BAC Information

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BAC

Clone NameB6Ng01-163M04
Chromosome18 (Build37)
Map Location 71,356,559 - 71,357,712
singlet/doubletsinglet
Overlap genenone
Upstream gene2310002L13Rik, 4930503L19Rik, Stard6, Poli, Mbd2, EG668032
Downstream geneDcc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163M04.bB6Ng01-163M04.g
ACCDH956266DH956267
length1,1741,153
definitionDH956266|Mus musculus domesticus DNA, BAC clone: B6Ng01-163M04, 5' end.DH956267|Mus musculus domesticus DNA, BAC clone: B6Ng01-163M04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattacatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
tggaggagctagagaaagtagccaaggagctaaagggatcttgcaccctt
ataggtggaacaacattatggagctaaccagtacccggagctccttgacc
tctagctgcatatatatcaaagatggcctagtcggccatcaactggagaa
gagcccatgacttgcacttatatgccaatacaggaatacaggcaaagggg
atgggtggcagggagatggggtgt
gaattcaatggattttattagtagattttattttttgtggtttcatattt
atgattatattaacttgaaaccatttctaagtggcttactacaatacaaa
atattttgttgagcctcatggtagcaataaagaaaatttataatctaaga
ctgaaaaataataagaagcaaaaatactccatagactaaactaacaacaa
aggaatctggaaggaaggaatgaaaagaatggaaggaaatgaggggagaa
aaagctcaacaatttataagatggctgtaggaaaccttacctctctgtaa
ttatttaactggaagtggatgacattctctaatcaaaagattaaactgaa
aaatgtaagtgaagaaagcacaccgttacgttgttcacaagaaattcaat
tctacaaacacaaagtgaaaaagatgcaatcagatattttatgtaaatgg
aataatgaaacactaacaaacatacatagataaaatgtatcttaaataaa
gatcaacaaaaagatgcatgaaggatgaagatgagacattcatgtttaag
ggcactggctgctctcctgaagttcctgggttgattttggtaccctcatg
gcagcttacaaaggtctcaactccagccccaggagatgggatgccttctg
ccctccatgggccctgtaatgcacttagtgcacagataagcatgcagcca
aatcactcatatacttcaaaataaacaaagtagaaaaaagtgttaaaagg
ttattctataaccataaagtgggcaactcaacaagaagaattaataattc
tatacatagatatacttataatctctaatatcattatgtctaaatataaa
atactagttaatttgatcagactggtagacttagacctgtagttctaggc
taactttacttcctagtttaatctacaaagaaatgggagggttaaagtga
agactagaccatgttccaaatgatatctaaagagtattccatccaacatg
ttaaaaatgtacatccttctcaatgtacatgatgcatctttctacagaag
gtcccaagggccctggaaatccacacggaaatataggaaactctaccctc
aggaaagacggacctatctttgagtaaaaggcttagaaacaattttccag
caa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_71356559_71357712
seq2: B6Ng01-163M04.g_68_1220 (reverse)

seq1  TTGCTTGGAAAATTGTTTTCTAGCCTTTTACTCGAAGATAGTGTCTGTCT  50
      |||| |||||||||||||   |||||||||||| ||||||| ||| ||||
seq2  TTGC-TGGAAAATTGTTTCTAAGCCTTTTACTCAAAGATAG-GTCCGTCT  48

seq1  TTTTCCCTGAGG--TGAGTTTCCT-TATTT-CGTGTGGA-TTCCAGGGCC  95
      ||   |||||||   ||||||||| ||||| |||||||| ||||||||||
seq2  TT---CCTGAGGGTAGAGTTTCCTATATTTCCGTGTGGATTTCCAGGGCC  95

seq1  CTTGGGACCTTCTGTAG-AAGATGCATCATGTACATTTGAGAAGGATGTA  144
      ||||||||||||||||| ||||||||||||||||| ||||||||||||||
seq2  CTTGGGACCTTCTGTAGAAAGATGCATCATGTACA-TTGAGAAGGATGTA  144

seq1  CATTTTTAACATGTTGGATGGAATACTCTTTAGATATCATTTGGAACATT  194
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CATTTTTAACATGTTGGATGGAATACTCTTTAGATATCATTTGGAACA-T  193

seq1  GGTCTAGTCTTCACTTTAACCCTCCCATTTCTTTGTAGATTAAACTAGGA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTAGTCTTCACTTTAACCCTCCCATTTCTTTGTAGATTAAACTAGGA  243

seq1  AGTAAAGTTAGCCTAGAACTACAGGTCTAAGTCTACCAGTCTGATCAAAT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAGTTAGCCTAGAACTACAGGTCTAAGTCTACCAGTCTGATCAAAT  293

seq1  TAACTAGTATTTTATATTTAGACATAATGATATTAGAGATTATAAGTATA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAGTATTTTATATTTAGACATAATGATATTAGAGATTATAAGTATA  343

seq1  TCTATGTATAGAATTATTAATTCTTCTTGTTGAGTTGCCCACTTTATGGT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGTATAGAATTATTAATTCTTCTTGTTGAGTTGCCCACTTTATGGT  393

seq1  TATAGAATAACCTTTTAACACTTTTTTCTACTTTGTTTATTTTGAAGTAT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAATAACCTTTTAACACTTTTTTCTACTTTGTTTATTTTGAAGTAT  443

seq1  ATGAGTGATTTGGCTGCATGCTTATCTGTGCACTAAGTGCATTACAGGGC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTGATTTGGCTGCATGCTTATCTGTGCACTAAGTGCATTACAGGGC  493

seq1  CCATGGAGGGCAGAAGGCATCCCATCTCCTGGGGCTGGAGTTGAGACCTT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGAGGGCAGAAGGCATCCCATCTCCTGGGGCTGGAGTTGAGACCTT  543

seq1  TGTAAGCTGCCATGAGGGTACCAAAATCAACCCAGGAACTTCAGGAGAGC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGCTGCCATGAGGGTACCAAAATCAACCCAGGAACTTCAGGAGAGC  593

seq1  AGCCAGTGCCCTTAAACATGAATGTCTCATCTTCATCCTTCATGCATCTT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGTGCCCTTAAACATGAATGTCTCATCTTCATCCTTCATGCATCTT  643

seq1  TTTGTTGATCTTTATTTAAGATACATTTTATCTATGTATGTTTGTTAGTG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGATCTTTATTTAAGATACATTTTATCTATGTATGTTTGTTAGTG  693

seq1  TTTCATTATTCCATTTACATAAAATATCTGATTGCATCTTTTTCACTTTG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTATTCCATTTACATAAAATATCTGATTGCATCTTTTTCACTTTG  743

seq1  TGTTTGTAGAATTGAATTTCTTGTGAACAACGTAACGGTGTGCTTTCTTC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTAGAATTGAATTTCTTGTGAACAACGTAACGGTGTGCTTTCTTC  793

seq1  ACTTACATTTTTCAGTTTAATCTTTTGATTAGAGAATGTCATCCACTTCC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACATTTTTCAGTTTAATCTTTTGATTAGAGAATGTCATCCACTTCC  843

seq1  AGTTAAATAATTACAGAGAGGTAAGGTTTCCTACAGCCATCTTATAAATT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAATAATTACAGAGAGGTAAGGTTTCCTACAGCCATCTTATAAATT  893

seq1  GTTGAGCTTTTTCTCCCCTCATTTCCTTCCATTCTTTTCATTCCTTCCTT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGCTTTTTCTCCCCTCATTTCCTTCCATTCTTTTCATTCCTTCCTT  943

seq1  CCAGATTCCTTTGTTGTTAGTTTAGTCTATGGAGTATTTTTGCTTCTTAT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATTCCTTTGTTGTTAGTTTAGTCTATGGAGTATTTTTGCTTCTTAT  993

seq1  TATTTTTCAGTCTTAGATTATAAATTTTCTTTATTGCTACCATGAGGCTC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTCAGTCTTAGATTATAAATTTTCTTTATTGCTACCATGAGGCTC  1043

seq1  AACAAAATATTTTGTATTGTAGTAAGCCACTTAGAAATGGTTTCAAGTTA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAATATTTTGTATTGTAGTAAGCCACTTAGAAATGGTTTCAAGTTA  1093

seq1  ATATAATCATAAATATGAAACCACAAAAAATAAAATCTACTAATAAAATC  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATCATAAATATGAAACCACAAAAAATAAAATCTACTAATAAAATC  1143

seq1  CATTGAATTC  1154
      ||||||||||
seq2  CATTGAATTC  1153