caaagggcaaactatttagagttctctctgccctgactcaacttagaaac
cccaaacccagcaggaagcacaaccattttgacttggcaaagtgaaccaa
ccaccatgcacctgcaaaccgggcttccccagtgggagtagctgaggaca
gagggtcagtctgttctcagcttcttcctcagaatccgaattctgcaatg
gagaaaatgtacacgcatacacacttcttgcacagactctctctctctct
ctctctctacctctctctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_69054468_69054995
seq2: B6Ng01-149I16.b_49_576

seq1  GAATTCAGAGGCTCCTGTGAATCTACATGCCCAACTGGCCAAGATGTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGGCTCCTGTGAATCTACATGCCCAACTGGCCAAGATGTCTT  50

seq1  CCATCTTAGCCAGAAGTGTCCTCCTGTTCCCTGAAGGGCCAGTCTTTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTTAGCCAGAAGTGTCCTCCTGTTCCCTGAAGGGCCAGTCTTTTTC  100

seq1  ACCTGTCTTTTCCAGGCTGCCTCTCCAGACACGAAGTCTGCAGCGACCGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTCTTTTCCAGGCTGCCTCTCCAGACACGAAGTCTGCAGCGACCGT  150

seq1  GCTTACACACCTGTCTCTGCACATAGGAGCTTTCCTCTGATGATGCTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACACACCTGTCTCTGCACATAGGAGCTTTCCTCTGATGATGCTATT  200

seq1  TAAATTCATTGAGCTTGGTGCCTCATTTGTAAAGAAGGACTAATAATTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTCATTGAGCTTGGTGCCTCATTTGTAAAGAAGGACTAATAATTAC  250

seq1  TCCCTTGGTGGGTAATTATAAATGTTAAATTGCAACATGAGAAGTTATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTGGTGGGTAATTATAAATGTTAAATTGCAACATGAGAAGTTATTA  300

seq1  ATTAATTACAGCCATTATTATTTATAACAATGATAACAGTAAGACAGATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTACAGCCATTATTATTTATAACAATGATAACAGTAAGACAGATC  350

seq1  ATTTAGCACCTAACATACTAAAGAGTGACGCCCAAAACATTGAGTGAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGCACCTAACATACTAAAGAGTGACGCCCAAAACATTGAGTGAAAA  400

seq1  TCGGGCTGGAGGCACCATTGGGACAAATAGTAGTCCTGCTCCTAAGAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGCTGGAGGCACCATTGGGACAAATAGTAGTCCTGCTCCTAAGAGCA  450

seq1  AAGGTCCCTGCTGTGTCCCACATTAAAGTTTTGGTTGCTAGGTTGAAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCCCTGCTGTGTCCCACATTAAAGTTTTGGTTGCTAGGTTGAAGGT  500

seq1  TTGGGGGTGAGGATAGAGGGAGAAGATT  528
      ||||||||||||||||||||||||||||
seq2  TTGGGGGTGAGGATAGAGGGAGAAGATT  528

seq1: chr18_69170212_69171181
seq2: B6Ng01-149I16.g_69_1039 (reverse)

seq1  GAGAGAGAGAGGCAGAGAGAGAGAGAGAGAGAGAGTCTGTGCAAG-AGTG  49
      |||||||||||| |||||||||||||||||||||||||||||||| ||||
seq2  GAGAGAGAGAGGTAGAGAGAGAGAGAGAGAGAGAGTCTGTGCAAGAAGTG  50

seq1  TGTATGCGTGTACATTTTCTCCATTTGCAGAATTCGGATTCTGGAGGAGA  99
      ||||||||||||||||||||||| |||||||||||||||||||  | |||
seq2  TGTATGCGTGTACATTTTCTCCA-TTGCAGAATTCGGATTCTGAGGAAGA  99

seq1  AGCTGAGAACAGACTGACCCTCTGTCCTCAGCTACTCCCACTGGGGAAGC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGAACAGACTGACCCTCTGTCCTCAGCTACTCCCACTGGGGAAGC  149

seq1  CCGGTTTGCAGGTGCATGGTGGTTGGTTCACTTTGCCAAGTCAAAATGGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGTTTGCAGGTGCATGGTGGTTGGTTCACTTTGCCAAGTCAAAATGGT  199

seq1  TGTGCTTCCTGCTGGGTTTGGGGTTTCTAAGTTGAGTCAGGGCAGAGAGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTTCCTGCTGGGTTTGGGGTTTCTAAGTTGAGTCAGGGCAGAGAGA  249

seq1  ACTCTAAATAGTTTGCCCTTTGCAGATGGAT-AAAAGTAGTATTGAAATT  298
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ACTCTAAATAGTTTGCCCTTTGCAGATGGATAAAAAGTAGTATTGAAATT  299

seq1  CACTGGTGTTCCCTGGAGGGGTTTGTTTGTTTGTTTGTTTGTTTGTTTGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGTGTTCCCTGGAGGGGTTTGTTTGTTTGTTTGTTTGTTTGTTTGT  349

seq1  TTGTTTATTACACTCCATTATCACTGCCCTGAAAATAAACATGAAAAAGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTATTACACTCCATTATCACTGCCCTGAAAATAAACATGAAAAAGA  399

seq1  CTGGCATACTGAATTGCTCTCAGAAACTACACAAAAGGATGTTTTTCTGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCATACTGAATTGCTCTCAGAAACTACACAAAAGGATGTTTTTCTGG  449

seq1  GTGGCTCTAGGGCTGCCATGTCTCTCACTTAACATGAGAGCAAACAGAGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTCTAGGGCTGCCATGTCTCTCACTTAACATGAGAGCAAACAGAGA  499

seq1  AATATAGCAAATGTAGGCTTTCCCCAGCCCATAGTGTAACTTTATTCCCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAGCAAATGTAGGCTTTCCCCAGCCCATAGTGTAACTTTATTCCCA  549

seq1  AGACTTGGTGGCCTAGGAGAATTTATGTCAAAGTGTCCAGACAGGAAGTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGGTGGCCTAGGAGAATTTATGTCAAAGTGTCCAGACAGGAAGTG  599

seq1  GACCACTGTCTCTTAAAGACCAACGGGCAGCAGGAAAACCTTGGGATAGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACTGTCTCTTAAAGACCAACGGGCAGCAGGAAAACCTTGGGATAGA  649

seq1  ATCCCATCTCAACTCCTCCCAGGGCAGTTGAAATCCACTTTTTTCTATGG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCATCTCAACTCCTCCCAGGGCAGTTGAAATCCACTTTTTTCTATGG  699

seq1  ACCTATTTCCTCTCTCACAACCCCATTAAAGTGTTAGAGGATTAATTAGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATTTCCTCTCTCACAACCCCATTAAAGTGTTAGAGGATTAATTAGT  749

seq1  TACTGCTAATTGGGGCCACAAAGCTGAAAAACACCCCTGTACATGGACGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCTAATTGGGGCCACAAAGCTGAAAAACACCCCTGTACATGGACGT  799

seq1  AATGAGATAAATTTTTGTTATCTCTTACAGGGGGGCTCCATTCTGGATCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGATAAATTTTTGTTATCTCTTACAGGGGGGCTCCATTCTGGATCA  849

seq1  GAGAACAGTTCCTGGAACCATCTCCATGTTGACACAATCCTCTAAATTTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACAGTTCCTGGAACCATCTCCATGTTGACACAATCCTCTAAATTTC  899

seq1  TATTCTTCTCCCTGCCTGGGCACCATGTGGACTGCTTCTGACGTCTGAGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTCTCCCTGCCTGGGCACCATGTGGACTGCTTCTGACGTCTGAGA  949

seq1  CACTGGCTACCGCCAAGAATTC  970
      ||||||||||||||||||||||
seq2  CACTGGCTACCGCCAAGAATTC  971