BAC Information

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BAC

Clone NameB6Ng01-154G03
Chromosome18 (Build37)
Map Location 55,564,301 - 55,709,799
singlet/doubletdoublet
Overlap genenone
Upstream geneEG545257, LOC100042489, Zfp608, LOC100043089
Downstream geneLOC667401, LOC667409, LOC629043, LOC100043099, LOC629057, LOC100043104, LOC676543, LOC667432, Gramd3, LOC667458, Aldh7a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154G03.bB6Ng01-154G03.g
ACCDH949442DH949443
length631624
definitionDH949442|Mus musculus domesticus DNA, BAC clone: B6Ng01-154G03, 5' end.DH949443|Mus musculus domesticus DNA, BAC clone: B6Ng01-154G03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(55,564,301 - 55,564,865)(55,709,176 - 55,709,799)
sequence
gaattcatcatttttaatagctgagtactactccattgtgtaaatgtacc
acattttctgtatctaatcctctgttgaaggacatctcagttctttccag
cttgtggctattataaataaggctgctatgaacatagtggagcatgtgtc
cttattacaagttggaacatcttctgggtgtatgcccaggtgatgtattg
ctggatctttgggtagtactatgtccaattttctgaggaatcaccaaact
gatttccagagtggttgtaccagtttgcaatcccaccaacaatggaggag
tgttcctctttctccacatcctcgccagcatctgctgtcacctgaatttt
ttaccttagccattctgactggtatgaggtggaatctcagggtcgctttg
atttgcatttcccagatgactaaggatgttgaacatttctttaagtgctt
ctcggccatgcaagattcctcaaaactcattcttttaattcaacatatat
tgctgaacacccacagtgtgccagaaattctctaattttcaggaataaaa
cattaaacaaaatgaagtcctcacatagttgagaaagttaggaagtaaaa
tgtgctacgttttcatggggggtggggggtg
gaattccacttttcatcctaccttcttgtgtttacatgaactttcttttg
catttcagagaccttatggaaagattcccccgctgaccccggggaggagt
gaggaatttctccatcaagtgcgtattgatgagctgcaaagttcagtgaa
caggaaaattctgctccttttattgtcgatgtgacaggttactttattac
catgcctttcacggcaatttaacagttaccctggtaacggattcggtgag
gtaatgtgatcacaggcattagagcccaggcaggctggccgctctctctc
ccagcagccatctgctggctgatgttccaagggctgggtgcctggagggg
ccctggcagccagggcctgaatggcaataagcaggtgaaataggctggcc
ctatttagctgcactctggtgatttctttctctaattctattgaaataat
aatcaggatttgtttctgattaattaactaaccttttggtaaaaagatta
gataacgaaattgctgcctattcagagataatgagatttttattactctg
tcaaaagaagaagaaaaaaagtacattatgtgtcaccagccagccgctat
atcaacgggggcggggggggggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_55564301_55564865
seq2: B6Ng01-154G03.b_109_673

seq1  ATCCTCTGTTGAAGGACATCTCAGTTCTTTCCAGCTTGTGGCTATTATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCTGTTGAAGGACATCTCAGTTCTTTCCAGCTTGTGGCTATTATAA  50

seq1  ATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTATTACAAGTTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTATTACAAGTTGGA  100

seq1  ACATCTTCTGGGTGTATGCCCAGGTGATGTATTGCTGGATCTTTGGGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTCTGGGTGTATGCCCAGGTGATGTATTGCTGGATCTTTGGGTAG  150

seq1  TACTATGTCCAATTTTCTGAGGAATCACCAAACTGATTTCCAGAGTGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATGTCCAATTTTCTGAGGAATCACCAAACTGATTTCCAGAGTGGTT  200

seq1  GTACCAGTTTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCAGTTTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCA  250

seq1  CATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTTACCTTAGCCATTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTTACCTTAGCCATTCT  300

seq1  GACTGGTATGAGGTGGAATCTCAGGGTCGCTTTGATTTGCATTTCCCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGTATGAGGTGGAATCTCAGGGTCGCTTTGATTTGCATTTCCCAGA  350

seq1  TGACTAAGGATGTTGAACATTTCTTTAAGTGCTTCTCGGCCATGCAAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTAAGGATGTTGAACATTTCTTTAAGTGCTTCTCGGCCATGCAAGAT  400

seq1  TCCTCAAAACTCATTCTTTTAATTCAACATATATTGCTGAACACCCACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAAAACTCATTCTTTTAATTCAACATATATTGCTGAACACCCACAG  450

seq1  TGTGCCAGAAATTCTCTAATTTTCAGGAATAAAACATTAAACAAAATGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCAGAAATTCTCTAATTTTCAGGAATAAAACATTAAACAAAATGAA  500

seq1  GTCCTCACATAGTTGAGAAAGTTAGGAAGTAAAATGTGCTACGTTTTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCACATAGTTGAGAAAGTTAGGAAGTAAAATGTGCTACGTTTTCAT  550

seq1  GGGGGGTGGGGGGTG  565
      |||||||||||||||
seq2  GGGGGGTGGGGGGTG  565

seq1: chr18_55709176_55709799
seq2: B6Ng01-154G03.g_66_689 (reverse)

seq1  CTCCCCCCCCCCGCCCCCGTTGATATAGCGGCTGGCTGGTGACACATAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCCCCCCGCCCCCGTTGATATAGCGGCTGGCTGGTGACACATAAT  50

seq1  GTACTTTTTTTCTTCTTCTTTTGACAGAGTAATAAAAATCTCATTATCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTTTTTTCTTCTTCTTTTGACAGAGTAATAAAAATCTCATTATCTC  100

seq1  TGAATAGGCAGCAATTTCGTTATCTAATCTTTTTACCAAAAGGTTAGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAGGCAGCAATTTCGTTATCTAATCTTTTTACCAAAAGGTTAGTTA  150

seq1  ATTAATCAGAAACAAATCCTGATTATTATTTCAATAGAATTAGAGAAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATCAGAAACAAATCCTGATTATTATTTCAATAGAATTAGAGAAAGA  200

seq1  AATCACCAGAGTGCAGCTAAATAGGGCCAGCCTATTTCACCTGCTTATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACCAGAGTGCAGCTAAATAGGGCCAGCCTATTTCACCTGCTTATTG  250

seq1  CCATTCAGGCCCTGGCTGCCAGGGCCCCTCCAGGCACCCAGCCCTTGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCAGGCCCTGGCTGCCAGGGCCCCTCCAGGCACCCAGCCCTTGGAA  300

seq1  CATCAGCCAGCAGATGGCTGCTGGGAGAGAGAGCGGCCAGCCTGCCTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGCCAGCAGATGGCTGCTGGGAGAGAGAGCGGCCAGCCTGCCTGGG  350

seq1  CTCTAATGCCTGTGATCACATTACCTCACCGAATCCGTTACCAGGGTAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAATGCCTGTGATCACATTACCTCACCGAATCCGTTACCAGGGTAAC  400

seq1  TGTTAAATTGCCGTGAAAGGCATGGTAATAAAGTAACCTGTCACATCGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAATTGCCGTGAAAGGCATGGTAATAAAGTAACCTGTCACATCGAC  450

seq1  AATAAAAGGAGCAGAATTTTCCTGTTCACTGAACTTTGCAGCTCATCAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAGGAGCAGAATTTTCCTGTTCACTGAACTTTGCAGCTCATCAAT  500

seq1  ACGCACTTGATGGAGAAATTCCTCACTCCTCCCCGGGGTCAGCGGGGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCACTTGATGGAGAAATTCCTCACTCCTCCCCGGGGTCAGCGGGGGAA  550

seq1  TCTTTCCATAAGGTCTCTGAAATGCAAAAGAAAGTTCATGTAAACACAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCATAAGGTCTCTGAAATGCAAAAGAAAGTTCATGTAAACACAAG  600

seq1  AAGGTAGGATGAAAAGTGGAATTC  624
      ||||||||||||||||||||||||
seq2  AAGGTAGGATGAAAAGTGGAATTC  624