BAC Information

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BAC

Clone NameB6Ng01-164B19
Chromosome18 (Build37)
Map Location 59,003,366 - 59,146,626
singlet/doubletdoublet
Overlap geneAdamts19
Upstream geneSlc12a2, 9330166H04Rik, Fbn2, Slc27a6, Isoc1
Downstream geneA730017C20Rik, 4833446K15Rik, LOC667549
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164B19.bB6Ng01-164B19.g
ACCDH956527DH956528
length8471,110
definitionDH956527|Mus musculus domesticus DNA, BAC clone: B6Ng01-164B19, 5' end.DH956528|Mus musculus domesticus DNA, BAC clone: B6Ng01-164B19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,145,780 - 59,146,626)(59,003,366 - 59,004,483)
sequence
gaattctgtattgtaaaacgctgtatgtcacaacctgggaaatggggtgg
cgtggaacattcactattattacatattttttaaatgaaggtttgagaat
ctgtttcagcttagtacatcttgtctttcctaaatgaccgctggcagata
tgaatggtttgtctcttattctgttaaggcaaagcaaaacaaacaacaaa
acaaatgaacaatttcatttcacctcccaaagatttcatctgactctcct
tttagaacaactcacttattgaaaatgacttcagtttcattgactgtcca
acatcgattgattgttcttcaaatataactaacttatattttagcattag
aattttttaattttcttgaacctgagcatttaaatgaaatgttaatgtga
acatggaagggttggtgtgggtatagctgttaatgggggctggagagata
ctaaagcatttgctagattatatgttcctctaagcatttacggctctttc
cggggacccaagtttggattagaacacccttgtcagacagctcacaactg
cctggaactccagcaccagggtctcaagcacctttttctcacctttatgg
gcaccccacacacacagacacacactacacacagacacacactacacaca
agcattcacagaaatcatatataataaaatacatcttctaaaaagaaaac
agtcataaatgatggcccaacacataataatatgtccaggaaaggactct
atgaagcaaagaaaatattagctccttcctagcaagcttgagaacctgat
aagtagtgatatgtgtgtatttatataagtgtgtatgtgtgtggaca
gaattctttaaactttcatcagtggccctttacatcacaaaacgtagatg
gcttggagaacagaaagtacaataattactgctgattggaagaatacagg
attgatctatattgatgatagtgagagcaagttccttgctcatatataga
tctgtgtcttagacttgagacaattccatcatgggctaaatcttcaaaag
aaaatttacatttacttatctaatacttattttcttaaactttactaact
gaatcataaacagcatattaaagattgtattttattttattttattttat
tttattttattttattttattttattttattttattttattttatgtgta
taagtgtttacgtatatgcctgtgcatcacatgtatgccgggtgccctgg
gaagtcagaatagattgcccgaatctctggaactggaaatgtggacagtt
gtgagccaccatgaaggtgctgggaattgaactcagaacctctgcaaaat
aaacataagattgtcaatgctgaaccatctttccagtcccacaagcatgt
tttaaaaattatatagaagtcttaaactatttgtaaagcagtactaaaca
gtgcatgcacattgaagctcattaggaaggaaattttttttcatttaata
gtaattatacctctctagatagtttataatatttctaattgagtaaataa
ataataggaaaaggagtgttcttgtttgggaagttggttaaattaggaaa
gtaattcatgtgtatttacaaatgacgggatgaatagcaatccctttagg
tttatggtttggggtggcttttaggttccctagacaaatgaagaacacaa
tttaatacagattacagtgtgaggctccagttagcacatcactgtgtcct
tctcatctttagtctgattgccaaaccccggactgagagaagtggacaaa
tgggagctcagccatccgagctacctggacacttttttagagtgatcaca
gtgtaatgttggaaagcttccggggactgaatagtgagtgttccttttcc
tgaagaagggctgaatttccttaccaggggaagtcctacctaaccactct
tcatatttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_59145780_59146626
seq2: B6Ng01-164B19.b_44_890 (reverse)

seq1  TGTACACACACATACACACTTATATAAATACACACATATCACTACTTATC  50
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCACACACATACACACTTATATAAATACACACATATCACTACTTATC  50

seq1  AGGTTCTCAAGCTTGCTAGGAAGGAGCTAATATTTTCTTTGCTTCATAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCTCAAGCTTGCTAGGAAGGAGCTAATATTTTCTTTGCTTCATAGA  100

seq1  GTCCTTTCCTGGACATATTATTATGTGTTGGGCCATCATTTATGACTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTTCCTGGACATATTATTATGTGTTGGGCCATCATTTATGACTGTT  150

seq1  TTCTTTTTAGAAGATGTATTTTATTATATATGATTTCTGTGAATGCTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTAGAAGATGTATTTTATTATATATGATTTCTGTGAATGCTTGT  200

seq1  GTGTAGTGTGTGTCTGTGTGTAGTGTGTGTCTGTGTGTGTGGGGTGCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGTGTGTGTCTGTGTGTAGTGTGTGTCTGTGTGTGTGGGGTGCCCA  250

seq1  TAAAGGTGAGAAAAAGGTGCTTGAGACCCTGGTGCTGGAGTTCCAGGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGTGAGAAAAAGGTGCTTGAGACCCTGGTGCTGGAGTTCCAGGCAG  300

seq1  TTGTGAGCTGTCTGACAAGGGTGTTCTAATCCAAACTTGGGTCCCCGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAGCTGTCTGACAAGGGTGTTCTAATCCAAACTTGGGTCCCCGGAA  350

seq1  AGAGCCGTAAATGCTTAGAGGAACATATAATCTAGCAAATGCTTTAGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCGTAAATGCTTAGAGGAACATATAATCTAGCAAATGCTTTAGTAT  400

seq1  CTCTCCAGCCCCCATTAACAGCTATACCCACACCAACCCTTCCATGTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCAGCCCCCATTAACAGCTATACCCACACCAACCCTTCCATGTTCA  450

seq1  CATTAACATTTCATTTAAATGCTCAGGTTCAAGAAAATTAAAAAATTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAACATTTCATTTAAATGCTCAGGTTCAAGAAAATTAAAAAATTCTA  500

seq1  ATGCTAAAATATAAGTTAGTTATATTTGAAGAACAATCAATCGATGTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAAAATATAAGTTAGTTATATTTGAAGAACAATCAATCGATGTTGG  550

seq1  ACAGTCAATGAAACTGAAGTCATTTTCAATAAGTGAGTTGTTCTAAAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCAATGAAACTGAAGTCATTTTCAATAAGTGAGTTGTTCTAAAAGG  600

seq1  AGAGTCAGATGAAATCTTTGGGAGGTGAAATGAAATTGTTCATTTGTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCAGATGAAATCTTTGGGAGGTGAAATGAAATTGTTCATTTGTTTT  650

seq1  GTTGTTTGTTTTGCTTTGCCTTAACAGAATAAGAGACAAACCATTCATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTGTTTTGCTTTGCCTTAACAGAATAAGAGACAAACCATTCATAT  700

seq1  CTGCCAGCGGTCATTTAGGAAAGACAAGATGTACTAAGCTGAAACAGATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAGCGGTCATTTAGGAAAGACAAGATGTACTAAGCTGAAACAGATT  750

seq1  CTCAAACCTTCATTTAAAAAATATGTAATAATAGTGAATGTTCCACGCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAACCTTCATTTAAAAAATATGTAATAATAGTGAATGTTCCACGCCA  800

seq1  CCCCATTTCCCAGGTTGTGACATACAGCGTTTTACAATACAGAATTC  847
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATTTCCCAGGTTGTGACATACAGCGTTTTACAATACAGAATTC  847

seq1: chr18_59003366_59004483
seq2: B6Ng01-164B19.g_67_1176

seq1  GAATTCTTTAAACTTTCATCAGTGGCCCTTTACATCACAAAACGTAGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAAACTTTCATCAGTGGCCCTTTACATCACAAAACGTAGATG  50

seq1  GCTTGGAGAACAGAAAGTACAATAATTACTGCTGATTGGAAGAATACAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGAGAACAGAAAGTACAATAATTACTGCTGATTGGAAGAATACAGG  100

seq1  ATTGATCTATATTGATGATAGTGAGAGCAAGTTCCTTGCTCATATATAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATCTATATTGATGATAGTGAGAGCAAGTTCCTTGCTCATATATAGA  150

seq1  TCTGTGTCTTAGACTTGAGACAATTCCATCATGGGCTAAATCTTCAAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTCTTAGACTTGAGACAATTCCATCATGGGCTAAATCTTCAAAAG  200

seq1  AAAATTTACATTTACTTATCTAATACTTATTTTCTTAAACTTTACTAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTACATTTACTTATCTAATACTTATTTTCTTAAACTTTACTAACT  250

seq1  GAATCATAAACAGCATATTAAAGATTGTATTTTATTTTATTTTATTTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCATAAACAGCATATTAAAGATTGTATTTTATTTTATTTTATTTTAT  300

seq1  TTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATGTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATGTGTA  350

seq1  TAAGTGTTTACGTATATGCCTGTGCATCACATGTATGCCGGGTGCCCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGTTTACGTATATGCCTGTGCATCACATGTATGCCGGGTGCCCTGG  400

seq1  GAAGTCAGAATAGATTGCCCGAATCTCTGGAACTGGAAATGTGGACAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCAGAATAGATTGCCCGAATCTCTGGAACTGGAAATGTGGACAGTT  450

seq1  GTGAGCCACCATGAAGGTGCTGGGAATTGAACTCAGAACCTCTGCAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCCACCATGAAGGTGCTGGGAATTGAACTCAGAACCTCTGCAAAAT  500

seq1  AAACATAAGATTGTCAATGCTGAACCATCTTTCCAGTCCCACAAGCATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATAAGATTGTCAATGCTGAACCATCTTTCCAGTCCCACAAGCATGT  550

seq1  TTTAAAAATTATATAGAAGTCTTAAACTATTTGTAAAGCAGTACTAAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAATTATATAGAAGTCTTAAACTATTTGTAAAGCAGTACTAAACA  600

seq1  GTGCATGCACATTGAAGCTCATTAGGAAGGAAATTTTTTTTCATTTAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATGCACATTGAAGCTCATTAGGAAGGAAATTTTTTTTCATTTAATA  650

seq1  GTAATTATACCTCTCTAGATAGTTTATAATATTTCTAATTGAGTAAATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTATACCTCTCTAGATAGTTTATAATATTTCTAATTGAGTAAATAA  700

seq1  ATAATAGGAAAAGGAGTGTTCTTG-TTGGGAAGTTGGTTAAATTAGGAAA  749
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATAATAGGAAAAGGAGTGTTCTTGTTTGGGAAGTTGGTTAAATTAGGAAA  750

seq1  GTAATTCATGTGTATTTACAAATGACGGGATGAATAGCAATCCCTTTAGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTCATGTGTATTTACAAATGACGGGATGAATAGCAATCCCTTTAGG  800

seq1  TTTATGGTTTGGGGTGGCTTTTAGGTTCCCTAGACAAATGAAGAACACAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGGTTTGGGGTGGCTTTTAGGTTCCCTAGACAAATGAAGAACACAA  850

seq1  TTTAATACAGATTACAGTGTGAGGCTCCAGTTAGCACATCACTGTGTCCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATACAGATTACAGTGTGAGGCTCCAGTTAGCACATCACTGTGTCCT  900

seq1  TCTCATCTTTAGTCTGA-TGCCAAACCCCGGACTGAGAGAAGTGACAAAA  948
      ||||||||||||||||| ||||||||||||||||||||||||||   |||
seq2  TCTCATCTTTAGTCTGATTGCCAAACCCCGGACTGAGAGAAGTGGACAAA  950

seq1  TGGGAGCTCAGCCAATCCGAGCTACCCGGACACTTTTATAGAGTGATCAC  998
      ||||||||||||| |||||||||||| |||||||||| ||||||||||||
seq2  TGGGAGCTCAGCC-ATCCGAGCTACCTGGACACTTTTTTAGAGTGATCAC  999

seq1  -GTGTTAGTGTTGGAAAGCTCCTGGGGACTGAATAGTTGAGTGTTCATTT  1047
       ||| || |||||||||||| | ||||||||||||| ||||||||| |||
seq2  AGTG-TAATGTTGGAAAGCTTCCGGGGACTGAATAG-TGAGTGTTCCTTT  1047

seq1  GTCCAGGAAGAGGGGCTTGATTTCCTATCACAGGTGTAAATGTCTATACT  1097
       |||  ||||| |||||  ||||||| |  |||| |   | |||  ||| 
seq2  -TCC-TGAAGAAGGGCTGAATTTCCT-TACCAGGGG---AAGTC-CTACC  1090

seq1  AAACCAACTCTTCATATTTTA  1118
       |||| |||||||||||||||
seq2  TAACC-ACTCTTCATATTTTA  1110