BAC Information

Click to search

BAC

Clone NameB6Ng01-154G22
Chromosome18 (Build37)
Map Location 14,137,196 - 14,138,286
singlet/doubletsinglet
Overlap genenone
Upstream geneImpact, Hrh4, EG383354, LOC665379, LOC100040358, Zfp521
Downstream geneLOC100040094, LOC100040103, LOC100040391, LOC382096, LOC100040129, EG623867, Ss18, LOC100040446, Psma8, Taf4b, LOC669965, Kctd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154G22.bB6Ng01-154G22.g
ACCDH949478DH949479
length7141,070
definitionDH949478|Mus musculus domesticus DNA, BAC clone: B6Ng01-154G22, 5' end.DH949479|Mus musculus domesticus DNA, BAC clone: B6Ng01-154G22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatctcaaatggctgagaagcacttaaatgttct
acatccttagacagtgaaatgcaaatctaaacagccctgagattccacct
cacaccagtcagaatggctaagattaaaaattcaggtgacagcagatgct
ggtgggaacgtggaaaaagggaaacactcctccattgctggtgggattgc
aagctggtacagccactctggaagtcagtctggtggttcttcagaaaatt
ggaaatagttctaccagctataccactcctgggcatgtatccaaatgata
ctccaacatataacaaggacatacattccactgtgttcttagcagtctta
tttataatagccagaagctggaaacaacccagatgtccctcaacagagga
atggatacagaaaatttgatacatttacacagtggaatactactcagcta
catgacttcataagatttgcagggaaatggatggaattagaagatatctt
cctgagtgaggtaacccagtcacaaaagaacacacatggtacgtactcac
tgataagccaacatagaagcctggaatacccatgacacaactcacagacc
atatgaaacccaagaaagaaagaaaactacaccaaagtgtgggtgcgaca
gtacagagtaaagagaatcaactctgggaagtaaagagagagggggagga
tctgggaagggaga

gaattctctcatctccctcctgtcccacagtcccatagaaggagacctgg
gatcacagataacacaggtaaggacagaagtcaggccatcgggcttgcca
gcaccatccatcacaggatttgggggacaatgctctgctttcatccatgt
ttgtgtattgtaaagaattaaatgcaatagactgcttgcttccccaagac
ctagaaatggatgctgtcttttgtatggactcacagtttgcaaagagcta
caacacaacaaagctacccatctgtgatactttgctaagcagcacctagc
tcctccttgatggttctggaggctcttggtgtatttttggtaaaactgaa
tgaatatttatgaaagttcattattactgtaatgaagacgtgcagagatg
ccaattaatagagaatcccgacgagaactgttacatcccctaagtttcca
ccacagaccgtccattcttgtctgccgtcgataactacactgctgttgaa
aattgtgatgacttcatcctccttgatgtaaaatgccccaaatcaaaagt
aaataaatctttgtatgtaagtctctaacctctaattttttttagtccat
taaaccagctgagatccttttaaccccggttcatgatcctatgttcctac
ttggtgaattacagagaagtttgccacctggtcaaaacagatcaggaagg
cactagatacaaaatgggagactgggaaagtgagaggtagccttccttct
tagtcttgtgttcatgttatgaagaattgatgtctttcatacaactaatg
acgtttgtcgtccaaaccagggacttttacaaacacagttcatggtaaat
atagagtcaatctcctcttgaaatgaaaagtctaagtagaaagttcctgt
ccaagttcttggtttaatgtattccctccttccattgctgccctcttaac
acagactgagtcagcagtgctcaggagtacccagtactgcagctaggact
agttaatcctggaccacaggtgggaggaggactgactggaagagtttctt
ctgacctcccccgccatgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_14137196_14138286
seq2: B6Ng01-154G22.g_67_1136

seq1  GAATTCTCTCATCTCCCTCCTGTCCCACAGTCCCATAGAAGGAGACCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCATCTCCCTCCTGTCCCACAGTCCCATAGAAGGAGACCTGG  50

seq1  GATCACAGATAACACAGGTAAGGACAGAAGTCAGGCCATCGGGCTTGCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACAGATAACACAGGTAAGGACAGAAGTCAGGCCATCGGGCTTGCCA  100

seq1  GCACCATCCATCACAGGATTTGGGGGACAATGCTCTGCTTTCATCCATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCATCCATCACAGGATTTGGGGGACAATGCTCTGCTTTCATCCATGT  150

seq1  TTGTGTATTGTAAAGAATTAAATGCAATAGACTGCTTGCTTCCCCAAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTATTGTAAAGAATTAAATGCAATAGACTGCTTGCTTCCCCAAGAC  200

seq1  CTAGAAATGGATGCTGTCTTTTGTATGGACTCACAGTTTGCAAAGAGCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAATGGATGCTGTCTTTTGTATGGACTCACAGTTTGCAAAGAGCTA  250

seq1  CAACACAACAAAGCTACCCATCTGTGATACTTTGCTAAGCAGCACCTAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACAACAAAGCTACCCATCTGTGATACTTTGCTAAGCAGCACCTAGC  300

seq1  TCCTCCTTGATGGTTCTGGAGGCTCTTGGTGTATTTTTGGTAAAACTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTTGATGGTTCTGGAGGCTCTTGGTGTATTTTTGGTAAAACTGAA  350

seq1  TGAATATTTATGAAAGTTCATTATTACTGTAATGAAGACGTGCAGAGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATTTATGAAAGTTCATTATTACTGTAATGAAGACGTGCAGAGATG  400

seq1  CCAATTAATAGAGAATCCCGACGAGAACTGTTACATCCCCTAAGTTTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTAATAGAGAATCCCGACGAGAACTGTTACATCCCCTAAGTTTCCA  450

seq1  CCACAGACCGTCCATTCTTGTCTGCCGTCGATAACTACACTGCTGTTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGACCGTCCATTCTTGTCTGCCGTCGATAACTACACTGCTGTTGAA  500

seq1  AATTGTGATGACTTCATCCTCCTTGATGTAAAATGCCCCAAATCAAAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTGATGACTTCATCCTCCTTGATGTAAAATGCCCCAAATCAAAAGT  550

seq1  AAATAAATCTTTGTATGTAAGTCTCTAACCTCTAATTTTTTTTAGTCCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATCTTTGTATGTAAGTCTCTAACCTCTAATTTTTTTTAGTCCAT  600

seq1  TAAACCAGCTGAGATCCTTTTAACCCCGGTTCATGATCCTATGTTCCTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCAGCTGAGATCCTTTTAACCCCGGTTCATGATCCTATGTTCCTAC  650

seq1  TTGGTGAATTACAGAGAAGTTTGCCACCTGGTCAAAACAGATCAGGAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGAATTACAGAGAAGTTTGCCACCTGGTCAAAACAGATCAGGAAGG  700

seq1  CACTAGATACAAAATGGGAGACTGGGAAAGTGAGAGGTAGCCTTCCTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGATACAAAATGGGAGACTGGGAAAGTGAGAGGTAGCCTTCCTTCT  750

seq1  TAGTCTTGTGTTCATGTTATGAAGAATTGATGTCTTTCATACAACTAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTTGTGTTCATGTTATGAAGAATTGATGTCTTTCATACAACTAATG  800

seq1  ACGTTTGTCGTCCAAACCAGGGACTTTTACAAACACAGTTCATGGTAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTTGTCGTCCAAACCAGGGACTTTTACAAACACAGTTCATGGTAAAT  850

seq1  ATAGAGTCAATCTCCTCTTGAAATGAAAAGTCTAAGTAGAAAGTTCCTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGTCAATCTCCTCTTGAAATGAAAAGTCTAAGTAGAAAGTTCCTGT  900

seq1  CCAAGTTCTTGGTTTAATGTATTCCCTCCTTCCATTGCTGCCCCTCCTTA  950
      |||||||||||||||||||||||||||||||||||||||| |||||  | 
seq2  CCAAGTTCTTGGTTTAATGTATTCCCTCCTTCCATTGCTG-CCCTC--TT  947

seq1  AACACAGACTGAGGTCCAGCAAGTGGCTCAGGAGGTAACCCAGTTACTGC  1000
      |||||||||||||   |||| ||| |||||||||   |||||| ||||||
seq2  AACACAGACTGAG--TCAGC-AGT-GCTCAGGAG--TACCCAG-TACTGC  990

seq1  CAAGCTTAGGACCTAAGTTTAATCCCTGGGACCCACAGGTGGGAGGAGGG  1050
        ||| ||||| |||   ||||| |||||   ||||||||||||||||| 
seq2  --AGC-TAGGA-CTA--GTTAAT-CCTGG--ACCACAGGTGGGAGGAGG-  1030

seq1  AACTGACTGAGAGAGGTTGTCTTCTGA-CTCCCACG-CATGTG  1091
       ||||||||  ||||  | |||||||| ||||| || ||||||
seq2  -ACTGACTGGAAGAG--TTTCTTCTGACCTCCCCCGCCATGTG  1070


| Home | SequenceCutter | Blast | Download |