BAC Information

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BAC

Clone NameB6Ng01-158B12
Chromosome18 (Build37)
Map Location 89,727,246 - 89,728,388
singlet/doubletsinglet
Overlap geneDok6
Upstream geneLOC665497, LOC100040003, LOC623208, Socs6, Rttn, Cd226
Downstream geneLOC383320, LOC620693, Eif3s6-ps2, LOC665526, Txndc10, LOC666779
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158B12.bB6Ng01-158B12.g
ACCDH952147DH952148
length1,1281,147
definitionDH952147|Mus musculus domesticus DNA, BAC clone: B6Ng01-158B12, 5' end.DH952148|Mus musculus domesticus DNA, BAC clone: B6Ng01-158B12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctagaatcattttcaaaaaaatggtattagttataatgaattagg
aaaaaatcttatttggaatttttggagaaatattaactcaaggtttatat
tcctttagtttcttaaagaattcaacacactatctttttgactgtgatga
ttattagtattatagtagaaatatttggtaccattttacatatttagtca
attggcttttttaatttaattagatataaatcacactacagtttcctatc
aattggttcttcaaggtagggctcaaaattatgagaaagtgtacaacatt
gctcattttcacattttatttttctaaaattattgtgagagtacatattc
cttggtgtttatatcttaagatgtgagtgttcaatatttatttatatgca
aatagtgtgtgtcctgttcctccaaattgcaatgttatctagaaactgca
atgtttgctccaagaggaaagggacgctcatgagactcaggagattaaac
aaaaggtcaccaaaggtcacagatgaagagggaatttttttttaatgtta
ttgagggcttctacccaacagagtacatgagagtgaactgttatcgagaa
tagagactcttaccagtcaaaataggaaaaaaatattcagaccattgaac
tgccagtaagctacatggagtgctccacagctgcagttttggaagtcatc
acccacattaaggtgaactttctggtgatacagctgcttttgtgtaattc
ctgattcatgtatctccttacccatactcttgttagtaaccccaattaaa
aactcattggttttccaatttgacattgctggaattgtcaacctgtcata
gattccccgactgtgataagttaacatttgtgtctcatctctttagaaat
agtctatcacacaacatgcagacacatatatatgcatatatatccagttt
cttaccaaagaatctgctgatccatgttattctttctcatcatccatgat
cacttccactattgataaggatatatgccagaggacagagagagtatatt
ttctttgtactctgattctaaaagacttagtgagtttgattataacatac
tacaccatgcattctgtatttgcatcat
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccaggatccaccccataatca
gcatccaaacgctgacaccattgcatacactagcaagatttttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgacgggcccagcaaaca
cagaagtggatgctcacagtcagctaatgatggatcataggctccaatgg
agagctagagaagtagccaagagctaaaggatctgcaccctatagtgaca
acattatgagctaccagtactcgggagctcttgactctagctgcttatat
caaagatgctagtcgcattctgaagaaggctcatgacttgcactttatat
gtctcagtaaggattcaaggtcaaagtgaatgggtgctcagcaatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_89727246_89728388
seq2: B6Ng01-158B12.b_45_1172 (reverse)

seq1  ATGATGCAAATACAGAATGCAT-GTGTAGTATTGGTTTATTAATACAAAC  49
      |||||||||||||||||||||| |||||||||  |||   |||| |||||
seq2  ATGATGCAAATACAGAATGCATGGTGTAGTAT--GTT--ATAAT-CAAAC  45

seq1  TCACTAAAATGTCTTTTAAGAATCAGAGTACAAAGAAATATATACTCTTC  99
      |||||||   ||||||| |||||||||||||||||||| |||||||||  
seq2  TCACTAA---GTCTTTT-AGAATCAGAGTACAAAGAAA-ATATACTCT--  88

seq1  CTCTGTCCCTCTGGCATATATCCTTTATCAGATAGTGGAAGTGATCATGG  149
      |||||| |||||||||||||||| |||||| |||||||||||||||||||
seq2  CTCTGT-CCTCTGGCATATATCC-TTATCA-ATAGTGGAAGTGATCATGG  135

seq1  ATGATGAGAAAGAATAACATGGATCAGCAAGATTCTTTGGTAAGAAACTG  199
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ATGATGAGAAAGAATAACATGGATCAGC-AGATTCTTTGGTAAGAAACTG  184

seq1  GATATATATGCATATATATGTGTCTGCATGTTGTGTGATAGACTATTTCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATATATGCATATATATGTGTCTGCATGTTGTGTGATAGACTATTTCT  234

seq1  AAAGAGATGAGACACAAATGTTAACTTATCACAGTCGGGGAATCTATGAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGATGAGACACAAATGTTAACTTATCACAGTCGGGGAATCTATGAC  284

seq1  AGGTTGACAATTCCAGCAATGTCAAATTTGGAAACCAATGAGTTTTTAAT  349
      |||||||||||||||||||||||||||| | |||||||||||||||||||
seq2  AGGTTGACAATTCCAGCAATGTCAAATTGGAAAACCAATGAGTTTTTAAT  334

seq1  TGGGGTTACTAACAAGAGTATGGGTAAGGAGATACATGAATCAGGAATTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTTACTAACAAGAGTATGGGTAAGGAGATACATGAATCAGGAATTA  384

seq1  CACAAAAGCAGCTGTATCACCAGAAAGTTCACCTTAATGTGGGTGATGAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAAGCAGCTGTATCACCAGAAAGTTCACCTTAATGTGGGTGATGAC  434

seq1  TTCCAAAACTGCAGCTGTGGAGCACTCCATGTAGCTTACTGGCAGTTCAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAAACTGCAGCTGTGGAGCACTCCATGTAGCTTACTGGCAGTTCAA  484

seq1  TGGTCTGAATATTTTTTTCCTATTTTGACTGGTAAGAGTCTCTATTCTCG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTGAATATTTTTTTCCTATTTTGACTGGTAAGAGTCTCTATTCTCG  534

seq1  ATAACAGTTCACTCTCATGTACTCTGTTGGGTAGAAGCCCTCAATAACAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAGTTCACTCTCATGTACTCTGTTGGGTAGAAGCCCTCAATAACAT  584

seq1  TAAAAAAAAATTCCCTCTTCATCTGTGACCTTTGGTGACCTTTTGTTTAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAAAATTCCCTCTTCATCTGTGACCTTTGGTGACCTTTTGTTTAA  634

seq1  TCTCCTGAGTCTCATGAGCGTCCCTTTCCTCTTGGAGCAAACATTGCAGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTGAGTCTCATGAGCGTCCCTTTCCTCTTGGAGCAAACATTGCAGT  684

seq1  TTCTAGATAACATTGCAATTTGGAGGAACAGGACACACACTATTTGCATA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGATAACATTGCAATTTGGAGGAACAGGACACACACTATTTGCATA  734

seq1  TAAATAAATATTGAACACTCACATCTTAAGATATAAACACCAAGGAATAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAATATTGAACACTCACATCTTAAGATATAAACACCAAGGAATAT  784

seq1  GTACTCTCACAATAATTTTAGAAAAATAAAATGTGAAAATGAGCAATGTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCTCACAATAATTTTAGAAAAATAAAATGTGAAAATGAGCAATGTT  834

seq1  GTACACTTTCTCATAATTTTGAGCCCTACCTTGAAGAACCAATTGATAGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACTTTCTCATAATTTTGAGCCCTACCTTGAAGAACCAATTGATAGG  884

seq1  AAACTGTAGTGTGATTTATATCTAATTAAATTAAAAAAGCCAATTGACTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTAGTGTGATTTATATCTAATTAAATTAAAAAAGCCAATTGACTA  934

seq1  AATATGTAAAATGGTACCAAATATTTCTACTATAATACTAATAATCATCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTAAAATGGTACCAAATATTTCTACTATAATACTAATAATCATCA  984

seq1  CAGTCAAAAAGATAGTGTGTTGAATTCTTTAAGAAACTAAAGGAATATAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAAAAAGATAGTGTGTTGAATTCTTTAAGAAACTAAAGGAATATAA  1034

seq1  ACCTTGAGTTAATATTTCTCCAAAAATTCCAAATAAGATTTTTTCCTAAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGAGTTAATATTTCTCCAAAAATTCCAAATAAGATTTTTTCCTAAT  1084

seq1  TCATTATAACTAATACCATTTTTTTGAAAATGATTCTAGAATTC  1143
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATAACTAATACCATTTTTTTGAAAATGATTCTAGAATTC  1128