BAC Information

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BAC

Clone NameB6Ng01-164B04
Chromosome18 (Build37)
Map Location 18,083,396 - 18,084,166
singlet/doubletsinglet
Overlap genenone
Upstream gene1700001G01Rik, 4921533I20Rik, LOC100040647
Downstream geneLOC100040658
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164B04.bB6Ng01-164B04.g
ACCDH956497DH956498
length9101,231
definitionDH956497|Mus musculus domesticus DNA, BAC clone: B6Ng01-164B04, 5' end.DH956498|Mus musculus domesticus DNA, BAC clone: B6Ng01-164B04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcacccgagaaataccgaatggctgagaagcacctgaaaaaaat
gttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcgacgatgtagagaaagaggaacactcctccattgttggt
gggattgcaagcttgtacaactactctggaaatcagactggcggttcctc
agaaaattggacatagtactactggaggattccacaatacctctcctgga
catatatccagaagatgttccaacttgtaataaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctgaaaagaacccaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatttacacaat
ggagtactaatcagctattaaaaagaatcaaattatgaaattcctaggca
aatggatggacctggagggcatcatcctgagtgaagtaacccaatcacaa
aagaactcacatgatatgtactcattgctaagtggatattagcccagaaa
ctccgaatacccaagatataggaaacagtttaacttaaatattaagaact
tgtcttggtgctcaaatactttgatctgcctctttgtgtgcacatgagtg
gcttatacgagagttggcattttgccagggatatttaattgtatgctttc
tggtgccattatgacttggatgaaggagttcctaagcctgatgtgggctg
tattttagatgccaagagacagcatttttattctggggttaggcagtggg
aatgggggaaataaagggagtgggagaaacacgcaccctgccaaggtctg
ggcgttctgg
gaattccataaaatattatctcaatttagaagtatcctagaggccaagtt
ttctgggctggtttttgccacgtgttgttatttaaaatgactccaatact
gagttatcaatttaaagctaacgtttttgtaaccaatgttacctttttga
tcatacccaataatttataagccaatatattatgaccaagatatgcagag
catatttacacctttaagactagtcaaaaaccaaatgaagtgactacact
aatcttataaatttcgacaaatcaaagaattttactttttctaggtataa
ttttaagataaaaaacactttgtcattttctgaacccaattgcagagaat
tttctacgaaaacaccaactatcagctatttttgccttagaactaagaag
ctgcatactcctttttttaaaaacagtttttcagcaggagcttccttgct
gtgcttcactcctggctacagtgcagggcaaattaaatcagcctccgctg
ggtagactaactatatcaagagatggatagccagcagataaaggtttaac
catttttttcaacatgaaacaaaacaacagtcattcatacaacgaaacaa
agatagacatgaattaacacatggacatatattggtgaatcaaacacaaa
caacacagagaaggtagaaaacttgatgttaccaaatctaagagtgtctc
cggtaggagtagacactcgagagagaaagccagatgtctccagatttccg
tgtccctgagagagttctgaaatccattttccttctttcttgatctctct
ttatatatatagattttttttgaatttttactatttttatattattttat
tattttaagccctactcctctcgcctgatgcagttcttgactgcggacaa
atgcctgttttctttttcactcccattttccactgtcaacctctcactga
tatcagagctgggccacactgactcagtctaacctgtgtccctttgcacc
tactgcaacatttgaaagatgaagtttaaagccagcactagcatggatac
aaagtgttgctcactatgcaagaatcatcttcttctatctttcttgtaag
ctctactaaagctgttatcctgttgatccaccttatcagtactgttcggt
cacacactgtaacactaagacactactgtcctgaaggaagcggcgtatgg
gagagacactgtagagaaataattgtgaagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_18083396_18084166
seq2: B6Ng01-164B04.b_178_956

seq1  TCAAAAATTCAGGTGACAGCAGATGCTGGCGACGATGTAGAGAAAGAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAATTCAGGTGACAGCAGATGCTGGCGACGATGTAGAGAAAGAGGA  50

seq1  ACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACTACTCTGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACTACTCTGGAA  100

seq1  ATCAGACTGGCGGTTCCTCAGAAAATTGGACATAGTACTACTGGAGGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGACTGGCGGTTCCTCAGAAAATTGGACATAGTACTACTGGAGGATT  150

seq1  CCACAATACCTCTCCTGGACATATATCCAGAAGATGTTCCAACTTGTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAATACCTCTCCTGGACATATATCCAGAAGATGTTCCAACTTGTAAT  200

seq1  AAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAG  250

seq1  AAGCTGAAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGAAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAA  300

seq1  TGTGGTACATTTACACAATGGAGTACTAATCAGCTATTAAAAAGAATCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTACATTTACACAATGGAGTACTAATCAGCTATTAAAAAGAATCAA  350

seq1  ATTATGAAATTCCTAGGCAAATGGATGGACCTGGAGGGCATCATCCTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGAAATTCCTAGGCAAATGGATGGACCTGGAGGGCATCATCCTGAG  400

seq1  TGAAGTAACCCAATCACAAAAGAACTCACATGATATGTACTCATTGCTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTAACCCAATCACAAAAGAACTCACATGATATGTACTCATTGCTAA  450

seq1  GTGGATATTAGCCCAGAAACTCCGAATACCCAAGATATAGGAAACAGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATATTAGCCCAGAAACTCCGAATACCCAAGATATAGGAAACAGTTT  500

seq1  AACTTAAATATTAAGAACTTGTCTTGGTGCTCAAATACTTTGATCTGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAAATATTAAGAACTTGTCTTGGTGCTCAAATACTTTGATCTGCCT  550

seq1  CTTTGTGTGCACATGAGTGGCTTATACGAGAGTTGGCATTTTGCCAGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGTGCACATGAGTGGCTTATACGAGAGTTGGCATTTTGCCAGGGA  600

seq1  TATTTAATTGTATGCTTTCTGGTGCCATTATGACTTGGATGAAGGAGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAATTGTATGCTTTCTGGTGCCATTATGACTTGGATGAAGGAGTTC  650

seq1  CTAAGCCTGATGTGGGCTGTA-TTTAGATGCCAAGAGACAGCATTTTTAT  699
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTAAGCCTGATGTGGGCTGTATTTTAGATGCCAAGAGACAGCATTTTTAT  700

seq1  TCTGGGGTTAGGCAGTGGGAATGGGGGAAATAAAGGGAGTGGGAGAAAAC  749
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TCTGGGGTTAGGCAGTGGGAATGGGGGAAATAAAGGGAGTGGGAG-AAAC  749

seq1  ACGCACCCTGCCAAAGTTCTGG---------  771
      |||||||||||| ||| |||||         
seq2  ACGCACCCTGCC-AAGGTCTGGGCGTTCTGG  779