BAC Information

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BAC

Clone NameB6Ng01-156L24
Chromosome18 (Build37)
Map Location 41,291,592 - 41,465,716
singlet/doubletdoublet
Overlap genenone
Upstream geneYipf5, Kctd16, EG225416
Downstream geneLOC677182, LOC100041988, LOC100041997, Prelid2, Gm851, Sh3rf2, EG435561, Plac8l1, LOC433177, Lars, EG625929, LOC100042757, Rbm27
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156L24.bB6Ng01-156L24.g
ACCDH951172DH951173
length556693
definitionDH951172|Mus musculus domesticus DNA, BAC clone: B6Ng01-156L24, 5' end.DH951173|Mus musculus domesticus DNA, BAC clone: B6Ng01-156L24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(41,465,161 - 41,465,716)(41,291,592 - 41,292,282)
sequence
gaattcttttaccctcatcattcctatgtgagattcctcagtccttcact
attctcagaaatgctctttctgacaactcttgactaaggtaaatttactt
tttagagtgtttaaaagtgtacatatagtaagttttcttttctttctttg
gttcgactcacataattaaatgcagttcccataaagtaagatgctaccgg
tatgtggctgtcaccatagtctaacatcgttagtatctttatattaactg
attaatgtgggagatgttggaaataatttccaagcaaaaatatgcttttt
atttgaaatagaataatttattccctcacaaaaaaaaatttacaaagcaa
taaagtgactaaagaaatctgtttcattacctaagaagggaatatatgtg
tccatatgcagatttctgtatgtagacattttttagggggtatatattta
gttaaaatttgggaggggagaatttatcctggaaactgttgactaagaga
taccaaacctacctgtttggatggggtgtgctacctttaatagatgtatg
aatgtt
gaattctttgttgtgttctgcaccccatatttaaatcgagttatttgggg
ttttggcagttagcttcttgagttctttatgtattttggatattggccct
ctagtgaagttattttttttccaatctgtaggttgccagtatatgctctt
gattgtgtctttcgccctgcaaaagctttgcagtttcataaggtcccatt
tatcatttgttggtgggtgaccagggggagtaatggcttgattataaata
agtaaaatattaataaaattcaaaaaaagagagaaagaaaggaaggaagg
aaggaaggaaggaaggaaggaaggaggaaagaaagaaataaagagagaga
gagagagagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaga
aagaaagaaagaaagaaagaaagagagaaagaaaacatgagttgggtttg
ttccaggattccaggaatattgtatttattcttggcttgaatgagactgg
aggcaattaggatcataggagataaataaattgtgtacagattttcagtt
gaattaacaggggctgtatgtagggtttagatgaaatagagataaacttt
agaagtagaaacatggatgctccatttattaaatgaggactactacagga
tatgatttagagaaatgataaagcaagctttgtttttgagtac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_41465161_41465716
seq2: B6Ng01-156L24.b_43_598 (reverse)

seq1  AGCATTCATACATCTATTAAAGGTTGCACACCCCATCCAAACAGGTAGGT  50
      | |||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AACATTCATACATCTATTAAAGGTAGCACACCCCATCCAAACAGGTAGGT  50

seq1  TTGGTATCTCTTTGTCAACAGTTTCCAGGATAAATTCTCCCCTCCCAAAT  100
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTGGTATCTCTTAGTCAACAGTTTCCAGGATAAATTCTCCCCTCCCAAAT  100

seq1  TTTAACTAAATATATACCCCCTAAAAAATGTCTACATACAGAAATCTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACTAAATATATACCCCCTAAAAAATGTCTACATACAGAAATCTGCA  150

seq1  TATGGACACATATATTCCCTTCTTAGGTAATGAAACAGATTTCTTTAGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGACACATATATTCCCTTCTTAGGTAATGAAACAGATTTCTTTAGTC  200

seq1  ACTTTATTGCTTTGTAAATTTTTTTTTGTGAGGGAATAAATTATTCTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATTGCTTTGTAAATTTTTTTTTGTGAGGGAATAAATTATTCTATT  250

seq1  TCAAATAAAAAGCATATTTTTGCTTGGAAATTATTTCCAACATCTCCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATAAAAAGCATATTTTTGCTTGGAAATTATTTCCAACATCTCCCAC  300

seq1  ATTAATCAGTTAATATAAAGATACTAACGATGTTAGACTATGGTGACAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATCAGTTAATATAAAGATACTAACGATGTTAGACTATGGTGACAGC  350

seq1  CACATACCGGTAGCATCTTACTTTATGGGAACTGCATTTAATTATGTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACCGGTAGCATCTTACTTTATGGGAACTGCATTTAATTATGTGAG  400

seq1  TCGAACCAAAGAAAGAAAAGAAAACTTACTATATGTACACTTTTAAACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAACCAAAGAAAGAAAAGAAAACTTACTATATGTACACTTTTAAACAC  450

seq1  TCTAAAAAGTAAATTTACCTTAGTCAAGAGTTGTCAGAAAGAGCATTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAAAGTAAATTTACCTTAGTCAAGAGTTGTCAGAAAGAGCATTTCT  500

seq1  GAGAATAGTGAAGGACTGAGGAATCTCACATAGGAATGATGAGGGTAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATAGTGAAGGACTGAGGAATCTCACATAGGAATGATGAGGGTAAAA  550

seq1  GAATTC  556
      ||||||
seq2  GAATTC  556

seq1: chr18_41291592_41292282
seq2: B6Ng01-156L24.g_67_758

seq1  GAATTCTTTGTTGTGTTCTGCACCCCATATTTAAATCGAGTTATTTGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTGTGTTCTGCACCCCATATTTAAATCGAGTTATTTGGGG  50

seq1  TTTTGGCAGTTAGCTTCTTGAGTTCTTTATGTATTTTGGATATTGGCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGCAGTTAGCTTCTTGAGTTCTTTATGTATTTTGGATATTGGCCCT  100

seq1  CTAGTGAAGTTATTTTTTTTCCAATCTGTAGGTTGCCAGTATATGCTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGAAGTTATTTTTTTTCCAATCTGTAGGTTGCCAGTATATGCTCTT  150

seq1  GATTGTGTCTTTCGCCCTGCAAAAGCTTTGCAGTTTCATAAGGTCCCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTGTCTTTCGCCCTGCAAAAGCTTTGCAGTTTCATAAGGTCCCATT  200

seq1  TATCATTTGTTGGTGGGTGACCAGGGGGAGTAATGGCTTGATTATAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATTTGTTGGTGGGTGACCAGGGGGAGTAATGGCTTGATTATAAATA  250

seq1  AGTAAAATATTAATAAAATTCAAAAAAAGAGAGAAAGAAAGGAAGGAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAATATTAATAAAATTCAAAAAAAGAGAGAAAGAAAGGAAGGAAGG  300

seq1  AAGGAAGGAAGGAAGGAAGGAAGGAGGAAAGAAAGAAATAAAGAGAGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGAAGGAAGGAAGGAAGGAGGAAAGAAAGAAATAAAGAGAGAGA  350

seq1  GAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA  400

seq1  AAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAAAACATGAGTTGGGTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAAAACATGAGTTGGGTTTG  450

seq1  TTCCAGGATTCCAGGAATATTGTATTTATTCTTGGCTTGAATGAGACTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGGATTCCAGGAATATTGTATTTATTCTTGGCTTGAATGAGACTGG  500

seq1  AGGCAATTAGGATCATAGGAGATAAATAAATTGTGTACAGATTTTCAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAATTAGGATCATAGGAGATAAATAAATTGTGTACAGATTTTCAGTT  550

seq1  GAATTAACAGGGGCTGTATGTAGGGTTTAGATGAAATAGAGATAAACTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAACAGGGGCTGTATGTAGGGTTTAGATGAAATAGAGATAAACTTT  600

seq1  AGAAGTAGAAACATGGATGCTCCATTTATTAAATGAGGACTACTACAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTAGAAACATGGATGCTCCATTTATTAAATGAGGACTACTACAGGA  650

seq1  TATGATTTAGAGAAATGATAAAGCAAGCTTTG-TTTTGAGTA  691
      |||||||||||||||||||||||||||||||| |||||||||
seq2  TATGATTTAGAGAAATGATAAAGCAAGCTTTGTTTTTGAGTA  692