BAC Information

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BAC

Clone NameB6Ng01-156E12
Chromosome18 (Build37)
Map Location 22,899,784 - 23,022,887
singlet/doubletdoublet
Overlap geneNol4
Upstream gene4921528I01Rik, LOC546708, LOC100040547, Asxl3
Downstream geneLOC100040579, LOC665797, Dtna, Mapre2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156E12.bB6Ng01-156E12.g
ACCDH950827DH950828
length4701,091
definitionDH950827|Mus musculus domesticus DNA, BAC clone: B6Ng01-156E12, 5' end.DH950828|Mus musculus domesticus DNA, BAC clone: B6Ng01-156E12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,899,784 - 22,900,259)(23,021,780 - 23,022,887)
sequence
atggagcattctcatcgccattattcagaacattacccccaagtcaaaag
ggagatggatcttctgcactagatttgtcttgtgttctccttttaaaggg
aaaatatgtttcttgaaacataagcaatgaatctcttaaaaggggaaaaa
tggaaagaaaagaggaagggaggaaggaagatagagggagaggagaggga
aatctaaatggaaagctaacttttcttttttttttttttctggttttttc
gagatagggtttctctgtgtagccctggctctcctggaactcactttgta
gatcaggctggcctcaaacccagaaatctgcctgtctctgcctcccaagt
actgtgattaaaggcgtgcgccaccaccgcccctcgaaagctaccttttt
tagaaatattattttatgaaaagtaagttggtttctatgtatatgtatag
atttatttaattctaaagtt
gaattctctgttttgtttagaccttcctgtgtccttctgtgagatactct
gcttagtaaggacacaccagcttcttttttaaaaattattgattatttta
tttatttacatttaaaatcttacatccttcttggtttcccttctgcaagc
cccctatcccatccttcctctccctgcttctatgagggtgatccttcact
cacccacccactcccacctcactgcactagcattgacatctgctgaagca
ttcagtctctgctctactctttgttcctgtatttcctttagacaggaaaa
attctggataaatatttttgacatgggtagctggccccttccctaaacca
gggaccatgcctaacctctggatatggtctctacatgttctctctcccct
tttttgggtatttcagctaatgccatcccctttgagtcctgagagcctct
tgctttcctggcatctgggactttctggagactacccccagcacaaacgc
tttattcaatccttcacatttatatgaggttacatattctgaggtttaaa
gaaaaagaggactggatgtctaagaaatgtctttgtgattaaggatgtag
tacagcagataaagaatgggttttctgcatatataaagcctttataatga
ggaggtcaggatttttcacattctgcatctcattcccatccagggatttt
tttttctatagaatttgccccagactcatgcaaataatcatgtctatggt
tatatagacaccatccttgctctctctgaatagtcattttctctacagtg
tggttagttacctttctattgcttatgtataattttagtgacatttgtat
tgtttatttgtagtcccagttacctttctattgctgtgaccaaacaccat
gggccaaggcatttataaaatattagggttcacaattgcaaagtgtttaa
gtcatgagtacactgtgggaagcttggcagcaggttgcagtcatggtgct
agagcatattaggagcttcacatatgatcacattgaatgctgtaggactg
cagctgtacgactactctgaatgagttggtgtcctcagaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_22899784_22900259
seq2: B6Ng01-156E12.b_51_526

seq1  GAATTCATGGAGCATTCTCATCGCCATTATTCAGAACATTACCCCCAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGAGCATTCTCATCGCCATTATTCAGAACATTACCCCCAAGT  50

seq1  CAAAAGGGAGATGGATCTTCTGCACTAGATTTGTCTTGTGTTCTCCTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGGGAGATGGATCTTCTGCACTAGATTTGTCTTGTGTTCTCCTTTT  100

seq1  AAAGGGAAAATATGTTTCTTGAAACATAAGCAATGAATCTCTTAAAAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGAAAATATGTTTCTTGAAACATAAGCAATGAATCTCTTAAAAGGG  150

seq1  GAAAAATGGAAAGAAAAGAGGAAGGGAGGAAGGAAGATAGAGGGAGAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATGGAAAGAAAAGAGGAAGGGAGGAAGGAAGATAGAGGGAGAGGA  200

seq1  GAGGGAAATCTAAATGGAAAGCTAACTTTTCTTTTTTTTTTTTTTCTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAAATCTAAATGGAAAGCTAACTTTTCTTTTTTTTTTTTTTCTGGT  250

seq1  TTTTTCGAGATAGGGTTTCTCTGTGTAGCCCTGGCTCTCCTGGAACTCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCGAGATAGGGTTTCTCTGTGTAGCCCTGGCTCTCCTGGAACTCAC  300

seq1  TTTGTAGATCAGGCTGGCCTCAAACCCAGAAATCTGCCTGTCTCTGCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAGATCAGGCTGGCCTCAAACCCAGAAATCTGCCTGTCTCTGCCTC  350

seq1  CCAAGTACTGTGATTAAAGGCGTGCGCCACCACCGCCCCTCGAAAGCTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTACTGTGATTAAAGGCGTGCGCCACCACCGCCCCTCGAAAGCTAC  400

seq1  CTTTTTTAGAAATATTATTTTATGAAAAGTAAGTTGGTTTCTATGTATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTAGAAATATTATTTTATGAAAAGTAAGTTGGTTTCTATGTATAT  450

seq1  GTATAGATTTATTTAATTCTAAAGTT  476
      ||||||||||||||||||||||||||
seq2  GTATAGATTTATTTAATTCTAAAGTT  476

seq1: chr18_23021780_23022887
seq2: B6Ng01-156E12.g_68_1158 (reverse)

seq1  TTTCTGAAGAACCACCAAACTCATTTCCAGAGTAGTCGTACCAGCTTGCA  50
      ||||||| ||  |||| ||||||||  ||||||||||||| |||| ||||
seq2  TTTCTGAGGA--CACC-AACTCATT--CAGAGTAGTCGTA-CAGC-TGCA  43

seq1  GTCCTACCAGCATTCCATTGTTGATCAATATGTG-AGCTCCTTAATATTG  99
      |||||| |||||||| ||   ||||| ||||||| |||||| ||||| ||
seq2  GTCCTA-CAGCATTCAAT--GTGATC-ATATGTGAAGCTCC-TAATA-TG  87

seq1  CTCTAGCACCATGACTGCAACCCTGCTGCCAAGCTTCCCACAGTGGTACT  149
      |||||||||||||||||||| ||||||||||||||||||||||| |||||
seq2  CTCTAGCACCATGACTGCAA-CCTGCTGCCAAGCTTCCCACAGT-GTACT  135

seq1  CATGGACTTAAACACTTTGCAATTGTGAACCCCTAATTATTTTATAAATT  199
      ||| ||||||||||||||||||||||||| |||||| ||||||||||| |
seq2  CAT-GACTTAAACACTTTGCAATTGTGAA-CCCTAA-TATTTTATAAA-T  181

seq1  GCCTTGG-CCATGGTGTTTGGTCACAGCAATAGAAAGGTAACTGGGACTA  248
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGGCCCATGGTGTTTGGTCACAGCAATAGAAAGGTAACTGGGACTA  231

seq1  CAAATAAACAATACAAATGTCACTAAAATTATACATAAGCAATAGAAAGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAAACAATACAAATGTCACTAAAATTATACATAAGCAATAGAAAGG  281

seq1  TAACTAACCACACTGTAGAGAAAATGACTATTCAGAGAGAGCAAGGATGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAACCACACTGTAGAGAAAATGACTATTCAGAGAGAGCAAGGATGG  331

seq1  TGTCTATATAACCATAGACATGATTATTTGCATGAGTCTGGGGCAAATTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTATATAACCATAGACATGATTATTTGCATGAGTCTGGGGCAAATTC  381

seq1  TATAGAAAAAAAAATCCCTGGATGGGAATGAGATGCAGAATGTGAAAAAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAAAAAAAAATCCCTGGATGGGAATGAGATGCAGAATGTGAAAAAT  431

seq1  CCTGACCTCCTCATTATAAAGGCTTTATATATGCAGAAAACCCATTCTTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACCTCCTCATTATAAAGGCTTTATATATGCAGAAAACCCATTCTTT  481

seq1  ATCTGCTGTACTACATCCTTAATCACAAAGACATTTCTTAGACATCCAGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCTGTACTACATCCTTAATCACAAAGACATTTCTTAGACATCCAGT  531

seq1  CCTCTTTTTCTTTAAACCTCAGAATATGTAACCTCATATAAATGTGAAGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTTTTCTTTAAACCTCAGAATATGTAACCTCATATAAATGTGAAGG  581

seq1  ATTGAATAAAGCGTTTGTGCTGGGGGTAGTCTCCAGAAAGTCCCAGATGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAATAAAGCGTTTGTGCTGGGGGTAGTCTCCAGAAAGTCCCAGATGC  631

seq1  CAGGAAAGCAAGAGGCTCTCAGGACTCAAAGGGGATGGCATTAGCTGAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAGCAAGAGGCTCTCAGGACTCAAAGGGGATGGCATTAGCTGAAA  681

seq1  TACCCAAAAAAGGGGAGAGAGAACATGTAGAGACCATATCCAGAGGTTAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAAAAAAGGGGAGAGAGAACATGTAGAGACCATATCCAGAGGTTAG  731

seq1  GCATGGTCCCTGGTTTAGGGAAGGGGCCAGCTACCCATGTCAAAAATATT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGTCCCTGGTTTAGGGAAGGGGCCAGCTACCCATGTCAAAAATATT  781

seq1  TATCCAGAATTTTTCCTGTCTAAAGGAAATACAGGAACAAAGAGTAGAGC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAGAATTTTTCCTGTCTAAAGGAAATACAGGAACAAAGAGTAGAGC  831

seq1  AGAGACTGAATGCTTCAGCAGATGTCAATGCTAGTGCAGTGAGGTGGGAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTGAATGCTTCAGCAGATGTCAATGCTAGTGCAGTGAGGTGGGAG  881

seq1  TGGGTGGGTGAGTGAAGGATCACCCTCATAGAAGCAGGGAGAGGAAGGAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGGGTGAGTGAAGGATCACCCTCATAGAAGCAGGGAGAGGAAGGAT  931

seq1  GGGATAGGGGGCTTGCAGAAGGGAAACCAAGAAGGATGTAAGATTTTAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATAGGGGGCTTGCAGAAGGGAAACCAAGAAGGATGTAAGATTTTAAA  981

seq1  TGTAAATAAATAAAATAATCAATAATTTTTAAAAAAGAAGCTGGTGTGTC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATAAATAAAATAATCAATAATTTTTAAAAAAGAAGCTGGTGTGTC  1031

seq1  CTTACTAAGCAGAGTATCTCACAGAAGGACACAGGAAGGTCTAAACAAAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTAAGCAGAGTATCTCACAGAAGGACACAGGAAGGTCTAAACAAAA  1081

seq1  CAGAGAATTC  1108
      ||||||||||
seq2  CAGAGAATTC  1091