BAC Information

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BAC

Clone NameB6Ng01-168N09
Chromosome18 (Build37)
Map Location 14,975,952 - 14,977,131
singlet/doubletsinglet
Overlap geneTaf4b
Upstream geneZfp521, LOC100040094, LOC100040103, LOC100040391, LOC382096, LOC100040129, EG623867, Ss18, LOC100040446, Psma8
Downstream geneLOC669965, Kctd1, EG622268, LOC100040151, Aqp4, LOC665473, Chst9, LOC670012
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168N09.bB6Ng01-168N09.g
ACCDH959973DH959974
length1,160705
definitionDH959973|Mus musculus domesticus DNA, BAC clone: B6Ng01-168N09, 5' end.DH959974|Mus musculus domesticus DNA, BAC clone: B6Ng01-168N09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttacttgaagtttaattagaaatcttattcaaaagcctaagtta
taaaattctccaaaactgcggggcagtggtggtgcacacctttaatccca
gccctcgggaggcagaggcaggcggatttctgagttcaaggccagcctgg
tctacagagtgagttccaggacagccagggctacacagagaaaccctgtc
ttgaaaaacaaaaaaacaaacaaacaaattccccaaaattatattaacca
aaaataaatattaaaaaaatcttaagctcataatgatcatatcataatta
tcataatatcattatcattggctgactacagagcaaaatctaaaagattc
cattgatgctaagtttattaaagaaaagtagtctttagggaaggcttgtc
tcagaaaggccctactgtaagcagatgctctcttccttaaagctagactc
caaaacagattatcaggtctgacaagctagccactgctcatgaatgaaaa
aggaaagaaaggcatgtcaataaagcatgtgatgaagaatggctgagtgg
aactccagggcccatgtagcagtgaccacaggtcatccaggagttctcgg
aatacatgccaaagtttcagaaaacctttagccactccactttggagttt
ttgatttaagtcccgtggtgtaatttgcagatatgtgatctgattagtga
gaaaccaagctcttttcaaagtcagatcctcttaaaccatttttccagaa
cccatgaggtaattatgctctattctcctcttgatgtaagagctgcaaag
aaactgatctaatcttactcagacttttagtaaatgtaagaaatcataaa
caattgactttgtatcatactctgtcaaattgtgtctatatggtttaacg
atgttgagattatatttaaaggcagtgcctggcaagacaatgccctgaat
tagataaagttatcattcaccaaaaatagaattattaacgtaagctataa
aattctacactgacagccagtgcatattcttcataacatatcctttcaaa
tgagtagctgaccactgataggatccatgtgaagatttttgttttcatgc
actcttggaattacccagatgtcccaccatgccagggcacgtgttccata
ggtcatagtg

gaattcatgagattattaggcaaatggatagaactagaaaatatcatcct
gagtgaggtaacccattcacaaaagaacacacatgcactcactgataagt
ggatatttgcccaaaagctccaaataagcaggatacagttcacagactgc
atgaagctcaataagaaggaagaccaaagtgtgggtgctttggtccttct
tagaaggggaacaaaatactcacaggagcaaatatagagataaagtgtta
agcagagactgaggaagggccacccagagactgtcctacatgggaagtca
tcccatacacagttaccaaacccagacactattgtggatgccaagaagtt
cttgatgacaggagcctgatatagctgtctcctgagaggccctgccagta
ccttacaaatacagaggctgatgttcgcagccaaccaggactgagcacga
ggtccacaatggaaggactgaaggatttgaatggatttgcaaccccatag
gaagaacaacaatatcaaccaaccagaacccccagaacttcctgggacta
agccatcaacaaaggagtacacatggctccagctgaatatgtagcagagg
atggtcttgtcatgcatcagtgggaggagaggtccttggtcctatgaagg
ttcgatagatgccccagtgtaggggaatctaggacgggggaggtgggagt
gggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_14975952_14977131
seq2: B6Ng01-168N09.b_47_1206 (reverse)

seq1  CACTATGAACATAGTGGAACACGTGCCCCTGTGGCATGGTGGGACATCTT  50
      ||||||| || || ||||||||||||||   ||||||||||||||||| |
seq2  CACTATG-ACCTA-TGGAACACGTGCCC---TGGCATGGTGGGACATC-T  44

seq1  GGGTATATTCCCAAGAGTGGCCATTTAAAAACAAAAATCTTCACATTGGA  100
      ||||| ||| |||||||||  ||  | |||||||||||||||||| ||||
seq2  GGGTA-ATT-CCAAGAGTG--CA--TGAAAACAAAAATCTTCACA-TGGA  87

seq1  TCCTATCAGTGGTCAAGCTACTCATTTTGAAAAGGATATGTTATGAAGAA  150
      |||||||||||||| ||||||||||||   ||||||||||||||||||||
seq2  TCCTATCAGTGGTC-AGCTACTCATTT--GAAAGGATATGTTATGAAGAA  134

seq1  TATGCACCTGGCTGTCAGGTGTAGAATTTTTATAGCTTACGTTAATAATT  200
      |||||| |||||||||| |||||||| |||||||||||||||||||||||
seq2  TATGCA-CTGGCTGTCA-GTGTAGAA-TTTTATAGCTTACGTTAATAATT  181

seq1  CTATTTTTGGTGAATGATAACTTTATCTAATTCAGGGCATTGTCTTGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTTGGTGAATGATAACTTTATCTAATTCAGGGCATTGTCTTGCCA  231

seq1  GGCACTGCCTTAAAATATAATCTCAACATCGTTAAAACCATATAGACACA  300
      ||||||||||| ||||||||||||||||||||| ||||||||||||||||
seq2  GGCACTGCCTTTAAATATAATCTCAACATCGTT-AAACCATATAGACACA  280

seq1  ATTTGACAGAGTATGATACAAAGTCAATTGTTTATGATTTCTTACATTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGACAGAGTATGATACAAAGTCAATTGTTTATGATTTCTTACATTTA  330

seq1  CTAAAAGTCTGAGTAAGATTAGATCAGTTTCTTTGCAGCTCTTACATCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAGTCTGAGTAAGATTAGATCAGTTTCTTTGCAGCTCTTACATCAA  380

seq1  GAGGAGAATAGAGCATAATTACCTCATGGGTTCTGGAAAAATGGTTTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGAATAGAGCATAATTACCTCATGGGTTCTGGAAAAATGGTTTAAG  430

seq1  AGGATCTGACTTTGAAAAGAGCTTGGTTTCTCACTAATCAGATCACATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCTGACTTTGAAAAGAGCTTGGTTTCTCACTAATCAGATCACATAT  480

seq1  CTGCAAATTACACCACGGGACTTAAATCAAAAACTCCAAAGTGGAGTGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAATTACACCACGGGACTTAAATCAAAAACTCCAAAGTGGAGTGGC  530

seq1  TAAAGGTTTTCTGAAACTTTGGCATGTATTCCGAGAACTCCTGGATGACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGTTTTCTGAAACTTTGGCATGTATTCCGAGAACTCCTGGATGACC  580

seq1  TGTGGTCACTGCTACATGGGCCCTGGAGTTCCACTCAGCCATTCTTCATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTCACTGCTACATGGGCCCTGGAGTTCCACTCAGCCATTCTTCATC  630

seq1  ACATGCTTTATTGACATGCCTTTCTTTCCTTTTTCATTCATGAGCAGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCTTTATTGACATGCCTTTCTTTCCTTTTTCATTCATGAGCAGTGG  680

seq1  CTAGCTTGTCAGACCTGATAATCTGTTTTGGAGTCTAGCTTTAAGGAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTTGTCAGACCTGATAATCTGTTTTGGAGTCTAGCTTTAAGGAAGA  730

seq1  GAGCATCTGCTTACAGTAGGGCCTTTCTGAGACAAGCCTTCCCTAAAGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATCTGCTTACAGTAGGGCCTTTCTGAGACAAGCCTTCCCTAAAGAC  780

seq1  TACTTTTCTTTAATAAACTTAGCATCAATGGAATCTTTTAGATTTTGCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTCTTTAATAAACTTAGCATCAATGGAATCTTTTAGATTTTGCTC  830

seq1  TGTAGTCAGCCAATGATAATGATATTATGATAATTATGATATGATCATTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTCAGCCAATGATAATGATATTATGATAATTATGATATGATCATTA  880

seq1  TGAGCTTAAGATTTTTTTAATATTTATTTTTGGTTAATATAATTTTGGGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTTAAGATTTTTTTAATATTTATTTTTGGTTAATATAATTTTGGGG  930

seq1  AATTTGTTTGTTTGTTTTTTTGTTTTTCAAGACAGGGTTTCTCTGTGTAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTTTGTTTGTTTTTTTGTTTTTCAAGACAGGGTTTCTCTGTGTAG  980

seq1  CCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTTGAACTCA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTTGAACTCA  1030

seq1  GAAATCCGCCTGCCTCTGCCTCCCGAGGGCTGGGATTAAAGGTGTGCACC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCCGCCTGCCTCTGCCTCCCGAGGGCTGGGATTAAAGGTGTGCACC  1080

seq1  ACCACTGCCCCGCAGTTTTGGAGAATTTTATAACTTAGGCTTTTGAATAA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTGCCCCGCAGTTTTGGAGAATTTTATAACTTAGGCTTTTGAATAA  1130

seq1  GATTTCTAATTAAACTTCAAGTAAGAATTC  1180
      ||||||||||||||||||||||||||||||
seq2  GATTTCTAATTAAACTTCAAGTAAGAATTC  1160


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