BAC Information

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BAC

Clone NameB6Ng01-154B10
Chromosome18 (Build37)
Map Location 28,652,191 - 28,653,307
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665646, EG271505, EG625997
Downstream geneBC051408, LOC100040930, 4930578E11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154B10.bB6Ng01-154B10.g
ACCDH949227DH949228
length1,2111,104
definitionDH949227|Mus musculus domesticus DNA, BAC clone: B6Ng01-154B10, 5' end.DH949228|Mus musculus domesticus DNA, BAC clone: B6Ng01-154B10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccatttattaatggggttatctgatt
ttctggagtccaccttcttgagttcttcatatatattggatattagttcc
ctatctgatttaagatgggtaaagatcctttcccaaaattttggtggcct
ttttgtcttattgacagtgtcttttgccttgcagaagctttgaagtttca
tgaggtcccatttgtcaattcttgatcttacagaacaagccattgctatt
ctattcaggaatttttcctcggtgcccatattttcgaagaaataaataag
tttcagtgtctctggttttatgtggagttccttcatccacttagatttga
ccttagtgcaaggagatgggaatggatcaactcacattcttctacacgat
aactgccagttgtgccaacaccatttgttgaagatgctgtcctttttcca
ctggatggtttttgctcccttgtcaaacatcaagtgaccataggtgtgtg
ggttcatctctgggtcttcaattctgttccattggtctacttgtctgtcg
ctataccagtaccatgcagtttttatcacaattgctctgtagtaaagctt
taggtcagtcatggtgattccaccagaggttcttttatccttgagaagag
tttttgctgtcctaggttttttgttattccagatgaatctgctgattgcc
ctttctaattcattgaagaattgagttggaattttgatggggattgcatt
gaatctgcagattgcttttggcaagatagccatttttacagtgttgatcc
tgccaatccatgagcatgggagatctttccaacttctgagatcttctata
atttctttcttcagagacttgcagtttcttgtattacagatctctcactt
ccttagttagagtcacaccaaggttattttatagtatttgtgactattga
gaaggtgttgtttcactaactactctcagcctgtttattctttatgtgag
aaagccatttgacttgtttgagttaattttatatccagctacttcattga
gctgttatcagtttaggagttccctggtgaaattttaggtgactttatta
tactatcatatatgtaacaataggaaatttcccctctgcccatatattca
aggctttacccctctcttaaagtccaggactctctggattatgtgaagta
ctcttaaatca
gaattctaatgatctaaaataggtaatctttatagatgaataaactggct
taaagggccaaatgctacctagaaagtcatatagaaataactggaaatta
aataggagcccaggtcttttcaacacataacctgagattttagccatatt
taacaaagagccaaaataaaccttaaagaattcttttcctttgtttatca
attttgctatcgtaccctgcagccaaatggtctttcagaatataaatgta
ttaacatcatcctagatcatatagaatgcagaatactactatattgtatt
gatgagtttttaaaaatttttagtcatttggttaatatcaagtatatctt
attttatgttactctcttattcagggtttctatagcagtgataaaacacc
atggcaaaaagcaacttggggaggaaaggccctatttcagctcacagttc
tcaggtcccaatccaccactgagagaaggaacagcagaaacataatgcaa
caatctcgagacagggactgaagcagaagccaaagaggtgtacatctact
ggcttgctccccatgggttggttatcttacatcatgtagaacacaaaaag
tgtgattttcttcagtgggatgaaccttcccacatcacagtcattaaact
gcctcacagacaatctactttattaacctaggttctccttcctagataac
tctgatttgtgtcatttatcgaaaatcgagccagaacagttaccaaaact
gtgttgtgtgatggactatgcgtatagatctccttcacaatatgacatct
ttcacaaaagctgtattgcttgccacgtgggcagacataaaaaatacaaa
gggcttgaaatcatacccaatggccagacttaaagctttgttctcttgaa
actgctcatctctctaataacacctacttatgtatgtgtatttaaatgaa
atcccagattacaccattgagttacaaagcaaatagaagacataacgtgg
ggaaagactttggggaggagagggacttggcagggtactgttatgatgtc
attactcctttccacttagcttctgcaactctaggagacaggcaagctga
agat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_28652191_28653307
seq2: B6Ng01-154B10.g_69_1172 (reverse)

seq1  ATCTCTCAGCTGCCCTGTCTCCTAGAGTTGCAGAAGCTAAGGTGGGACAG  50
      |||| ||||||  ||||||||||||||||||||||||||||   ||| ||
seq2  ATCT-TCAGCTTGCCTGTCTCCTAGAGTTGCAGAAGCTAAG--TGGAAAG  47

seq1  GAGTAATGACCAATCATAACAGTTACCCCTGCCAAGTCCCTCTCCTCCCC  100
      ||||||||||  |||||||||||   ||||||||||||||||||||||||
seq2  GAGTAATGAC--ATCATAACAGT--ACCCTGCCAAGTCCCTCTCCTCCCC  93

seq1  AAAGGTCTTTTCCCCACGTTTATGTCTTCTATTTTGCTTTGTAACTCAAT  150
      ||| ||| |||||||||| |||||||||||| ||||||||||||||||||
seq2  AAA-GTC-TTTCCCCACG-TTATGTCTTCTA-TTTGCTTTGTAACTCAAT  139

seq1  GGTGTAATCTGGGATTTCATTTTAAATACACATACATAAGTAGGTGTTAT  200
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GGTGTAATCTGGGATTTCA-TTTAAATACACATACATAAGTAGGTGTTAT  188

seq1  TAGAGGAGATGAGCAGTTTCAAGAGAACAAAGCTTTAAGTCTGGCCATTG  250
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGA-GAGATGAGCAGTTTCAAGAGAACAAAGCTTTAAGTCTGGCCATTG  237

seq1  GGTATGATTTCAAGCCCTTTGTATTTTTTATGTCTGCCCACGTGGCAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGATTTCAAGCCCTTTGTATTTTTTATGTCTGCCCACGTGGCAAGC  287

seq1  AATACAGCTTTTGTGAAAGATGTCATATTGTGAAGGAGATCTATACGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAGCTTTTGTGAAAGATGTCATATTGTGAAGGAGATCTATACGCAT  337

seq1  AGTCCATCACACAACACAGTTTTGGTAACTGTTCTGGCTCGATTTTCGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCATCACACAACACAGTTTTGGTAACTGTTCTGGCTCGATTTTCGAT  387

seq1  AAATGACACAAATCAGAGTTATCTAGGAAGGAGAACCTAGGTTAATAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGACACAAATCAGAGTTATCTAGGAAGGAGAACCTAGGTTAATAAAG  437

seq1  TAGATTGTCTGTGAGGCAGTTTAATGACTGTGATGTGGGAAGGTTCATCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTGTCTGTGAGGCAGTTTAATGACTGTGATGTGGGAAGGTTCATCC  487

seq1  CACTGAAGAAAATCACACTTTTTGTGTTCTACATGATGTAAGATAACCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAAGAAAATCACACTTTTTGTGTTCTACATGATGTAAGATAACCAA  537

seq1  CCCATGGGGAGCAAGCCAGTAGATGTACACCTCTTTGGCTTCTGCTTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGGGGAGCAAGCCAGTAGATGTACACCTCTTTGGCTTCTGCTTCAG  587

seq1  TCCCTGTCTCGAGATTGTTGCATTATGTTTCTGCTGTTCCTTCTCTCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGTCTCGAGATTGTTGCATTATGTTTCTGCTGTTCCTTCTCTCAGT  637

seq1  GGTGGATTGGGACCTGAGAACTGTGAGCTGAAATAGGGCCTTTCCTCCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGATTGGGACCTGAGAACTGTGAGCTGAAATAGGGCCTTTCCTCCCC  687

seq1  AAGTTGCTTTTTGCCATGGTGTTTTATCACTGCTATAGAAACCCTGAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGCTTTTTGCCATGGTGTTTTATCACTGCTATAGAAACCCTGAATA  737

seq1  AGAGAGTAACATAAAATAAGATATACTTGATATTAACCAAATGACTAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTAACATAAAATAAGATATACTTGATATTAACCAAATGACTAAAA  787

seq1  ATTTTTAAAAACTCATCAATACAATATAGTAGTATTCTGCATTCTATATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAAAAACTCATCAATACAATATAGTAGTATTCTGCATTCTATATG  837

seq1  ATCTAGGATGATGTTAATACATTTATATTCTGAAAGACCATTTGGCTGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGGATGATGTTAATACATTTATATTCTGAAAGACCATTTGGCTGCA  887

seq1  GGGTACGATAGCAAAATTGATAAACAAAGGAAAAGAATTCTTTAAGGTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTACGATAGCAAAATTGATAAACAAAGGAAAAGAATTCTTTAAGGTTT  937

seq1  ATTTTGGCTCTTTGTTAAATATGGCTAAAATCTCAGGTTATGTGTTGAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGCTCTTTGTTAAATATGGCTAAAATCTCAGGTTATGTGTTGAAA  987

seq1  AGACCTGGGCTCCTATTTAATTTCCAGTTATTTCTATATGACTTTCTAGG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTGGGCTCCTATTTAATTTCCAGTTATTTCTATATGACTTTCTAGG  1037

seq1  TAGCATTTGGCCCTTTAAGCCAGTTTATTCATCTATAAAGATTACCTATT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATTTGGCCCTTTAAGCCAGTTTATTCATCTATAAAGATTACCTATT  1087

seq1  TTAGATCATTAGAATTC  1117
      |||||||||||||||||
seq2  TTAGATCATTAGAATTC  1104