BAC Information

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BAC

Clone NameB6Ng01-157M15
Chromosome18 (Build37)
Map Location 39,495,239 - 39,495,825
singlet/doubletsinglet
Overlap geneArhgap26
Upstream geneGnpda1, LOC240219, LOC100041839, Ndfip1, Spry4, 9630014M24Rik, LOC100041865, LOC100041875, LOC100042671, LOC666809, LOC100041894, Fgf1, EG545253
Downstream geneNr3c1, Pabpc2, LOC100041939, Yipf5, Kctd16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157M15.bB6Ng01-157M15.g
ACCDH951929DH951930
length5811,183
definitionDH951929|Mus musculus domesticus DNA, BAC clone: B6Ng01-157M15, 5' end.DH951930|Mus musculus domesticus DNA, BAC clone: B6Ng01-157M15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
caaagtctgtcatgcacagaggatgttcaagatcatgtcttactcatctt
atgcaaatgacctaggaaattattcacatagcagttgagttttatatact
catagcaaaattcctgccctttcctacataaaaagacaaatatttggttc
tgtacagggttgcttggcagtgttcctcttgtgtagtcactgtgttatcc
attctattcttaaaataaaaataagtcatggttagattgtttctttcaaa
ataaattgtcttttagagttcctgtcgccaaaggctgcattatataggtt
ctttgtaaggtaatggtacctgttggtcagagtctttccagtaccatgat
tggctgtttttgttcactgtttgaacccagaattctggtaaccgactggc
tgtcttcttatgatttgtgaaatttagagtgacccccaaaaagccttccc
taggtaaggcctgtgggggaatttgaagatttttcttggtggcaataggc
aataatagcctttcaaaagacacataaatgcatggttgttttattcacag
aggcaaggaggaggaagggaggaggaagagg
gaattcactttgcagttattttattagaggtttttgtaggtggttcagaa
agagtagtttataaagttttgttctgtctcaacaggttggttgcagagta
gcacttgcttcatagtgtgaggtttgagaagggttagtggtctcatttct
ggactcagtcgatgagcactgacatttggttctttgtaggagtctggtgt
atcttagcagaaactccaagtaggcgggagcttttcactcttaggtgatt
gtactctgttctcgttgcttattgttgtactacttatatctttatatctt
cttggctctatgttattaggtcatatgtacctagaaaatcaaccatttct
ttaagatttcccaatctattcatgtatacttttccaaaacattttctaat
aatgctggtatttgttgttacatttttatttttgtctctacatttttaag
tgtctttcagtgaggttgcctcaaggattgttaagggttgtcttttgggg
gaggtgggggcgcgtggagctctaaatcttttctctagattcattttatt
gttctaaaaggtgtgtgtcggtgtgtgcacacatgtgcgtctaggtctgc
gctcgtgagtgctaggcatcagattcctctggagctggaggtaacggcgg
cttcgagctgcccagcacgggcgctgggcatcacactcaggtcttctgca
agaacgctgtacgtccttaatcacccactgtgccgccagccctgagactc
aaccttgtttcaggtttgctttggattattctctcgggttctacctcttg
tattgatgcactcatcttataatgtctttctttttattgattttgagttg
tttgtccatattttgggagactttgtgatgtgttatcaaattattttcat
atctgtatccttaatgtatgacatacgtagctataaactttcttctgtgc
gttcttatatgttcccacatggcattctggaatgttaaatttctagaatg
caaacatttttcttctttgctcagtgcccctctggatcaacgaaactggt
agtcccctagcttgtcatttgacccttcatctttagttctagaacagggg
tgtctaccaagacttagggacaccatggtacactgacagtggttggcagg
aagatatctcttaagagggatgtgtgagtaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_39495239_39495825
seq2: B6Ng01-157M15.b_45_631

seq1  GAATTCCAAAGTCTGTCATGCACAGAGGATGTTCAAGATCATGTCTTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGTCTGTCATGCACAGAGGATGTTCAAGATCATGTCTTACT  50

seq1  CATCTTATGCAAATGACCTAGGAAATTATTCACATAGCAGTTGAGTTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTATGCAAATGACCTAGGAAATTATTCACATAGCAGTTGAGTTTTA  100

seq1  TATACTCATAGCAAAATTCCTGCCCTTTCCTACATAAAAAGACAAATATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTCATAGCAAAATTCCTGCCCTTTCCTACATAAAAAGACAAATATT  150

seq1  TGGTTCTGTACAGGGTTGCTTGGCAGTGTTCCTCTTGTGTAGTCACTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCTGTACAGGGTTGCTTGGCAGTGTTCCTCTTGTGTAGTCACTGTG  200

seq1  TTATCCATTCTATTCTTAAAATAAAAATAAGTCATGGTTAGATTGTTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCATTCTATTCTTAAAATAAAAATAAGTCATGGTTAGATTGTTTCT  250

seq1  TTCAAAATAAATTGTCTTTTAGAGTTCCTGTCGCCAAAGGCTGCATTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAATAAATTGTCTTTTAGAGTTCCTGTCGCCAAAGGCTGCATTATA  300

seq1  TAGGTTCTTTGTAAGGTAATGGTACCTGTTGGTCAGAGTCTTTCCAGTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTCTTTGTAAGGTAATGGTACCTGTTGGTCAGAGTCTTTCCAGTAC  350

seq1  CATGATTGGCTGTTTTTGTTCACTGTTTGAACCCAGAATTCTGGTAACCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATTGGCTGTTTTTGTTCACTGTTTGAACCCAGAATTCTGGTAACCG  400

seq1  ACTGGCTGTCTTCTTATGATTTGTGAAATTTAGAGTGACCCCCAAAAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCTGTCTTCTTATGATTTGTGAAATTTAGAGTGACCCCCAAAAAGC  450

seq1  CTTCCCTAGGTAAGGCCTGTGGGGGAATTTGAAGATTTTTCTTGGTGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTAGGTAAGGCCTGTGGGGGAATTTGAAGATTTTTCTTGGTGGCA  500

seq1  ATAGGCAATAATAGCCTTTCAAAAGACACATAAATGCATGGTTGTTTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCAATAATAGCCTTTCAAAAGACACATAAATGCATGGTTGTTTTAT  550

seq1  TCACAGAGGCAAGGAGGAGGAAGGGAGGAGGAAGAGG  587
      |||||||||||||||||||||||||||||||||||||
seq2  TCACAGAGGCAAGGAGGAGGAAGGGAGGAGGAAGAGG  587