BAC Information

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BAC

Clone NameB6Ng01-149N02
Chromosome1 (Build37)18 (Build37)
Map Location 29,507,514 - 29,508,61118,109,261 - 18,109,825
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG665903, Gm597, LOC435614, EG623924
Downstream geneEG433283, LOC100040665, LOC665944
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149N02.bB6Ng01-149N02.g
ACCDH946055DH946056
length1,092897
definitionDH946055|Mus musculus domesticus DNA, BAC clone: B6Ng01-149N02, 5' end.DH946056|Mus musculus domesticus DNA, BAC clone: B6Ng01-149N02, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(29,507,514 - 29,508,611)(18,109,261 - 18,109,825)
sequence
gaattccttgaagatgagaatgtacacaataaggggatatggtagattct
tcctgtgtgacttactttccaataatatgatgttacctaaccaaaattat
gcaacattttatgatcacttgtattacatacttatagccacgggcctatg
aggaatttgagtacatatttctgatacatattacagcaaaggtgtttgca
ataaacacagcttttagtatatcccaattcaaaaaaatgatttcttagct
cactctaataaattcttaaatatataaagctgtttgagtttttataggca
catctaattttcttttataatctaaagcttaagttggaaaaggttcttct
aataaaacacctgatatagtgcagatttataaattattttgtaaaatgtt
tagaaatttaagtcctagtgctttctttaagagataattaaaaaaacagg
aaatataaattagggaaattcctctattatattggaccctatgccttttt
gtggttattaaggattttcttggttgaagtggttgggcccagatccctgt
ggccagttccattgctaggatggtagttctggatttgtattatgaaaaag
caacctgagggatccatcaaaaagcaaggcagcatcatgtactgtcttta
ggtgcctgcttaagttcctgccctgatgaacatctatgataaactaattt
gtaagccaaataaacccatttctactgaaagtggctttggccgttatctt
agttagagctacaattgctataataaaagatcatgaaccaaacatagtcg
ggaaggaactgttttaaagagctgttaaaaaatatttaattctgttctct
gagcaacatatgacttgcttccttccaatatagtagggtatggcatgtgg
cgtttcctcaaggtccaacttattgtctcagatattttatttatgtttta
atatgacaccagtgaaagcttaatttgatacatttctgattttgctggct
accatgctagctctatctttgacataagatttgctttaccaaagaacaat
gtagattattgactttgtaaagaatatcatcagttgcatatt
gaattcttgatctttccaagacttttatcatgatgtgtgttggattttgt
caaatgctttctctgcatctaacgagatgatcatgtagtttttgtctttg
agtttgtttatatagtggattacgttgatggatttccgaatattgagcca
tccctgcattcctgggatgaaacctacttggtcaggatggatgattgttt
tgatgtgttcttggaattggttagggagaactttattgaggatttttgca
tcgatattcataagggaaattggtctgaagttctctatctttgttgggtc
tttctgtggtttaagtatcagagtaattttggcttcataaaatgagttgg
gtagagttccttctgtttctattttgtggaatagtttgtgaagaactggg
gttagattttctttgacggtctgatagaactctgcactacacccatctgt
ccctgggctattttgttgggagactgttaatgactgcttctatttcttta
ggggatataggaatgtttagaccactaacatgatcttgatttaactttgg
tacctggtatctgtctagaaacttgtccatttcattcagattctccagtt
ttgttgattatagccttttgtagaaggatctgatggtgttttggatttct
gcaggctctgttgttatgtgtcctttttcatttctgattttgttaattag
gatgctttccctgtgttctctagtgagtctggctagggtttatctatctt
gtttgattttctcaaagaaccagctcctcatttgggttgattctttgata
gtttttcttgtttccacttggttgattttgcccctgagtttgattaattc
ctggttgtctacttcctctggggtgaaattgctttcctttgttctag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_29507514_29508611
seq2: B6Ng01-149N02.b_47_1138

seq1  GAATTCCTTGAAGATGAGAATGTACACAATAAGGGGATATGGTAGATTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGAAGATGAGAATGTACACAATAAGGGGATATGGTAGATTCT  50

seq1  TCCTGTGTGACTTACTTTCCAATAATATGATGTTACCTAACCAAAATTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGTGACTTACTTTCCAATAATATGATGTTACCTAACCAAAATTAT  100

seq1  GCAACATTTTATGATCACTTGTATTACATACTTATAGCCACGGGCCTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACATTTTATGATCACTTGTATTACATACTTATAGCCACGGGCCTATG  150

seq1  AGGAATTTGAGTACATATTTCTGATACATATTACAGCAAAGGTGTTTGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATTTGAGTACATATTTCTGATACATATTACAGCAAAGGTGTTTGCA  200

seq1  ATAAACACAGCTTTTAGTATATCCCAATTCAAAAAAATGATTTCTTAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACACAGCTTTTAGTATATCCCAATTCAAAAAAATGATTTCTTAGCT  250

seq1  CACTCTAATAAATTCTTAAATATATAAAGCTGTTTGAGTTTTTATAGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTAATAAATTCTTAAATATATAAAGCTGTTTGAGTTTTTATAGGCA  300

seq1  CATCTAATTTTCTTTTATAATCTAAAGCTTAAGTTGGAAAAGGTTCTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAATTTTCTTTTATAATCTAAAGCTTAAGTTGGAAAAGGTTCTTCT  350

seq1  AATAAAACACCTGATATAGTGCAGATTTATAAATTATTTTGTAAAATGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAACACCTGATATAGTGCAGATTTATAAATTATTTTGTAAAATGTT  400

seq1  TAGAAATTTAAGTCCTAGTGCTTTCTTTAAGAGATAATTAAAAAAACAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATTTAAGTCCTAGTGCTTTCTTTAAGAGATAATTAAAAAAACAGG  450

seq1  AAATATAAATTAGGGAAATTCCTCTATTATATTGGACCCTATGCCTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATAAATTAGGGAAATTCCTCTATTATATTGGACCCTATGCCTTTTT  500

seq1  GTGGTTATTAAGGATTTTCTTGGTTGAAGTGGTTGGGCCCAGATCCCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTATTAAGGATTTTCTTGGTTGAAGTGGTTGGGCCCAGATCCCTGT  550

seq1  GGCCAGTTCCATTGCTAGGATGGTAGTTCTGGATTTGTATTATGAAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGTTCCATTGCTAGGATGGTAGTTCTGGATTTGTATTATGAAAAAG  600

seq1  CAACCTGAGGGATCCATCAAAAAGCAAGGCAGCATCATGTACTGTCTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTGAGGGATCCATCAAAAAGCAAGGCAGCATCATGTACTGTCTTTA  650

seq1  GGTGCCTGCTTAAGTTCCTGCCCTGATGAACATCTATGATAAACTAATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCCTGCTTAAGTTCCTGCCCTGATGAACATCTATGATAAACTAATTT  700

seq1  GTAAGCCAAATAAACCCATTTCTACTGAAAGTGGCTTTGGCCGTTATCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGCCAAATAAACCCATTTCTACTGAAAGTGGCTTTGGCCGTTATCTT  750

seq1  AGTTAGAGCTACAATTGCTATAATAAAAGATCATGAACCAAACATAGTCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGAGCTACAATTGCTATAATAAAAGATCATGAACCAAACATAGTCG  800

seq1  GGAAGGAACTGTTTTAAAGAGCTGTTAAAAAATATTTAATTCTGTTCTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAACTGTTTTAAAGAGCTGTTAAAAAATATTTAATTCTGTTCTCT  850

seq1  GAGCAACATATGACTTGCTTCCTTCCAATATAGTAGGGTATGGCATGTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAACATATGACTTGCTTCCTTCCAATATAGTAGGGTATGGCATGTGG  900

seq1  CGTTTCCTCAAGGTCCAACTTATTGTCTCAGATATTTTATTTATGTTTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTCCTCAAGGTCCAACTTATTGTCTCAGATATTTTATTTATGTTTTA  950

seq1  ATATGACACAAGTGAAAGCTTAATTTGATACATTTCTGATTTTGCTGGCT  1000
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATATGACACCAGTGAAAGCTTAATTTGATACATTTCTGATTTTGCTGGCT  1000

seq1  ACCATGCTAGCTCTTATCTATGACATAAAGGATATGCTTTACCAAAGACC  1050
      ||||||||||||| ||||| ||||||||  ||| |||||||||||||| |
seq2  ACCATGCTAGCTC-TATCTTTGACATAA--GATTTGCTTTACCAAAGAAC  1047

seq1  AGTGTAAGATTATTGACTTTGTAAAAGAATATTCATCAGTTGCATATT  1098
      | ||| |||||||||||||||| |||||||| ||||||||||||||||
seq2  AATGT-AGATTATTGACTTTGT-AAAGAATA-TCATCAGTTGCATATT  1092

seq1: chr18_18109261_18109825
seq2: B6Ng01-149N02.g_398_965 (reverse)

seq1  CTAGAACAAAAGGAAGCAAATTCACCCAAGAGG-AGTAGAC-GGCAGGAA  48
      |||||||||| | |||||| ||||||| ||||| |||||||   ||||||
seq2  CTAGAACAAAGGAAAGCAATTTCACCCCAGAGGAAGTAGACAACCAGGAA  50

seq1  ATAATCAAACTCAGGGGCGAAATCAACCAAGTGGAAACAAG---AACTAT  95
       ||||||||||||||||| ||||||||||||||||||||||   ||||| 
seq2  TTAATCAAACTCAGGGGCAAAATCAACCAAGTGGAAACAAGAAAAACTA-  99

seq1  TCAGAGAATCAA-CCAATCGAGGAGCTGGTTCTTTGAGAAAATC-AACAA  143
      ||| |||||||| ||||  ||||||||||||||||||||||||| |||||
seq2  TCAAAGAATCAACCCAAATGAGGAGCTGGTTCTTTGAGAAAATCAAACAA  149

seq1  GGTAGACAAACCCTTAGCCAGACTCACTAGAGGGCACAGGGAAAGCATTC  193
      | |||| |||||| ||||||||||||||||||  |||||||||||||| |
seq2  GATAGATAAACCC-TAGCCAGACTCACTAGAGAACACAGGGAAAGCATCC  198

seq1  TAATTAACAAAATCAGAAATGAAAAGGGAGACATAACAACAGATCCTGAA  243
      ||||||||||||||||||||||||| ||| ||||||||||||| |||| |
seq2  TAATTAACAAAATCAGAAATGAAAAAGGACACATAACAACAGAGCCTGCA  248

seq1  GAAATCCAAAACACCATCAGATCCTTCTACAAAAGGCTATACTCAACAAA  293
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GAAATCCAAAACACCATCAGATCCTTCTACAAAAGGCTATAATCAACAAA  298

seq1  ACTGGAGAACCTGGATGAAATGGAGAAGTTTCTAGACAGATACCAGGTAC  343
      ||||||||| ||| |||||||||| |||||||||||||||||||||||||
seq2  ACTGGAGAATCTGAATGAAATGGACAAGTTTCTAGACAGATACCAGGTAC  348

seq1  CAAAGTTGAATCAAGATCAGGTTAATGATCTAAACAGCCCGATATCCCCC  393
      ||||||| ||||||||||| |||| || ||||||||  || |||||||| 
seq2  CAAAGTTAAATCAAGATCATGTTAGTGGTCTAAACATTCCTATATCCCCT  398

seq1  AAAGAAATAGAAGCAGTCATTAATAGTCTCCCAACCAAAAAAAGCCCAGG  443
      ||||||||||||||||||||||| |||||||||||  |||| ||||||||
seq2  AAAGAAATAGAAGCAGTCATTAACAGTCTCCCAAC--AAAATAGCCCAGG  446

seq1  ACCAGATGGGTTTAGTGCAGAGTTCTATCAGACCTCCAAAGAAGATCTAA  493
        ||||||||| ||||||||||||||||||||||  ||||||| ||||||
seq2  GACAGATGGGTGTAGTGCAGAGTTCTATCAGACCGTCAAAGAAAATCTAA  496

seq1  TCCCAGTTCTTCACAAACTATTCCACAAAATAGAAACAGAAGGTACTCTA  543
       |||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CCCCAGTTCTTCACAAACTATTCCACAAAATAGAAACAGAAGGAACTCTA  546

seq1  CCCAACTCATTCTATGAAGCCA  565
      ||||||||||| ||||||||||
seq2  CCCAACTCATTTTATGAAGCCA  568