BAC Information

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BAC

Clone NameB6Ng01-153N16
Chromosome18 (Build37)19 (Build37)
Map Location 67,415,617 - 67,416,7107,108,008 - 7,108,102
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneCcbe1, Pmaip1, LOC100042852, Mc4r, Gnal, Chmp1b, Mppe1
Downstream geneImpa2, B430212C06Rik, Cidea, Tubb6, Afg3l2, Slmo1, Spire1, Cep76, Tnfsf5ip1, Ptpn2, Seh1l, LOC667939, D18Ertd653e
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153N16.bB6Ng01-153N16.g
ACCDH949050DH949051
length1,09095
definitionDH949050|Mus musculus domesticus DNA, BAC clone: B6Ng01-153N16, 5' end.DH949051|Mus musculus domesticus DNA, BAC clone: B6Ng01-153N16, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(67,415,617 - 67,416,710)(7,108,008 - 7,108,102)
sequence
gaattcaaggccaacttggtctagtgagttccagcttagccaaggataca
tagtgagatcctgtgtaaaataaattataaattctagttataaaagacat
acaatccaggtattttatttacaaggtttaagtctaggctgggcaggttt
tgagctattctaacttacatgtcagccatatgtcccttgttacctgctgt
ttctcctggccatgatctatgccctctaatggtgcccctcccaaccccat
tttcccttcctcctgaaacccacagccaggtaactgaaaacccacctacc
tccatctactgccaatcacaggccttttattgactagttcacttggggag
caaggttattcagcatcacttggtatatgagaggatctccttgtcagggc
aaccagatcttcagttatttagcatttgaatacatagtagcatgagacca
acccccctacatccagtctcaaaaaaaaaaaaaaaaatcaatgttgggag
tgtagtcagtggcagagggcttgcctggaaagtgtgaggccttagatcca
actgcatcactgaaaaatatagcagagagcttatgctttttcttttgtct
tgaatcatattttcattacatatcatatgctcatgccgaaaagtattttg
ttagtctctgcagtgatgatgtgcacacaaatgagaatcaagtgtttcag
gaagacaaagctgtaggtgtttaacaatttccttctccatagcccagagc
aaggctgcggtgaagacttctgtccgtaatggagaacattcctgcttcag
gaaacattggagagaagatggagctgtcttgcagaagtgaaatcacaagt
tcctaactgagagcagcttgtatttttggcatgctatgctcttcctaggc
acagacggagaagcaacatcctcaattcccatcaaaataagctgcaactt
ttttttttccatgaaacactagtcctgttacctgtgctttgtttgagcac
tgtgtgattttttcagatgtagttgtgcgaaagaatttaacatgctgggc
acgtgatgatacctttctgtgaatcccagcccctggggtg
caggacagccagggctacacagagaaaccctgtctcaaaaaaacaaacaa
acaaacaaaaaacaaaaacaaaaaaaaagaaagaaagaaatcctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_67415617_67416710
seq2: B6Ng01-153N16.b_50_1139 (reverse)

seq1  CACCCCAGGGGCTGGGA-TCACAGAAGTGTATCATCACCGTGCCCAGCAC  49
      ||||||||||||||||| ||||||||  ||||||||| ||||||||||| 
seq2  CACCCCAGGGGCTGGGATTCACAGAAAGGTATCATCA-CGTGCCCAGCA-  48

seq1  TGTTAAATTCTTTCCGCACCACTACATCTGAAATACACAGCACAGTGCCT  99
      ||||||||||||| ||||| ||||||||||||| |  || ||||||| ||
seq2  TGTTAAATTCTTT-CGCACAACTACATCTGAAAAAATCA-CACAGTG-CT  95

seq1  CAAACAAAGCACAGGTAACAGGACTTAGGTGTTTCATGGAAAAAAAAAAG  149
      |||||||||||||||||||||||||   ||||||||||||||||||||||
seq2  CAAACAAAGCACAGGTAACAGGACT--AGTGTTTCATGGAAAAAAAAAAG  143

seq1  TTGGCAGCTTATTTTGATGGGGATTTGAGGATGTTGCTTCTCCGTCTGTG  199
      || ||||||||||||||| |||| ||||||||||||||||||||||||||
seq2  TT-GCAGCTTATTTTGAT-GGGAATTGAGGATGTTGCTTCTCCGTCTGTG  191

seq1  CCTAGG-AGAGCATAGCATGCCAAAAATAC-AGCTGCTCTCAGTTAGGAA  247
      |||||| ||||||||||||||||||||||| |||||||||||||||||||
seq2  CCTAGGAAGAGCATAGCATGCCAAAAATACAAGCTGCTCTCAGTTAGGAA  241

seq1  CTTGTGATTTCACTTCTGC-AGACAGCTCCATCTTCTCTCCAATGTTTCC  296
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTTGTGATTTCACTTCTGCAAGACAGCTCCATCTTCTCTCCAATGTTTCC  291

seq1  TGAAGCAGGAATGTTCTCCATTACGGACAGAAGTCTTCACCGCAGCCTTG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCAGGAATGTTCTCCATTACGGACAGAAGTCTTCACCGCAGCCTTG  341

seq1  CTCTGGGCTATGGAGAAGGAAATTGTTAAACACCTACAGCTTTGTCTTCC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGGCTATGGAGAAGGAAATTGTTAAACACCTACAGCTTTGTCTTCC  391

seq1  TG-AACACTTGATTCTCATTTGTGTGCACATCATCACTGCAGAGACTAAC  445
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACACTTGATTCTCATTTGTGTGCACATCATCACTGCAGAGACTAAC  441

seq1  AAAATACTTTTCGGCATGAGCATATGATATGTAATGAAAATATGATTCAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACTTTTCGGCATGAGCATATGATATGTAATGAAAATATGATTCAA  491

seq1  GACAAAAGAAAAAGCATAAGCTCTCTGCTATATTTTTCAGTGATGCAGTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAAGAAAAAGCATAAGCTCTCTGCTATATTTTTCAGTGATGCAGTT  541

seq1  GGATCTAAGGCCTCACACTTTCCAGGCAAGCCCTCTGCCACTGACTACAC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTAAGGCCTCACACTTTCCAGGCAAGCCCTCTGCCACTGACTACAC  591

seq1  TCCCAACATTGATTTTTTTTTTTTTTTTTGAGACTGGATGTAGGGGGGTT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAACATTGATTTTTTTTTTTTTTTTTGAGACTGGATGTAGGGGGGTT  641

seq1  GGTCTCATGCTACTATGTATTCAAATGCTAAATAACTGAAGATCTGGTTG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCATGCTACTATGTATTCAAATGCTAAATAACTGAAGATCTGGTTG  691

seq1  CCCTGACAAGGAGATCCTCTCATATACCAAGTGATGCTGAATAACCTTGC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGACAAGGAGATCCTCTCATATACCAAGTGATGCTGAATAACCTTGC  741

seq1  TCCCCAAGTGAACTAGTCAATAAAAGGCCTGTGATTGGCAGTAGATGGAG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAAGTGAACTAGTCAATAAAAGGCCTGTGATTGGCAGTAGATGGAG  791

seq1  GTAGGTGGGTTTTCAGTTACCTGGCTGTGGGTTTCAGGAGGAAGGGAAAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTGGGTTTTCAGTTACCTGGCTGTGGGTTTCAGGAGGAAGGGAAAA  841

seq1  TGGGGTTGGGAGGGGCACCATTAGAGGGCATAGATCATGGCCAGGAGAAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTTGGGAGGGGCACCATTAGAGGGCATAGATCATGGCCAGGAGAAA  891

seq1  CAGCAGGTAACAAGGGACATATGGCTGACATGTAAGTTAGAATAGCTCAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGGTAACAAGGGACATATGGCTGACATGTAAGTTAGAATAGCTCAA  941

seq1  AACCTGCCCAGCCTAGACTTAAACCTTGTAAATAAAATACCTGGATTGTA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGCCCAGCCTAGACTTAAACCTTGTAAATAAAATACCTGGATTGTA  991

seq1  TGTCTTTTATAACTAGAATTTATAATTTATTTTACACAGGATCTCACTAT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTTATAACTAGAATTTATAATTTATTTTACACAGGATCTCACTAT  1041

seq1  GTATCCTTGGCTAAGCTGGAACTCACTAGACCAAGTTGGCCTTGAATTC  1094
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCCTTGGCTAAGCTGGAACTCACTAGACCAAGTTGGCCTTGAATTC  1090

seq1: chr19_7108008_7108102
seq2: B6Ng01-153N16.g_73_170

seq1  TTCCAGGACAGTCAGGGCTACACAGAGAAACCCTGTCTCAAACAAACAAA  50
      ||||||||||| |||||||||||||||||||||||||||||| |||||||
seq2  TTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCAAAAAAACAAA  50

seq1  CAAACAAACAAACAA-ACAAACAAAAAGAAAGAAA-AAAG-AATCCTG  95
      |||||||||||| || | ||||||||| ||||||| |||| |||||||
seq2  CAAACAAACAAAAAACAAAAACAAAAAAAAAGAAAGAAAGAAATCCTG  98