BAC Information

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BAC

Clone NameB6Ng01-150O07
Chromosome18 (Build37)
Map Location 59,453,294 - 59,604,671
singlet/doubletdoublet
Overlap gene4833446K15Rik
Upstream geneSlc27a6, Isoc1, Adamts19, A730017C20Rik
Downstream geneLOC667549, EG240327, LOC546714, EG225594, F830016B08Rik, LOC667578, EG667584, LOC435565, Iigp1, EG629292, LOC667597
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150O07.bB6Ng01-150O07.g
ACCDH946854DH946855
length1,1091,085
definitionDH946854|Mus musculus domesticus DNA, BAC clone: B6Ng01-150O07, 5' end.DH946855|Mus musculus domesticus DNA, BAC clone: B6Ng01-150O07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,453,294 - 59,454,414)(59,603,587 - 59,604,671)
sequence
gaattcctccaaggtacagcctcctatcctagggtgtacttcctatatac
tgtcgtagtttcttgcctttagcacatccaaggaattggtggggatctat
gcaagacatattctgagagttcctgattcacagtgcaagatgagctggct
gagtgtgaagtatgtaagaggctgctactgttttcctggtgtaaagggat
caagagaaagatgcacttctgttctgacacgtgatcgggtttgttaatgc
gctcctaaatttgctgtcaaacattattgtttaattacatccatccatcg
gctttttgcttggtgagattccagctttcttgactgaagtgtctgcatca
cagtttcctctcttgtcacatttgtttagcacccacagttttcctaatcc
caaacaatgtccttattcatgctgctttgtattatcataagatcttccca
atatgctttcacttatgtggcattaacacattgttccgtggctcctacca
tggaaaataaacccaaacttggatacacatgtcctgacagtacaccaaca
gaagaggccaagagtctgctctcatttctccatgcttcttcagaccagcc
tattccagtgtttttgtcatatgctctagtcatcacaactttcttttaaa
tattcctgtttctctcttcagtcacagtccacaagaagcatccatgacta
ctgaggatctgacaaagatcttctgttcgtgttgatggtatacactaatc
tattggatgattttaaacactgttttaggtccaatgatttgctagacttc
aaaaattagagtatgatggaaccagagaaggtcttggctgggcactcatc
ttttgaatactaagcgctactgtggagccacaattagtaatggagacgga
atttgaacttgcaaaccttcttgtatgttcggatttatttctatattatt
ttttccctaaaaggactctttcattggaatatttagcattgtagagttat
ttaccccaaggaatgtgctgacaggcccaatcatagcatatttgagaatt
gcctgttactttaacttactctcacctcttattttacattttacattact
tcctaaact
gaattcactaggcaagatgtcatgccaaagggtcaactcttcaatctaga
acagggcaatggcagagtctgaattgagcaactctgaccacaaagaagaa
aggaaagaaagaggaaaacaaacatcagattgtttcacagaaattaaatg
tttaaaaaaattcagataccatttttgccctaatccaaatatttaagatt
gatggagccttagacgatctatttgattggatatgcagtgaaatacatca
aacatggatgccctaatttttgccctaatccaaatatttaagattgatgg
agccttagacgatctatttgattggatatgcagtgaaatacatcaaacat
ggatgcagaaacatggaggaacccactaatggtcaacgtaggtccataat
gtcatagtaagagagaattgtgatttgagctcacatttttcaactattac
aatttataaattgtagagagtgtatttagcttacatcatgatgttgggtc
taaatacaaattttgaaatttcagctcttagtgtttttttttatcatacc
acattgtgactgcattttatttcaaagaaaattttgattgatcataatcc
tcattagagccagaccatgctggatttttgcacatcatggtctcagcaca
gcacttgctgaggtaactagtgagatcaaaaacatttgttaagtgaataa
gaaatgtttgtagcagggagagcttctgtggtggcttaacgaggagccct
caaaatatgtgtatatccaggctcttagaattcaattgtgttctgaaatc
ataattccctgtcagtggtatctttacacagcatcataagacaagattag
ggagatacagctgaatagagagaagatgtcatatgaataaagaaaagact
gaggttgaaactgtaaggccaggaacacccagggatcactagctgtcaat
agaatcaagaaagaagtaaaggaggattcttctcagcatcagtgagatca
tggctctgcctggtgccttggagttgtatatcaacctttaggatcggtgg
aggcatggataactgctcctctagtccattaccta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_59453294_59454414
seq2: B6Ng01-150O07.b_45_1153

seq1  GAATTCCTCCAAGGTACAGCCTCCTATCCTAGGGTGTACTTCCTATATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCAAGGTACAGCCTCCTATCCTAGGGTGTACTTCCTATATAC  50

seq1  TGTCGTAGTTTCTTGCCTTTAGCACATCCAAGGAATTGGTGGGGATCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCGTAGTTTCTTGCCTTTAGCACATCCAAGGAATTGGTGGGGATCTAT  100

seq1  GCAAGACATATTCTGAGAGTTCCTGATTCACAGTGCAAGATGAGCTGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGACATATTCTGAGAGTTCCTGATTCACAGTGCAAGATGAGCTGGCT  150

seq1  GAGTGTGAAGTATGTAAGAGGCTGCTACTGTTTTCCTGGTGTAAAGGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTGAAGTATGTAAGAGGCTGCTACTGTTTTCCTGGTGTAAAGGGAT  200

seq1  CAAGAGAAAGATGCACTTCTGTTCTGACACGTGATCGGGTTTGTTAATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGAAAGATGCACTTCTGTTCTGACACGTGATCGGGTTTGTTAATGC  250

seq1  GCTCCTAAATTTGCTGTCAAACATTATTGTTTAATTACATCCATCCATCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTAAATTTGCTGTCAAACATTATTGTTTAATTACATCCATCCATCG  300

seq1  GCTTTTTGCTTGGTGAGATTCCAGCTTTCTTGACTGAAGTGTCTGCATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTTGCTTGGTGAGATTCCAGCTTTCTTGACTGAAGTGTCTGCATCA  350

seq1  CAGTTTCCTCTCTTGTCACATTTGTTTAGCACCCACAGTTTTCCTAATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCCTCTCTTGTCACATTTGTTTAGCACCCACAGTTTTCCTAATCC  400

seq1  CAAACAATGTCCTTATTCATGCTGCTTTGTATTATCATAAGATCTTCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAATGTCCTTATTCATGCTGCTTTGTATTATCATAAGATCTTCCCA  450

seq1  ATATGCTTTCACTTATGTGGCATTAACACATTGTTCCGTGGCTCCTACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCTTTCACTTATGTGGCATTAACACATTGTTCCGTGGCTCCTACCA  500

seq1  TGGAAAATAAACCCAAACTTGGATACACATGTCCTGACAGTACACCAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAATAAACCCAAACTTGGATACACATGTCCTGACAGTACACCAACA  550

seq1  GAAGAGGCCAAGAGTCTGCTCTCATTTCTCCATGCTTCTTCAGACCAGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGCCAAGAGTCTGCTCTCATTTCTCCATGCTTCTTCAGACCAGCC  600

seq1  TATTCCAGTGTTTTTGTCATATGCTCTAGTCATCACAACTTTCTTTTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCAGTGTTTTTGTCATATGCTCTAGTCATCACAACTTTCTTTTAAA  650

seq1  TATTCCTGTTTCTCTCTTCAGTCACAGTCCACAAGAAGCATCCATGACTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCTGTTTCTCTCTTCAGTCACAGTCCACAAGAAGCATCCATGACTA  700

seq1  CTGAGGATCTGACAAAGATCTTCTGTTCGTGTTGATGGTATACACTAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGATCTGACAAAGATCTTCTGTTCGTGTTGATGGTATACACTAATC  750

seq1  TATTGGATGATTTTAAACACTGTTTTAGGTCCAATGATTTGCTAGACTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGATGATTTTAAACACTGTTTTAGGTCCAATGATTTGCTAGACTTC  800

seq1  AAAAATTAGAGTATGATGGAACCAGAGAAGGTCTTGGCTGGGCACTCATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTAGAGTATGATGGAACCAGAGAAGGTCTTGGCTGGGCACTCATC  850

seq1  TTTTGAATACTAAGCGCTACTGTGGAGCCACAATTAGTAATGGAGACGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAATACTAAGCGCTACTGTGGAGCCACAATTAGTAATGGAGACGGA  900

seq1  ATTTGAACTTGCAAAACCTTCTTGTATGTTCGGATTTATTTCTATATTAT  950
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATTTGAACTTGC-AAACCTTCTTGTATGTTCGGATTTATTTCTATATTAT  949

seq1  TTTTTCCCTAAAAGGAACTCTTTCATTGGAATATTTAGCATTGTAGGAGT  1000
      ||||||||||||||| ||||||||||||||||||||||||||||| ||||
seq2  TTTTTCCCTAAAAGG-ACTCTTTCATTGGAATATTTAGCATTGTA-GAGT  997

seq1  TAATTACCCCCAGGGAATGTGCTGACAGGCCCAATCATAGCATATTTGAG  1050
      || ||| ||||| |||||||||||||||||||||||||||||||||||||
seq2  TATTTA-CCCCAAGGAATGTGCTGACAGGCCCAATCATAGCATATTTGAG  1046

seq1  AATTCTGGCTGTTACTTTTATACTTACTCTCACCTCTTAATTTTACTATT  1100
      |||  || ||||||||||   ||||||||||||||||| |||||||  ||
seq2  AAT--TGCCTGTTACTTT--AACTTACTCTCACCTCTT-ATTTTACATTT  1091

seq1  TACATTTAACTTCCATAAACT  1121
      ||||||  |||||| ||||||
seq2  TACATT--ACTTCC-TAAACT  1109

seq1: chr18_59603587_59604671
seq2: B6Ng01-150O07.g_70_1154 (reverse)

seq1  TAGGTATTGTGACTAGAGGAGCAGGTATTCATTGCCTC--ACGGTCCTAA  48
      |||||| || |||||||||||||| ||| || ||||||   || ||||||
seq2  TAGGTAATG-GACTAGAGGAGCAGTTATCCA-TGCCTCCACCGATCCTAA  48

seq1  AGGTTTGAATACCAACTCCAAGGCA-CAGGCAGAGCCATGATCTCACTGA  97
      |||||   ||| ||||||||||||| ||||||||||||||||||||||||
seq2  AGGTTGATATA-CAACTCCAAGGCACCAGGCAGAGCCATGATCTCACTGA  97

seq1  TGGCTGAAGAAGAATCCTTCTTTACTTCTTTCTTGATTCTA-TGGCAGCT  146
      | |||| ||||||||||| |||||||||||||||||||||| || |||||
seq2  T-GCTG-AGAAGAATCCTCCTTTACTTCTTTCTTGATTCTATTGACAGCT  145

seq1  AGTGAT-CCTGGGTGTTCCTGGCCTTACAGTTTCAACCTCAGTCTTTTTC  195
      |||||| ||||||||||||||||||||||||||||||||||||| |||||
seq2  AGTGATCCCTGGGTGTTCCTGGCCTTACAGTTTCAACCTCAGTC-TTTTC  194

seq1  TTTATTCATATGGCATCTTCTCTCTATTCAGCTGTATCT-CCTAATCTTG  244
      |||||||||||| |||||||||||||||||||||||||| ||||||||||
seq2  TTTATTCATATGACATCTTCTCTCTATTCAGCTGTATCTCCCTAATCTTG  244

seq1  TCTTATGATGCTGTGTAAAGATACCACTGACA-GGAATTATGATTTCAGA  293
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TCTTATGATGCTGTGTAAAGATACCACTGACAGGGAATTATGATTTCAGA  294

seq1  ACACAATTGAATTCTAAGAGCCTGGATATACACATATTTTTGAGGGCTCC  343
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ACACAATTGAATTCTAAGAGCCTGGATATACACATA-TTTTGAGGGCTCC  343

seq1  TCGTTAAGCCACCACAGAAGCTCTCCCTGCTACAAACATTTCTTATTCAC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTAAGCCACCACAGAAGCTCTCCCTGCTACAAACATTTCTTATTCAC  393

seq1  TTAACAAATGTTTTTGATCTCACTAGTTACCTCAGCAAGTGCTGTGCTGA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAAATGTTTTTGATCTCACTAGTTACCTCAGCAAGTGCTGTGCTGA  443

seq1  GACCATGATGTGCAAAAATCCAGCATGGTCTGGCTCTAATGAGGATTATG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATGATGTGCAAAAATCCAGCATGGTCTGGCTCTAATGAGGATTATG  493

seq1  ATCAATCAAAATTTTCTTTGAAATAAAATGCAGTCACAATGTGGTATGAT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATCAAAATTTTCTTTGAAATAAAATGCAGTCACAATGTGGTATGAT  543

seq1  AAAAAAAAACACTAAGAGCTGAAATTTCAAAATTTGTATTTAGACCCAAC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAACACTAAGAGCTGAAATTTCAAAATTTGTATTTAGACCCAAC  593

seq1  ATCATGATGTAAGCTAAATACACTCTCTACAATTTATAAATTGTAATAGT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGATGTAAGCTAAATACACTCTCTACAATTTATAAATTGTAATAGT  643

seq1  TGAAAAATGTGAGCTCAAATCACAATTCTCTCTTACTATGACATTATGGA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAATGTGAGCTCAAATCACAATTCTCTCTTACTATGACATTATGGA  693

seq1  CCTACGTTGACCATTAGTGGGTTCCTCCATGTTTCTGCATCCATGTTTGA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACGTTGACCATTAGTGGGTTCCTCCATGTTTCTGCATCCATGTTTGA  743

seq1  TGTATTTCACTGCATATCCAATCAAATAGATCGTCTAAGGCTCCATCAAT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTCACTGCATATCCAATCAAATAGATCGTCTAAGGCTCCATCAAT  793

seq1  CTTAAATATTTGGATTAGGGCAAAAATTAGGGCATCCATGTTTGATGTAT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAATATTTGGATTAGGGCAAAAATTAGGGCATCCATGTTTGATGTAT  843

seq1  TTCACTGCATATCCAATCAAATAGATCGTCTAAGGCTCCATCAATCTTAA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGCATATCCAATCAAATAGATCGTCTAAGGCTCCATCAATCTTAA  893

seq1  ATATTTGGATTAGGGCAAAAATGGTATCTGAATTTTTTTAAACATTTAAT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGGATTAGGGCAAAAATGGTATCTGAATTTTTTTAAACATTTAAT  943

seq1  TTCTGTGAAACAATCTGATGTTTGTTTTCCTCTTTCTTTCCTTTCTTCTT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGAAACAATCTGATGTTTGTTTTCCTCTTTCTTTCCTTTCTTCTT  993

seq1  TGTGGTCAGAGTTGCTCAATTCAGACTCTGCCATTGCCCTGTTCTAGATT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTCAGAGTTGCTCAATTCAGACTCTGCCATTGCCCTGTTCTAGATT  1043

seq1  GAAGAGTTGACCCTTTGGCATGACATCTTGCCTAGTGAATTC  1085
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGTTGACCCTTTGGCATGACATCTTGCCTAGTGAATTC  1085