BAC Information

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BAC

Clone NameB6Ng01-156P07
Chromosome18 (Build37)
Map Location 30,938,442 - 30,939,575
singlet/doubletsinglet
Overlap genenone
Upstream genePik3c3, LOC666094, LOC666100, EG666111, EG666114, LOC433168
Downstream geneRit2, EG666130, Syt4, LOC383420, Slc25a46, Sap130, LOC640549, Ammecr1l
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156P07.bB6Ng01-156P07.g
ACCDH951318DH951319
length3541,105
definitionDH951318|Mus musculus domesticus DNA, BAC clone: B6Ng01-156P07, 5' end.DH951319|Mus musculus domesticus DNA, BAC clone: B6Ng01-156P07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
catttatgagccctacattgtcttctgcattcccatcacccttatgtaaa
gctggttttgggggtatcactcagacatttattcccctttatttctttct
gtttctttaaattctgtgaaatatttaataaagcttaatattgtcccttt
aaattctgtgtctctgttcatctaggtgattcaccttggcaaacattctg
caggactgtgggttttggagagaggatattagcttgatcttgttggtatt
ttgagatctaggcacgtggacatcttctgatacctctgagtcttatgttg
acagatcaggatggaaaagaagaggttgtgctggtgggttggagtagggg
agtg

gaattcactttgcagaccaggctggcctcgaactcagaaatctgcctgcc
tctgatctctaacttttaactatatcagttattctgcttttgtttctctt
ggtttcagaaacttatatttcttatattattaaacaagataaacagtgag
aattcctacaatttctaaattgtgacaattgaaacatccaattttaaata
taattattaatataggatagagaaaacatttttatcaaaatttataaaat
ttagaccaagaaaattgattacggtataaatgacatgcaaaagataagat
ttttaaaattttaatctgggtttttattgtacagtgtaaccattagtatt
tgaagttgaaatgatttttcagataaaattttgaatgaaagattgaaaag
tttgctgtgtaaatttaaaaaaacatagaaatgaaaatttaattaaatcc
atagaatccaatctggacaataaacaagaatatttcaccaatattagcaa
aattagaatgaaaatatctcaatgatttcagactcaaatgtaaatatcag
tagaggagcttacagcatgctcccaactgtgaaaaggagcccaggtttcc
acaggcaattttgaaacagtaagtgttgtagaagaaagtataggcataca
ccattatcaccttgtgaggaaaatttctcaagatataataaaatactcct
tatagaaaataaaaactgcttattgacagagattattaaaaacaaaactc
tatcctcagaccctaaagcatgctcactgaagactttaaccagaataaat
acatttacacctaacaaggaaaaaagcccactctctccccacccccaaca
acaacaaaaaactgacaaaagcctaaagagacacttaataaaactgctga
ccatgcagtcaaaatcagcataggagtctaaatgaaatataagtaaagtg
cttaaatccagtactttatcagtgtatggatcatacatctttatccagac
tggggcagagcagcagatctcttgtgagtctgagctacatagcgagactc
tgttgaatatataaaaatataaattcagtgataaatcacagcatatcaag
gaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_30938442_30939575
seq2: B6Ng01-156P07.g_68_1172

seq1  GAATTCACTTTGCAGACCAGGCTGGCCTCGAACTCAGAAATCTGCCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGCAGACCAGGCTGGCCTCGAACTCAGAAATCTGCCTGCC  50

seq1  TCTGATCTCTAACTTTTAACTATATCAGTTATTCTGCTTTTGTTTCTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATCTCTAACTTTTAACTATATCAGTTATTCTGCTTTTGTTTCTCTT  100

seq1  GGTTTCAGAAACTTATATTTCTTATATTATTAAACAAGATAAACAGTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCAGAAACTTATATTTCTTATATTATTAAACAAGATAAACAGTGAG  150

seq1  AATTCCTACAATTTCTAAATTGTGACAATTGAAACATCCAATTTTAAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTACAATTTCTAAATTGTGACAATTGAAACATCCAATTTTAAATA  200

seq1  TAATTATTAATATAGGATAGAGAAAACATTTTTATCAAAATTTATAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATTAATATAGGATAGAGAAAACATTTTTATCAAAATTTATAAAAT  250

seq1  TTAGACCAAGAAAATTGATTACGGTATAAATGACATGCAAAAGATAAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACCAAGAAAATTGATTACGGTATAAATGACATGCAAAAGATAAGAT  300

seq1  TTTTAAAATTTTAATCTGGGTTTTTATTGTACAGTGTAACCATTAGTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAATTTTAATCTGGGTTTTTATTGTACAGTGTAACCATTAGTATT  350

seq1  TGAAGTTGAAATGATTTTTCAGATAAAATTTTGAATGAAAGATTGAAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTTGAAATGATTTTTCAGATAAAATTTTGAATGAAAGATTGAAAAG  400

seq1  TTTGCTGTGTAAATTTAAAAAAACATAGAAATGAAAATTTAATTAAATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGTGTAAATTTAAAAAAACATAGAAATGAAAATTTAATTAAATCC  450

seq1  ATAGAATCCAATCTGGACAATAAACAAGAATATTTCACCAATATTAGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAATCCAATCTGGACAATAAACAAGAATATTTCACCAATATTAGCAA  500

seq1  AATTAGAATGAAAATATCTCAATGATTTCAGACTCAAATGTAAATATCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGAATGAAAATATCTCAATGATTTCAGACTCAAATGTAAATATCAG  550

seq1  TAGAGGAGCTTACAGCATGCTCCCAACTGTGAAAAGGAGCCCAGGTTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGAGCTTACAGCATGCTCCCAACTGTGAAAAGGAGCCCAGGTTTCC  600

seq1  ACAGGCAATTTTGAAACAGTAAGTGTTGTAGAAGAAAGTATAGGCATACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCAATTTTGAAACAGTAAGTGTTGTAGAAGAAAGTATAGGCATACA  650

seq1  CCATTATCACCTTGTGAGGAAAATTTCTCAAGATATAATAAAATACTCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTATCACCTTGTGAGGAAAATTTCTCAAGATATAATAAAATACTCCT  700

seq1  TATAGAAAATAAAAACTGCTTATTGACAGAGATTATTAAAAACAAAACTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAAAATAAAAACTGCTTATTGACAGAGATTATTAAAAACAAAACTC  750

seq1  TATCCTCAGACCCTAAAGCATGCTCACTGAAGACTTTAACCAGAATAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTCAGACCCTAAAGCATGCTCACTGAAGACTTTAACCAGAATAAAT  800

seq1  ACATTTACACCTAACAAGGAAAAAAGCCCACTCTCTCCCCACCCCCAACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTACACCTAACAAGGAAAAAAGCCCACTCTCTCCCCACCCCCAACA  850

seq1  ACAACAAAAAACTGACAAAAGCCTAAAAGAGACACTTAATAAAAACTGCT  900
      |||||||||||||||||||||||| ||||||||||||||| |||||||||
seq2  ACAACAAAAAACTGACAAAAGCCT-AAAGAGACACTTAAT-AAAACTGCT  898

seq1  GACCATGCAGTCAAAATCAGCATAAGGAGTCTAAATGAAATATAAGTTAA  950
      ||||||||||||||||||||||| |||||||||||||||||||||| |||
seq2  GACCATGCAGTCAAAATCAGCAT-AGGAGTCTAAATGAAATATAAG-TAA  946

seq1  AGTGCTTAAAATCCAGTACTTTATCAGTGTATGGTATCATACATCTTTTA  1000
      ||||||| |||||||||||||||||||||||||| |||||||||| ||||
seq2  AGTGCTT-AAATCCAGTACTTTATCAGTGTATGG-ATCATACATC-TTTA  993

seq1  TCCCAGAACTTGGGGGCAGAAGCAGGCAGATCTC-TGTGAGTTCTGAGGC  1049
      | |||| |||  ||||||| |||| ||||||||| |||||| ||||| ||
seq2  T-CCAG-ACT--GGGGCAG-AGCA-GCAGATCTCTTGTGAG-TCTGA-GC  1035

seq1  TACATAGCGAGACTCTGTATGAAAATAATAAATAAAAATAATAAAATCCA  1099
      |||||||||||||||||| ||     |||| |||||||||   |||| ||
seq2  TACATAGCGAGACTCTGT-TG-----AATATATAAAAATA--TAAATTCA  1077

seq1  GTGGATTAAAATCAAACAGCATATCAAAAGGAAAA  1134
      || |||  |||||  ||||||||||  ||||||||
seq2  GT-GAT--AAATC--ACAGCATATC--AAGGAAAA  1105


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