BAC Information

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BAC

Clone NameB6Ng01-168I16
Chromosome18 (Build37)
Map Location 58,524,392 - 58,694,163
singlet/doubletdoublet
Overlap genenone
Upstream genePrrc1, 1700011I03Rik, 4930511M06Rik, 2210409D07Rik, Slc12a2, 9330166H04Rik, Fbn2
Downstream geneSlc27a6, Isoc1, Adamts19, A730017C20Rik, 4833446K15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168I16.bB6Ng01-168I16.g
ACCDH959753DH959754
length978396
definitionDH959753|Mus musculus domesticus DNA, BAC clone: B6Ng01-168I16, 5' end.DH959754|Mus musculus domesticus DNA, BAC clone: B6Ng01-168I16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,693,611 - 58,694,163)(58,524,392 - 58,524,793)
sequence
gaattcttcccattatcctttcccccaaagccagaggctggagcctaact
cttgtttttattaacatgtttattacatatcgaccatatccttgcatatt
ttcatacatgcacacagccttcatctcttctgctttgttcttcctattcc
acatactcttactgattctagtaattactattgaattttcaggtcaacat
ctttctttcttccttccttccttccttcctctctctctctctctctctct
ctctctctctctctctctctttctttctttctttcaacactccgaatttt
attcccctcctagtccaccttcaaactgttccacatcccatacctcctcc
ctgcccccctgtctccaggaaaatacccccaccctctcccctatcccatc
agacctctaaacttcctggggcctccagtctcttgagggttaggtgcatc
ttctctgactgaacccagacccagtagtcctctgttgtataggtgttgga
ggcctcatatcagctggtgtatgcttcctggtcggtgatccagtgtctga
gagatcttgggggtccaggttaattgagactgctggtcctcctacagggc
tgcccttctcctcaggttcttccagcttttccctaattcaaccacagggg
tcagcagcttctgtccattggttgggtgcaaatatctgcatctgactctt
ttcagctgcctgttgggtctttcagaggacagtcttgataggtctctttt
cgatgagcgctccatagcctcagtaatagtgtcaggccttggggcctccc
cttgagctggatcccaatttgggactgttgctggacctttttttcctcaa
gctcttctccatttccatccctgcagttctttcagcaggaaaattatggg
tcagaattttgactgtgggatggcacctcctccctcacttgatgtcctgt
cttcttgctggagtggattctataagtt
catttacagatgtgagagataatgcagccaaatgaaaagtccacgcgtgg
ggggtttaaatgaacatgggataaactaaggggaccatgaagaaaagcag
gaatcattttttacttaaaatgagctagatagaacttccaagtgtgaaaa
aaagaaatcatttagacacgaattggaatgactaaacaacagatttttcg
cagccaaaaataatcaactggaagaccaattccaagagaggatccagatt
acagaaagaaccatggactgtggagagacatgagacagagcaaagacatg
aaattcacagaaaatccatacttttaaaaaatgttttgtgtgtatgtatg
tgatatgtatcttatatgtgatatggtgtgtgtgtgtgtatgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_58693611_58694163
seq2: B6Ng01-168I16.b_43_595 (reverse)

seq1  CTCTCAGACACTGGATCACCGACCAGGAAGCATACACCAGCTGATATGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAGACACTGGATCACCGACCAGGAAGCATACACCAGCTGATATGAG  50

seq1  GCCTCCAACACCTATACAACAGAGGACTACTGGGTCTGGGTTCAGTCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCAACACCTATACAACAGAGGACTACTGGGTCTGGGTTCAGTCAGA  100

seq1  GAAGATGCACCTAACCCTCAAGAGACTGGAGGCCCCAGGAAGTTTAGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATGCACCTAACCCTCAAGAGACTGGAGGCCCCAGGAAGTTTAGAGG  150

seq1  TCTGATGGGATAGGGGAGAGGGTGGGGGTATTTTCCTGGAGACAGGGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATGGGATAGGGGAGAGGGTGGGGGTATTTTCCTGGAGACAGGGGGG  200

seq1  CAGGGAGGAGGTATGGGATGTGGAACAGTTTGAAGGTGGACTAGGAGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGGAGGTATGGGATGTGGAACAGTTTGAAGGTGGACTAGGAGGGG  250

seq1  AATAAAATTCGGAGTGTTGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATTCGGAGTGTTGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGA  300

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGGAAGGAAGGAAGGAAGGAAGAAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGGAAGGAAGGAAGGAAGGAAGAAAGA  350

seq1  AAGATGTTGACCTGAAAATTCAATAGTAATTACTAGAATCAGTAAGAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGTTGACCTGAAAATTCAATAGTAATTACTAGAATCAGTAAGAGTA  400

seq1  TGTGGAATAGGAAGAACAAAGCAGAAGAGATGAAGGCTGTGTGCATGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAATAGGAAGAACAAAGCAGAAGAGATGAAGGCTGTGTGCATGTAT  450

seq1  GAAAATATGCAAGGATATGGTCGATATGTAATAAACATGTTAATAAAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATATGCAAGGATATGGTCGATATGTAATAAACATGTTAATAAAAAC  500

seq1  AAGAGTTAGGCTCCAGCCTCTGGCTTTGGGGGAAAGGATAATGGGAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTTAGGCTCCAGCCTCTGGCTTTGGGGGAAAGGATAATGGGAAGAA  550

seq1  TTC  553
      |||
seq2  TTC  553

seq1: chr18_58524392_58524793
seq2: B6Ng01-168I16.g_70_471

seq1  GAATTCCATTTACAGATGTGAGAGATAATGCAGCCAAATGAAAAGTCCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTTACAGATGTGAGAGATAATGCAGCCAAATGAAAAGTCCAC  50

seq1  GCGTGGGGGGTTTAAATGAACATGGGATAAACTAAGGGGACCATGAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGGGGGGTTTAAATGAACATGGGATAAACTAAGGGGACCATGAAGAA  100

seq1  AAGCAGGAATCATTTTTTACTTAAAATGAGCTAGATAGAACTTCCAAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGGAATCATTTTTTACTTAAAATGAGCTAGATAGAACTTCCAAGTG  150

seq1  TGAAAAAAAGAAATCATTTAGACACGAATTGGAATGACTAAACAACAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAAAAGAAATCATTTAGACACGAATTGGAATGACTAAACAACAGAT  200

seq1  TTTTCGCAGCCAAAAATAATCAACTGGAAGACCAATTCCAAGAGAGGATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCGCAGCCAAAAATAATCAACTGGAAGACCAATTCCAAGAGAGGATC  250

seq1  CAGATTACAGAAAGAACCATGGACTGTGGAGAGACATGAGACAGAGCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTACAGAAAGAACCATGGACTGTGGAGAGACATGAGACAGAGCAAA  300

seq1  GACATGAAATTCACAGAAAATCCATACTTTTAAAAAATGTTTTGTGTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGAAATTCACAGAAAATCCATACTTTTAAAAAATGTTTTGTGTGTA  350

seq1  TGTATGTGATATGTATCTTATATGTGATATGGTGTGTGTGTGTGTATGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTGATATGTATCTTATATGTGATATGGTGTGTGTGTGTGTATGTG  400

seq1  TG  402
      ||
seq2  TG  402