BAC Information

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BAC

Clone NameB6Ng01-151B12
Chromosome18 (Build37)
Map Location 73,524,711 - 73,628,306
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC629684, LOC100043411, LOC100042955
Downstream geneRkhd2, Smad4, Elac1, Me2, Mro, Mapk4, 2810433K01Rik, Cxxc1, EG435570, Mbd1, Ccdc11, LOC628298, LOC668124, LOC668126, Myo5b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151B12.bB6Ng01-151B12.g
ACCDH947004DH947005
length1,1141,073
definitionDH947004|Mus musculus domesticus DNA, BAC clone: B6Ng01-151B12, 5' end.DH947005|Mus musculus domesticus DNA, BAC clone: B6Ng01-151B12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,524,711 - 73,525,822)(73,627,768 - 73,628,306)
sequence
gaattccagacgggggtatacagatcagattgctaacgtgggaacttttc
tctgtaattgttgcagagccaaaggaaacagttgatacagaggagacacg
cacacagggagacagaagcattggaatgacagagaaatcagaactctggg
acacccacaacttacctagcagaaagcagggagtaagaatcagtagaaag
tcacacattcccttcatcacaggggaccctaaggtcacctgcatcttata
ctgatgtgggtttaaatgccctaggtttttgccactcccttgctggtgct
gccaaggagctggagagaaccaggattaaagacatttgcccagatacata
gtgattatcagggaattctggacgttgcttctcagatgtggctgactggc
tccagagctgcgatcatggtgaccagcctgcggggctgagctgcgctcct
ggagccaagcaaagtgccactgcccagtccccagatggactttccctggc
tccttaccaagccctgtgataaagcctcaagtcacctcaaggacagtcag
ctttcgaggctagaatagaggctatttatagctaggcccctgctgctggc
gtttccgtccttccaggcagggaacacggggatcctgtgtcacacacctg
tgcagattgctgtagctaagggttttctctgctgcttagttaagaacaaa
gtcacccaagacctaagtgtgtgtgtgtgtgtgtgtgtgtgtgttcgagt
gtgtgcgtgcgaggctgaacaccatgccctgccatgctgtgtaggcatgt
ctgcatacatgtctgcatgtatgtacacacatgtatgcacatgactctac
acatatgtgtttggcaaaatcctggccgaaaaggcatagccattacattc
ccatttttcttgattaacttctattctattgtctaatgtctctagaagca
ggtgttgtctctccagaatttcctcagacagctgaactttgagacagaga
ttggcacctgcagtcaccctgatctcttgaagcatctattttgttcccag
gaatcttcctacccacctatgtaccatgctttagagaagtcttttctctt
gtggaagtcaaagc
gaattccagcccagggatggcaccacccacaatgggccctcccacctttg
atcactaattgagaaaatgccttacagctggatctcatggaggcattttc
tcaagggaggctcctttctcaagggaggctccagcttgtgtcaacttgac
acacaaaaccagccagtaccgcagtgtccattagaggaacagaacttata
gagcagagagattttacagcctgtggtctaaaaatggttgtctaccaaca
gaagtccaagaattcagtaggctgaatgtttcaagtggtcttcagtattc
cccccaaatcccaagcaattagaccctaaggctagtgaaggaagggactt
gcccgagagagcaagaacaaggaggcaaagagaaagatgtctttcttctt
ccatgtgtacatcttgactgccagcagaaggtgtgacccagattaaaggt
ggatcttcccacctcaaagatccagattagaagcaggtattcccacttca
aatgatttcattaagaaaaatccctcacagttatacctagttacttgaat
ttgtgttaattcaactgtaggcaagttgacaacaaagaataactgtcaca
gtattgtcataggcacagagttaataagagttaatagttcactggggttt
tgatttgaatccctccttcaatgattttaaagaacattgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgcccacgtgtacatgtgcatgttgtatggtctac
attttactaggatttggaaatatagttcacaatatgaccaagaagagact
actcaaagaagtgtcagactttgtgctggactgatgttttgtctgcattt
ccagccttcaggaggctagggcaggaggacctggagttagaggtcaactg
gttgtgagagagagactttgtctcaaacaaaccagtcaaaacaaatcttc
cccacagaaagaaaaagaaagctagagagaaaaggtcagcatgtattagg
ccgtttggatctgtgaggggtaacagaatccaccaagggcagcggctcca
acagggtgccatagctggataga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_73524711_73525822
seq2: B6Ng01-151B12.b_47_1160

seq1  GAATTCCAGACGGGGGTATACAGATCAGATTGCTAACGTGGGAACTTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGACGGGGGTATACAGATCAGATTGCTAACGTGGGAACTTTTC  50

seq1  TCTGTAATTGTTGCAGAGCCAAAGGAAACAGTTGATACAGAGGAGACACG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAATTGTTGCAGAGCCAAAGGAAACAGTTGATACAGAGGAGACACG  100

seq1  CACACAGGGAGACAGAAGCATTGGAATGACAGAGAAATCAGAACTCTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGGGAGACAGAAGCATTGGAATGACAGAGAAATCAGAACTCTGGG  150

seq1  ACACCCACAACTTACCTAGCAGAAAGCAGGGAGTAAGAATCAGTAGAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCACAACTTACCTAGCAGAAAGCAGGGAGTAAGAATCAGTAGAAAG  200

seq1  TCACACATTCCCTTCATCACAGGGGACCCTAAGGTCACCTGCATCTTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACATTCCCTTCATCACAGGGGACCCTAAGGTCACCTGCATCTTATA  250

seq1  CTGATGTGGGTTTAAATGCCCTAGGTTTTTGCCACTCCCTTGCTGGTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGTGGGTTTAAATGCCCTAGGTTTTTGCCACTCCCTTGCTGGTGCT  300

seq1  GCCAAGGAGCTGGAGAGAACCAGGATTAAAGACATTTGCCCAGATACATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGGAGCTGGAGAGAACCAGGATTAAAGACATTTGCCCAGATACATA  350

seq1  GTGATTATCAGGGAATTCTGGACGTTGCTTCTCAGATGTGGCTGACTGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTATCAGGGAATTCTGGACGTTGCTTCTCAGATGTGGCTGACTGGC  400

seq1  TCCAGAGCTGCGATCATGGTGACCAGCCTGCGGGGCTGAGCTGCGCTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGCTGCGATCATGGTGACCAGCCTGCGGGGCTGAGCTGCGCTCCT  450

seq1  GGAGCCAAGCAAAGTGCCACTGCCCAGTCCCCAGATGGACTTTCCCTGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCAAGCAAAGTGCCACTGCCCAGTCCCCAGATGGACTTTCCCTGGC  500

seq1  TCCTTACCAAGCCCTGTGATAAAGCCTCAAGTCACCTCAAGGACAGTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTACCAAGCCCTGTGATAAAGCCTCAAGTCACCTCAAGGACAGTCAG  550

seq1  CTTTCGAGGCTAGAATAGAGGCTATTTATAGCTAGGCCCCTGCTGCTGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCGAGGCTAGAATAGAGGCTATTTATAGCTAGGCCCCTGCTGCTGGC  600

seq1  GTTTCCGTCCTTCCAGGCAGGGAACACGGGGATCCTGTGTCACACACCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCGTCCTTCCAGGCAGGGAACACGGGGATCCTGTGTCACACACCTG  650

seq1  TGCAGATTGCTGTAGCTAAGGGTTTTCTCTGCTGCTTAGTTAAGAACAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGATTGCTGTAGCTAAGGGTTTTCTCTGCTGCTTAGTTAAGAACAAA  700

seq1  GTCACCCAAGACCTAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCGAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCCAAGACCTAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCGAGT  750

seq1  GTGTGCGTGCGAGGCTGAACACCATGCCCTGCCATGCTGTGTAGGCATGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCGTGCGAGGCTGAACACCATGCCCTGCCATGCTGTGTAGGCATGT  800

seq1  CTGCATACATGTCTGCATGTATGTACACACATGTATGCACATGACTCTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATACATGTCTGCATGTATGTACACACATGTATGCACATGACTCTAC  850

seq1  ACATATGTGTTTGGCAAAATCCT-GCCGAAAAGGCATAGCCATTACATTC  899
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ACATATGTGTTTGGCAAAATCCTGGCCGAAAAGGCATAGCCATTACATTC  900

seq1  CCATTTTTCTTGAATAACTTCTATTCTATGGTCTAATGTCTCTAGAAGCA  949
      ||||||||||||| ||||||||||||||| ||||||||||||||||||||
seq2  CCATTTTTCTTGATTAACTTCTATTCTATTGTCTAATGTCTCTAGAAGCA  950

seq1  GGTGTTGTCTCCCCAGAATTTCCTCAGACAGCTGAACTTTGAGACAGAGA  999
      ||||||||||| ||||||||||||||||||||||||||||||||||||| 
seq2  GGTGTTGTCTCTCCAGAATTTCCTCAGACAGCTGAACTTTGAGACAGAG-  999

seq1  ATTGCCACCTGCAGTCACCCTG-TCTCCTGAAGCATCTATTTTGTCCCCA  1048
      |||| ||||||||||||||||| |||| ||||||||||||||||| ||||
seq2  ATTGGCACCTGCAGTCACCCTGATCTCTTGAAGCATCTATTTTGTTCCCA  1049

seq1  GGATTCTTCCTACCCACCTATGTA-CATGCTTTAGAGATGTCTGTTCTCA  1097
      ||| |||||||||||||||||||| ||||||||||||| |||| ||||| 
seq2  GGAATCTTCCTACCCACCTATGTACCATGCTTTAGAGAAGTCTTTTCTC-  1098

seq1  TTGTGGAAG-CAAAGC  1112
      ||||||||| ||||||
seq2  TTGTGGAAGTCAAAGC  1114

seq1: chr18_73627768_73628306
seq2: B6Ng01-151B12.g_601_1139 (reverse)

seq1  TCTAACCAGCTATGGCA-CCTGTGTGAGCCGCTGCCCTTGGTGAACTCTG  49
      |||| |||||||||||| |||||  |||||||||||||||||| | ||||
seq2  TCTATCCAGCTATGGCACCCTGTTGGAGCCGCTGCCCTTGGTGGATTCTG  50

seq1  TTACCCCTCACAG-TTCAAACGACCTAATCCATGCTGACCTCTCTCTCT-  97
      ||||||||||||| | |||||| |||||| ||||||||||| | ||||| 
seq2  TTACCCCTCACAGATCCAAACGGCCTAATACATGCTGACCT-TTTCTCTC  99

seq1  TGGCTTTCTTTTTCTTTCTGTTGGGGAAGATTTGTTTTGACTTGTTTGTT  147
      | |||||||||||||||||| ||||||||||||||||||||| ||||| |
seq2  TAGCTTTCTTTTTCTTTCTG-TGGGGAAGATTTGTTTTGACTGGTTTG-T  147

seq1  TTGAGACAAAGTCTCTCTCTACACACCAGGTTGACCTCTAACTCCAGGTC  197
      |||||||||||||||||||| |||| |  |||||||||||||||||||||
seq2  TTGAGACAAAGTCTCTCTCT-CACAACCAGTTGACCTCTAACTCCAGGTC  196

seq1  CTCCTGCCCTAGCCTCCTGAAGGCTGGAAATGCAGACAAAACATCAGTCC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGCCCTAGCCTCCTGAAGGCTGGAAATGCAGACAAAACATCAGTCC  246

seq1  AGCACAAAGTCTGACACTTCTTTGAGTAGTCTCTTCTTGGTCATATTGTG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAAAGTCTGACACTTCTTTGAGTAGTCTCTTCTTGGTCATATTGTG  296

seq1  AACTATATTTCCAAAT-CTAGTAAAATGTAGACCATACAACATGCACATG  346
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AACTATATTTCCAAATCCTAGTAAAATGTAGACCATACAACATGCACATG  346

seq1  TACACGTGGGCACACACACACACACACACACACACACACAATGTTCTTTA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACGTGGGCACACACACACACACACACACACACACACAATGTTCTTTA  396

seq1  AAATCATTGAAGGAGGGATTCAAATCAAAACCCCAGTGAACTATTAACTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATTGAAGGAGGGATTCAAATCAAAACCCCAGTGAACTATTAACTC  446

seq1  TTATTAACTCTGTGCCTATGACAATACTGTGACAGTTATTCTTTGTTGTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAACTCTGTGCCTATGACAATACTGTGACAGTTATTCTTTGTTGTC  496

seq1  AACTTGCCTACAGTTGAATTAACACAAATTCAAGTAACTAGGT  539
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGCCTACAGTTGAATTAACACAAATTCAAGTAACTAGGT  539