BAC Information

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BAC

Clone NameB6Ng01-163E13
Chromosome18 (Build37)
Map Location 49,982,410 - 49,983,435
singlet/doubletsinglet
Overlap genenone
Upstream geneDtwd2
Downstream geneDmxl1, Tnfaip8, Hsd17b4, LOC626721, LOC667233, Gm93, Hdhd1a, LOC100042373
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163E13.bB6Ng01-163E13.g
ACCDH955911DH955912
length1,1771,026
definitionDH955911|Mus musculus domesticus DNA, BAC clone: B6Ng01-163E13, 5' end.DH955912|Mus musculus domesticus DNA, BAC clone: B6Ng01-163E13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatgaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacgctcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaattggacatagtactaccggaggatccagcaatacctctcctgggca
tatatgcagaagatgcccgaaccggtaagaaggacacatgctctactatg
ttcatagcagccttatttataatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctaggcaaa
tggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaag
gagctctcacaatatgtactcactgataagtggatattagcccagaaact
taggatacccaagatataagatacaatttgctaaacacattaaactcaag
agaacgaagaccaaagtgtggacactttgccccttcttagaataggaaac
aaaacacccatggaaggagttacagagacaaaatttggaagtgtgacgaa
aggatggaccatctagtgattgccatatccagagatccatcccatgatca
gcttccaaacgctgacaccattgcatacactagcaagattttgctgaaag
gacccagatatagctgtctcttgtgagactacgccagggcctagcaaaca
cagaagtggatgctcacagtcagctattgaatggaccacagggcccccaa
tggaggactagagaaagcacccaaggaactaaagggaactgcaaccctat
aagatggaacaacaatatgaactaaccagtactccggagctcttgtctct
agctgcttatgtatcaaaagatggtctataggccatccacttgaaaatgg
ccattgacttgcaaactttatatggcccagttacaggaatgtcaggcaat
aatgggggagtaggtggtgatagcgaa
gaattccacagaggaacatcttactagagccctgaacagacagaaaggaa
agcagagtcaaatggatggatggcttatctttcatccagcattctcattc
tgtttttcaaaaaaacacaacctttataagacagaaattaagttgttaaa
agtcataatactttttagaatttatattatttatttaatttgtattgtta
ctactattgtgcattccaggcaatcagacttttgttttgctttccagaca
gagtttctctatatagccctggctgtcctgaaattctctttgtagaccag
actggcttccaactcacatatctgcctgcctctgcctcccaagtgctgga
attcagtcagatttcttattgtaggttgtgagctttcagagtccttaaaa
tctagcagtagataaataccatcttttactatacaacatattacacacat
ttttctctgagaaaaaatattgtcctgtagcttataattttcaaaaaata
aaaatggtatatttacattttctagtatagataaaacaatttgatgcctg
ccatggtatacatgtttgctatatataattttttttttttgtagagaagt
tttgctctggataaaatgagggaacatgttttgaaggttcctcttagaag
agtaggaattgagataagccactgattagagggttggatgtctaaggaaa
tgttttttttactaatgtaataaaaatagggagaaaatagcaggatgagc
cattttggtgagggaggctaagtataatgttagtttgtgaatttgaagta
atttcagatgatgtttgaagagatgggactgaagcttaggaattctatca
gtacttccatgcaaacctggctgatagtcaccgtgtcaagagttcagcca
cagggggggatgtatgtttcacagggagagggtaaagatagcgatcagga
ggaccaataactaattgtagtgacacctctgtggtgtggatttagtgagg
aagatgtggactaccctgatctgttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_49982410_49983435
seq2: B6Ng01-163E13.g_70_1095 (reverse)

seq1  CAACAGAATCA-GGTAGT-CACATC-TCCTCACTAACT-CACACCACAGG  46
      |||||| |||| |||||| |||||| |||||||||| | |||||||||| 
seq2  CAACAG-ATCAGGGTAGTCCACATCTTCCTCACTAAATCCACACCACAGA  49

seq1  AGTGTCACTACATTTAGTTCTTGGTTCTCCCTGATCCGCTTTCTTTACCC  96
       ||||||||||| |||||| ||||| || |||||| |||| |||||||||
seq2  GGTGTCACTACAATTAGTTATTGGTCCT-CCTGAT-CGCTATCTTTACCC  97

seq1  TCTTCCCTGTGAAACCTACTTCCCCTCCTGTGGCTGAACTCTTGACACGG  146
      || |||||||||||| ||| ||||| ||||||||||||||||||||||||
seq2  TC-TCCCTGTGAAACATACATCCCCCCCTGTGGCTGAACTCTTGACACGG  146

seq1  TGACTATCAGCCAGGTTTGCATTGGAAGTACTGATAGAATTCCTAAGCTT  196
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TGACTATCAGCCAGGTTTGCA-TGGAAGTACTGATAGAATTCCTAAGCTT  195

seq1  CAGTCCCATCTCTTCAAACATCATCTGTAATTACTTCAAATTCACAAACT  246
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CAGTCCCATCTCTTCAAACATCATCTGAAATTACTTCAAATTCACAAACT  245

seq1  AACATTATACTTAGCCTCCCTCACCAAAATGGCTCATCCTGCTATTTTCT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTATACTTAGCCTCCCTCACCAAAATGGCTCATCCTGCTATTTTCT  295

seq1  CCCTATTTTTATTACATTAGT-AAAACAACATTTCCTTAGACATCCAACC  345
      ||||||||||||||||||||| |||| |||||||||||||||||||||||
seq2  CCCTATTTTTATTACATTAGTAAAAAAAACATTTCCTTAGACATCCAACC  345

seq1  CTCTAATCAGTGGCTTATCTCAATTCCTACTCTTCTAAGAGGAACCTTCA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAATCAGTGGCTTATCTCAATTCCTACTCTTCTAAGAGGAACCTTCA  395

seq1  AAACATGTTCCCTCATTTTATCCAGAGCAAAACTTCTCTACAAAAAAAAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGTTCCCTCATTTTATCCAGAGCAAAACTTCTCTACAAAAAAAAA  445

seq1  AAATTATATATAGCAAACATGTATACCATGGCAGGCATCAAATTGTTTTA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATATATAGCAAACATGTATACCATGGCAGGCATCAAATTGTTTTA  495

seq1  TCTATACTAGAAAATGTAAATATACCATTTTTATTTTTTGAAAATTATAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATACTAGAAAATGTAAATATACCATTTTTATTTTTTGAAAATTATAA  545

seq1  GCTACAGGACAATATTTTTTCTCAGAGAAAAATGTGTGTAATATGTTGTA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAGGACAATATTTTTTCTCAGAGAAAAATGTGTGTAATATGTTGTA  595

seq1  TAGTAAAAGATGGTATTTATCTACTGCTAGATTTTAAGGACTCTGAAAGC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAAAGATGGTATTTATCTACTGCTAGATTTTAAGGACTCTGAAAGC  645

seq1  TCACAACCTACAATAAGAAATCTGACTGAATTCCAGCACTTGGGAGGCAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAACCTACAATAAGAAATCTGACTGAATTCCAGCACTTGGGAGGCAG  695

seq1  AGGCAGGCAGATATGTGAGTTGGAAGCCAGTCTGGTCTACAAAGAGAATT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGCAGATATGTGAGTTGGAAGCCAGTCTGGTCTACAAAGAGAATT  745

seq1  TCAGGACAGCCAGGGCTATATAGAGAAACTCTGTCTGGAAAGCAAAACAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGACAGCCAGGGCTATATAGAGAAACTCTGTCTGGAAAGCAAAACAA  795

seq1  AAGTCTGATTGCCTGGAATGCACAATAGTAGTAACAATACAAATTAAATA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTGATTGCCTGGAATGCACAATAGTAGTAACAATACAAATTAAATA  845

seq1  AATAATATAAATTCTAAAAAGTATTATGACTTTTAACAACTTAATTTCTG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATATAAATTCTAAAAAGTATTATGACTTTTAACAACTTAATTTCTG  895

seq1  TCTTATAAAGGTTGTGTTTTTTTGAAAAACAGAATGAGAATGCTGGATGA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATAAAGGTTGTGTTTTTTTGAAAAACAGAATGAGAATGCTGGATGA  945

seq1  AAGATAAGCCATCCATCCATTTGACTCTGCTTTCCTTTCTGTCTGTTCAG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAAGCCATCCATCCATTTGACTCTGCTTTCCTTTCTGTCTGTTCAG  995

seq1  GGCTCTAGTAAGATGTTCCTCTGTGGAATTC  1026
      |||||||||||||||||||||||||||||||
seq2  GGCTCTAGTAAGATGTTCCTCTGTGGAATTC  1026