BAC Information

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BAC

Clone NameB6Ng01-151O10
Chromosome18 (Build37)
Map Location 24,123,750 - 24,269,398
singlet/doubletdoublet
Overlap geneC230097I24Rik, Zfp35, Zfp191, D030070L09Rik
Upstream geneNol4, LOC100040579, LOC665797, Dtna, Mapre2, EG665813, LOC100040623, Zfp397
Downstream geneGalnt1, LOC665586, 2700062C07Rik, BC021395, Slc39a6, Epl2, Mocos, Fhod3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151O10.bB6Ng01-151O10.g
ACCDH947607DH947608
length1,1031,125
definitionDH947607|Mus musculus domesticus DNA, BAC clone: B6Ng01-151O10, 5' end.DH947608|Mus musculus domesticus DNA, BAC clone: B6Ng01-151O10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(24,268,287 - 24,269,398)(24,123,750 - 24,124,883)
sequence
gaattcatagaaatacatgcttgggtcaaggtgtttgttctcttaagtgc
taacttgctgtgaacttggcctctgtatggtggtgttgagcctagagagg
tgggcctggtgaattaatgatgtttcttacaaatgggtcacatatgggtc
agatcccataggaatggacctgtttctgtgggagagggctgtcatgagaa
aagcctctttttttttttcctcttctttctgtatatacatgccttccctg
tgcttggcctgttctcttcacaccatgttgaaatgcagccagtggggcct
tcaccaggatgccaacattgagagtttactaagcctcttttcttcttaaa
aaaaaaaaaaaagtgtatacatatgtatacacacttgatatgtggaagtg
tttagcctacatgtgtgtatgtgcactgtgtgtgtgcctggtaccctctg
agggtaccctctggagctgggtatccagcaggtgctcctaaccattgcgc
catccccagccccataagtctcatttctctataaagcacccaagtatttt
ttgaatagcaccacagaataaactagaagactgctccagctttctttttg
tgtgtttgcatgtcatatctgccatgcagtgggtgtttgtttgtttgttt
gtttgtttccctttgtctgtatttttgtattcagaatagtttcttgtaga
gagggtcttgctttgtacccatctgacagtctgaccccagatgctagctc
taccaggttcacatttccagtggccattagtgtgagtttaatctaccgcc
ctctgtgtgcctttgtcccttgctttgggtcttctatcagtcttactggc
actttaaacactttggagtggttttagcttacagtgaaactgagaggcta
tttctggggagttctcacagactccagatttagctcatctgtaaacgact
atggtacatttgttcttgattgagaccagtacgatggcattgttccagtt
tattttactttgctagtttggaccacacagagcccagtgataagcttgtc
tcagtgccaggtgttggattcctagtacatcaacatgggttgggggtggg
aga
gaattctcctatgcctaatgagccctgtgttgctcccaaaagcttttcca
cagtcacaacatttatacggtttttcaccactgtgaattctctgatgtct
tacaaggtctgctctgaaaccaaaggcctttccacattctttacatgcat
aaggtctctctccagtgtgacttctctggtgtctaataagttttgatcta
ttgcaaaaagttttcccacaatctacacacgcatagagcagtttccctgt
gtgagttgtgggccgtgtagtaccatgtaagttttgactagggatcctat
caccttcattacactcaaagatgttctgttctatagggggtttcttgtta
aaggttgccaaactgaaatagtcttcctgagaagaaagctgacttgtttt
gttgcttgtatcatcacttcctctttgcttctcattgttgtccagacatt
ccatagtttcttcaactatctgtactggagaagtttccctaggaagtctt
cctggagatgccatggccactgatgcaacacattcaataatttcttgctt
tgctgtcaatattttcccagtcaccatcttgctatctaaaaatatgaata
ggatttatctttttttttttttcatgttaaaaaaagtgttagagaagaaa
caacaagtaaaccaaaggaaaagataagtgctgggtctggagaggtagct
tagtgatttaagagtgcatatttcgtcttgcagaagacccacttcagttt
ctagaacccacatggtggctcacaaccatacctaacttcagttccaggag
ctccaacatcgttttcttgcctctatgggacaagtcatgcaggtggtgca
tgtatagacatacagacaaacatgcaaacttttttcaaaacaaacaggga
tggacatacagacaaatgacagagtattttgcaaacacaagccctgggtt
tgatcttcagattagggaagggatatggctgggaaatgacaattagcttc
ccatatagaatatagcaccccacagagtaaatggacaagaacgtaagtca
gttattggaagatctgagtatgaacaagaaaaaaaaacttagagtgacaa
tatgtctaatcagccatagccagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_24268287_24269398
seq2: B6Ng01-151O10.b_47_1149 (reverse)

seq1  TCTCCCACCCCC-ACCCATGTTGATGGTACTAGGGATCAAACCACCCTGT  49
      |||||||||||| |||||||||||| |||||||| ||| |||   |||| 
seq2  TCTCCCACCCCCAACCCATGTTGAT-GTACTAGGAATCCAAC--ACCTG-  46

seq1  GCACTGAGACAAAGCTTTATCACTGGGCTCTGTGTGGTCCCAAACTAAGC  99
      |||||||||| |||| |||||||||||||||||||||| ||||||| |||
seq2  GCACTGAGAC-AAGC-TTATCACTGGGCTCTGTGTGGT-CCAAACT-AGC  92

seq1  AAAGTAAAATAAACTGGAAACAATGCCATCCTTACTGGTTCTCCAATC-A  148
      ||||||||||||||||| ||||||||||| | |||||| ||| ||||| |
seq2  AAAGTAAAATAAACTGG-AACAATGCCAT-CGTACTGG-TCT-CAATCAA  138

seq1  GAACAAATGTACCATAGTCGTTTACAGATGAGCTAAATCTGGAGTCTGTG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAATGTACCATAGTCGTTTACAGATGAGCTAAATCTGGAGTCTGTG  188

seq1  AGAACTCCCCAG-AATAGCCTCTCAGTTTCACTGTAAGCTAAAACCACTC  247
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGAACTCCCCAGAAATAGCCTCTCAGTTTCACTGTAAGCTAAAACCACTC  238

seq1  CAAAGTGTTTAAAGTGCCCAGTTAGACTGATAGAAGA-CCAAAGCAAGGG  296
      |||||||||||||||| ||||| |||||||||||||| ||||||||||||
seq2  CAAAGTGTTTAAAGTG-CCAGTAAGACTGATAGAAGACCCAAAGCAAGGG  287

seq1  ACAAAGGCACACAGAGGGCGGTAGATTAAACTCACACTAATGGCCACTGG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGGCACACAGAGGGCGGTAGATTAAACTCACACTAATGGCCACTGG  337

seq1  AAATGTGAACCTGGTAGAGCTAGCATCTGGGGTCAGACTGTCAGATGGGT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGAACCTGGTAGAGCTAGCATCTGGGGTCAGACTGTCAGATGGGT  387

seq1  ACAAAGCAAGACCCTCTCTACAAGAAACTATTCTGAATACAAAAATACAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGCAAGACCCTCTCTACAAGAAACTATTCTGAATACAAAAATACAG  437

seq1  ACAAAGGGAAACAAACAAACAAACAAACAAACACCCACTGCATGGCAGAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGGGAAACAAACAAACAAACAAACAAACACCCACTGCATGGCAGAT  487

seq1  ATGACATGCAAACACACAAAAAGAAAGCTGGAGCAGTCTTCTAGTTTATT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACATGCAAACACACAAAAAGAAAGCTGGAGCAGTCTTCTAGTTTATT  537

seq1  CTGTGGTGCTATTCAAAAAATACTTGGGTGCTTTATAGAGAAATGAGACT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGTGCTATTCAAAAAATACTTGGGTGCTTTATAGAGAAATGAGACT  587

seq1  TATGGGGCTGGGGATGGCGCAATGGTTAGGAGCACCTGCTGGATACCCAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGGCTGGGGATGGCGCAATGGTTAGGAGCACCTGCTGGATACCCAG  637

seq1  CTCCAGAGGGTACCCTCAGAGGGTACCAGGCACACACACAGTGCACATAC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGAGGGTACCCTCAGAGGGTACCAGGCACACACACAGTGCACATAC  687

seq1  ACACATGTAGGCTAAACACTTCCACATATCAAGTGTGTATACATATGTAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGTAGGCTAAACACTTCCACATATCAAGTGTGTATACATATGTAT  737

seq1  ACACTTTTTTTTTTTTTTTAAGAAGAAAAGAGGCTTAGTAAACTCTCAAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTTTTTTTTTTTTTTAAGAAGAAAAGAGGCTTAGTAAACTCTCAAT  787

seq1  GTTGGCATCCTGGTGAAGGCCCCACTGGCTGCATTTCAACATGGTGTGAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCATCCTGGTGAAGGCCCCACTGGCTGCATTTCAACATGGTGTGAA  837

seq1  GAGAACAGGCCAAGCACAGGGAAGGCATGTATATACAGAAAGAAGAGGAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACAGGCCAAGCACAGGGAAGGCATGTATATACAGAAAGAAGAGGAA  887

seq1  AAAAAAAAAGAGGCTTTTCTCATGACAGCCCTCTCCCACAGAAACAGGTC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAGAGGCTTTTCTCATGACAGCCCTCTCCCACAGAAACAGGTC  937

seq1  CATTCCTATGGGATCTGACCCATATGTGACCCATTTGTAAGAAACATCAT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTATGGGATCTGACCCATATGTGACCCATTTGTAAGAAACATCAT  987

seq1  TAATTCACCAGGCCCACCTCTCTAGGCTCAACACCACCATACAGAGGCCA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCACCAGGCCCACCTCTCTAGGCTCAACACCACCATACAGAGGCCA  1037

seq1  AGTTCACAGCAAGTTAGCACTTAAGAGAACAAACACCTTGACCCAAGCAT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCACAGCAAGTTAGCACTTAAGAGAACAAACACCTTGACCCAAGCAT  1087

seq1  GTATTTCTATGAATTC  1112
      ||||||||||||||||
seq2  GTATTTCTATGAATTC  1103

seq1: chr18_24123750_24124883
seq2: B6Ng01-151O10.g_69_1193

seq1  GAATTCTCCTATGCCTAATGAGCCCTGTGTTGCTCCCAAAAGCTTTTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTATGCCTAATGAGCCCTGTGTTGCTCCCAAAAGCTTTTCCA  50

seq1  CAGTCACAACATTTATACGGTTTTTCACCACTGTGAATTCTCTGATGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCACAACATTTATACGGTTTTTCACCACTGTGAATTCTCTGATGTCT  100

seq1  TACAAGGTCTGCTCTGAAACCAAAGGCCTTTCCACATTCTTTACATGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGGTCTGCTCTGAAACCAAAGGCCTTTCCACATTCTTTACATGCAT  150

seq1  AAGGTCTCTCTCCAGTGTGACTTCTCTGGTGTCTAATAAGTTTTGATCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCTCTCTCCAGTGTGACTTCTCTGGTGTCTAATAAGTTTTGATCTA  200

seq1  TTGCAAAAAGTTTTCCCACAATCTACACACGCATAGAGCAGTTTCCCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAAAAGTTTTCCCACAATCTACACACGCATAGAGCAGTTTCCCTGT  250

seq1  GTGAGTTGTGGGCCGTGTAGTACCATGTAAGTTTTGACTAGGGATCCTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTTGTGGGCCGTGTAGTACCATGTAAGTTTTGACTAGGGATCCTAT  300

seq1  CACCTTCATTACACTCAAAGATGTTCTGTTCTATAGGGGGTTTCTTGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTCATTACACTCAAAGATGTTCTGTTCTATAGGGGGTTTCTTGTTA  350

seq1  AAGGTTGCCAAACTGAAATAGTCTTCCTGAGAAGAAAGCTGACTTGTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTGCCAAACTGAAATAGTCTTCCTGAGAAGAAAGCTGACTTGTTTT  400

seq1  GTTGCTTGTATCATCACTTCCTCTTTGCTTCTCATTGTTGTCCAGACATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTTGTATCATCACTTCCTCTTTGCTTCTCATTGTTGTCCAGACATT  450

seq1  CCATAGTTTCTTCAACTATCTGTACTGGAGAAGTTTCCCTAGGAAGTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGTTTCTTCAACTATCTGTACTGGAGAAGTTTCCCTAGGAAGTCTT  500

seq1  CCTGGAGATGCCATGGCCACTGATGCAACACATTCAATAATTTCTTGCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAGATGCCATGGCCACTGATGCAACACATTCAATAATTTCTTGCTT  550

seq1  TGCTGTCAATATTTTCCCAGTCACCATCTTGCTATCTAAAAATATGAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTCAATATTTTCCCAGTCACCATCTTGCTATCTAAAAATATGAATA  600

seq1  GGATTTATCTTTTTTTTTTTTTCATGTTAAAAAAAGTGTTAGAGAAGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTATCTTTTTTTTTTTTTCATGTTAAAAAAAGTGTTAGAGAAGAAA  650

seq1  CAACAAGTAAACCAAAGGAAAAGATAAGTGCTGGGTCTGGAGAGGTAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAGTAAACCAAAGGAAAAGATAAGTGCTGGGTCTGGAGAGGTAGCT  700

seq1  TAGTGATTTAAGAGTGCATA-TTCGTCTTGCAGAAGACCCACTTCAGTTT  749
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TAGTGATTTAAGAGTGCATATTTCGTCTTGCAGAAGACCCACTTCAGTTT  750

seq1  CTAGAACCCACATGGTGGCTCACAACCATACCTAACTTCAGTTCCAGGAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAACCCACATGGTGGCTCACAACCATACCTAACTTCAGTTCCAGGAG  800

seq1  CTCCAACATCGTTTTCTTGCCTCTATGGGACAAGTCATGCAGGTGGTGCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAACATCGTTTTCTTGCCTCTATGGGACAAGTCATGCAGGTGGTGCA  850

seq1  TGTATAGACATACAGACAAACATGCAAACTTTTTTCAAAACAAAACAGGG  899
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGTATAGACATACAGACAAACATGCAAACTTTTTTCAAAAC-AAACAGGG  899

seq1  ATGGACATACAGACAAATGACAGAGTA-TTTGCAAACACAAGGCCCTGGG  948
      ||||||||||||||||||||||||||| ||||||||||||| ||||||||
seq2  ATGGACATACAGACAAATGACAGAGTATTTTGCAAACACAA-GCCCTGGG  948

seq1  TTTGATCTTCAGGATTAGGGAAGGGATATGGCTGGGGAAATGACAATTAG  998
      ||||||||||| ||||||||||||||||||||| ||||||||||||||||
seq2  TTTGATCTTCA-GATTAGGGAAGGGATATGGCT-GGGAAATGACAATTAG  996

seq1  CTTCCCAATATAGAATATAGCACCCACGAGAGTAAAATGGACAAGGAACG  1048
      |||||| ||||||||||||||||||   ||||| |||||||||| |||||
seq2  CTTCCC-ATATAGAATATAGCACCCCACAGAGT-AAATGGACAA-GAACG  1043

seq1  TAAGTCAG-TATT-GAAGATACTGAGTAGTGAACAAGAAAAAAAATACTT  1096
      |||||||| |||| |||||| ||||||| |||||||||||||||| ||||
seq2  TAAGTCAGTTATTGGAAGAT-CTGAGTA-TGAACAAGAAAAAAAA-ACTT  1090

seq1  AGAGGTGACAAATAGTTCATACCAGCCATAAGCCAGAA  1134
      ||| ||||| ||||  ||  | ||||||| ||||||||
seq2  AGA-GTGAC-AATATGTCTAATCAGCCAT-AGCCAGAA  1125