BAC Information

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BAC

Clone NameB6Ng01-151C23
Chromosome18 (Build37)
Map Location 3,345,556 - 3,441,054
singlet/doubletdoublet
Overlap geneCul2
Upstream geneLOC664794, Crem, EG621440
Downstream geneEG621501, Bambi, LOC100039273, LOC435549, EG664867, LOC621666, Lyzl1, LOC383374, LOC664909, Map3k8, Papd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151C23.bB6Ng01-151C23.g
ACCDH947074DH947075
length1,177812
definitionDH947074|Mus musculus domesticus DNA, BAC clone: B6Ng01-151C23, 5' end.DH947075|Mus musculus domesticus DNA, BAC clone: B6Ng01-151C23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(3,439,870 - 3,441,054)(3,345,556 - 3,346,086)
sequence
gaattcctaataaaagtccctacaccatagctggtcttcatctcctctga
aaatagccttgtagcatctctttatgctctacctatcaaggtctttctct
gatttaactttttgttcactaagaagtcctggaacatttgttttgttttg
ttgttgttttaaatcaatccttgagggtttgcttcttcctgggtattctg
gtgacctattcatgaaaatacctttgaaagcaggtgtgccagggcacact
tctaattacagaactaagagaggctctgacaggaagaccttttcctatta
gaatacatgatggggaagaggtcaggctggaccacatagcaagacctggg
gaagagaaagagatgagagaaagagaaaggaaaaagaaatggattcaaga
gcaaatattattggccttgaaatcaatcctgtgtcaactccccaggtgcc
agattcacaatgcataccaccacaccaggcagtatttttttttaattgtt
tttaccgtttcctgtggcagcaaacatgacttaatgctaggcacagagct
aggaatctgatatagccttctacgttctgttcattgagaaatgttaagtc
attttcttaagatcagctttgccaagcaaaaaaaaaaaaagaaaaaaaga
aaaaaagatcagctttgccaggcactaagtggagacgaatcattcaacac
attgcagttatctctgttgtactggtgggctggatgcagaactccagccc
tcttgaacaagccaggctctgtaacatctgctcttgcagccggattttgc
cctggttactatgacaacctgatgaaaacactatctctggttcgtggctt
tagtagaaaatcacttgcttgaataggtgaattgctctacttgctgccac
aagaggaagacagatctctaggctggcaagtgtttggttgagatgatgac
aggattgggggacttgcataagagtagtttgccccccaaatccagtgttt
catgagcctagctttgctgacccttctactcttgggcactgccagagtct
ctataatctcatcagactggcatttcacacaccatctaactagaagcttc
agctagacttaattcagaagtggcagaaaacccaaatggcttggaaaaat
ggtagcctttcctatagagtgctgcag

gaattccagtgtggctgcctttctcacatagtttggagtaccatgcctcc
tcaatggatacatatgcccccaagtcatctgagagagtagggagaatacc
gcaatccctgcctggacacatggaacatgaatatcaggaggctgggttat
gtggtataagttaagatgtcagctcaggacctttggaaagttccaggaag
cgccagaacatgaaggcccctcctttccaagaagggagaggttgatggtg
catatagacaccgctccctccctggaagggagaggctgattacattcctc
agaaaaactgcagggcagactgatcattgggccatctgcagatatagtac
caatcagtttaaaggtcacactgtgtgccaatcatattgtgcctacttgc
tgatgctctattctgcccctggaaactatataaaaactagccaaatgagc
cacccggggttgcctctcctttgagtgtaggatgttcccagcacactgga
acaataaactcttgcttttgcatcgatctccagcaccatgtgatccactc
aaggggcggggcaggtggtccccagtagctaaggctcatcagagtcttac
attgttgcttttactgtgggtggtgagacatgcagccgaggttcagctgt
ctttctagacacaatgtgctcctgtaaggaaaaaatatataatggaaaag
actacacatagatgttatccactacaccaacctcagatttggcaggaaaa
atatggatacaaaaacagaatgaggtagagacatggggaaggggctgagg
aagaggggaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_3439870_3441054
seq2: B6Ng01-151C23.b_43_1219 (reverse)

seq1  CTGCAAGCACTCCTAAATAGGAAGGGCTACCATTTTTTTCAAGGCATT--  48
      |||| |||||||    ||||||| |||||||| ||||| |||| ||||  
seq2  CTGC-AGCACTC---TATAGGAAAGGCTACCA-TTTTTCCAAGCCATTTG  45

seq1  GTGTTTCTGCCAC-TCTGAATTAGGTCCTAGCCTGGAGC-TCTAGTTTAG  96
      |  |||||||||| ||||||||| || |||| ||| ||| ||||| ||||
seq2  GGTTTTCTGCCACTTCTGAATTAAGT-CTAG-CTGAAGCTTCTAG-TTAG  92

seq1  AATTGTGTGTGAAATGCCCAGTCTGATGGAGATTATTAGAGACTCTGGCA  146
       || |||||||||||| |||||||||| ||||||| ||||||||||||||
seq2  -ATGGTGTGTGAAATG-CCAGTCTGAT-GAGATTA-TAGAGACTCTGGCA  138

seq1  GTGCCCAGGAGTAGAAGGGTCAGCAAAGGCTAGGCTCATGGAACAACTGG  196
      ||||||| ||||||||||||||||||| |||||||||||| ||| |||||
seq2  GTGCCCAAGAGTAGAAGGGTCAGCAAA-GCTAGGCTCATGAAAC-ACTGG  186

seq1  ATTTGGGGGGCAAACTACTCTTATGCAAGT-CCCCAATCCTGTCATCATC  245
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ATTTGGGGGGCAAACTACTCTTATGCAAGTCCCCCAATCCTGTCATCATC  236

seq1  TCAACC-AACACTTGCCAGCCTAGAGATCTGTCTTCCTCTTGTGGCAGCA  294
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCAAACACTTGCCAGCCTAGAGATCTGTCTTCCTCTTGTGGCAGCA  286

seq1  AGTAGAGCAATTCACCTATTCAAGCAAGTGATTTTCTACTAAAGCCACGA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAGCAATTCACCTATTCAAGCAAGTGATTTTCTACTAAAGCCACGA  336

seq1  ACCAGAGATAGTGTTTTCATCAGGTTGTCATAGTAACCAGGGCAAAATCC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAGATAGTGTTTTCATCAGGTTGTCATAGTAACCAGGGCAAAATCC  386

seq1  GGCTGCAAGAGCAGATGTTACAGAGCCTGGCTTGTTCAAGAGGGCTGGAG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCAAGAGCAGATGTTACAGAGCCTGGCTTGTTCAAGAGGGCTGGAG  436

seq1  TTCTGCATCCAGCCCACCAGTACAACAGAGATAACTGCAATGTGTTGAAT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCATCCAGCCCACCAGTACAACAGAGATAACTGCAATGTGTTGAAT  486

seq1  GATTCGTCTCCACTTAGTGCCTGGCAAAGCTGATCTTTTTTTCTTTTTTT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCGTCTCCACTTAGTGCCTGGCAAAGCTGATCTTTTTTTCTTTTTTT  536

seq1  CTTTTTTTTTTTTTGCTTGGCAAAGCTGATCTTAAGAAAATGACTTAACA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTTTTTTTTGCTTGGCAAAGCTGATCTTAAGAAAATGACTTAACA  586

seq1  TTTCTCAATGAACAGAACGTAGAAGGCTATATCAGATTCCTAGCTCTGTG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAATGAACAGAACGTAGAAGGCTATATCAGATTCCTAGCTCTGTG  636

seq1  CCTAGCATTAAGTCATGTTTGCTGCCACAGGAAACGGTAAAAACAATTAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCATTAAGTCATGTTTGCTGCCACAGGAAACGGTAAAAACAATTAA  686

seq1  AAAAAAATACTGCCTGGTGTGGTGGTATGCATTGTGAATCTGGCACCTGG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATACTGCCTGGTGTGGTGGTATGCATTGTGAATCTGGCACCTGG  736

seq1  GGAGTTGACACAGGATTGATTTCAAGGCCAATAATATTTGCTCTTGAATC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTGACACAGGATTGATTTCAAGGCCAATAATATTTGCTCTTGAATC  786

seq1  CATTTCTTTTTCCTTTCTCTTTCTCTCATCTCTTTCTCTTCCCCAGGTCT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTTTTTCCTTTCTCTTTCTCTCATCTCTTTCTCTTCCCCAGGTCT  836

seq1  TGCTATGTGGTCCAGCCTGACCTCTTCCCCATCATGTATTCTAATAGGAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATGTGGTCCAGCCTGACCTCTTCCCCATCATGTATTCTAATAGGAA  886

seq1  AAGGTCTTCCTGTCAGAGCCTCTCTTAGTTCTGTAATTAGAAGTGTGCCC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCTTCCTGTCAGAGCCTCTCTTAGTTCTGTAATTAGAAGTGTGCCC  936

seq1  TGGCACACCTGCTTTCAAAGGTATTTTCATGAATAGGTCACCAGAATACC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACACCTGCTTTCAAAGGTATTTTCATGAATAGGTCACCAGAATACC  986

seq1  CAGGAAGAAGCAAACCCTCAAGGATTGATTTAAAACAACAACAAAACAAA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGAAGCAAACCCTCAAGGATTGATTTAAAACAACAACAAAACAAA  1036

seq1  ACAAATGTTCCAGGACTTCTTAGTGAACAAAAAGTTAAATCAGAGAAAGA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGTTCCAGGACTTCTTAGTGAACAAAAAGTTAAATCAGAGAAAGA  1086

seq1  CCTTGATAGGTAGAGCATAAAGAGATGCTACAAGGCTATTTTCAGAGGAG  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGATAGGTAGAGCATAAAGAGATGCTACAAGGCTATTTTCAGAGGAG  1136

seq1  ATGAAGACCAGCTATGGTGTAGGGACTTTTATTAGGAATTC  1185
      |||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGACCAGCTATGGTGTAGGGACTTTTATTAGGAATTC  1177


seq1: chr18_3345556_3346086
seq2: B6Ng01-151C23.g_347_877

seq1  AGAGGCTGATTACATTCCTCAGAAAAACTGCAGGGCAGACTGATCATTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCTGATTACATTCCTCAGAAAAACTGCAGGGCAGACTGATCATTGG  50

seq1  GCCATCTGCAGATATAGTACCAATCAGTTTAAAGGTCACACTGTGTGCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCTGCAGATATAGTACCAATCAGTTTAAAGGTCACACTGTGTGCCA  100

seq1  ATCATATTGTGCCTACTTGCTGATGCTCTATTCTGCCCCTGGAAACTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATATTGTGCCTACTTGCTGATGCTCTATTCTGCCCCTGGAAACTATA  150

seq1  TAAAAACTAGCCAAATGAGCCACCCGGGGTTGCCTCTCCTTTGAGTGTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACTAGCCAAATGAGCCACCCGGGGTTGCCTCTCCTTTGAGTGTAG  200

seq1  GATGTTCCCAGCACACTGGAACAATAAACTCTTGCTTTTGCATCGATCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTCCCAGCACACTGGAACAATAAACTCTTGCTTTTGCATCGATCTC  250

seq1  CAGCACCATGTGATCCACTCAAGGGGCGGGGCAGGTGGTCCCCAGTAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACCATGTGATCCACTCAAGGGGCGGGGCAGGTGGTCCCCAGTAGCT  300

seq1  AAGGCTCATCAGAGTCTTACATTGTTGCTTTTACTGTGGGTGGTGAGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTCATCAGAGTCTTACATTGTTGCTTTTACTGTGGGTGGTGAGACA  350

seq1  TGCAGCCGAGGTTCAGCTGTCTTTCTAGACACAATGTGCTCCTGTAAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCCGAGGTTCAGCTGTCTTTCTAGACACAATGTGCTCCTGTAAGGA  400

seq1  AAAAATATATAATGGAAAAGACTACACATAGATGTTATCCACTACACCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATATAATGGAAAAGACTACACATAGATGTTATCCACTACACCAA  450

seq1  CCTCAGATTTGGCAGGAAAAATATGGATACAAAAACAGAATGAGGTAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGATTTGGCAGGAAAAATATGGATACAAAAACAGAATGAGGTAGAG  500

seq1  ACATGGGGAAGGGGCTGAGGAAGAGGGGAGG  531
      |||||||||||||||||||||||||||||||
seq2  ACATGGGGAAGGGGCTGAGGAAGAGGGGAGG  531


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