BAC Information

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BAC

Clone NameB6Ng01-171H19
Chromosome18 (Build37)
Map Location 41,362,882 - 41,363,988
singlet/doubletsinglet
Overlap genenone
Upstream geneYipf5, Kctd16, EG225416
Downstream geneLOC677182, LOC100041988, LOC100041997, Prelid2, Gm851, Sh3rf2, EG435561, Plac8l1, LOC433177, Lars
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-171H19.bB6Ng01-171H19.g
ACCGA000359GA000360
length1,1151,183
definitionB6Ng01-171H19.b B6Ng01-171H19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgcttggccacactttttcttagtctgactttggtacttttaga
ggacattgaccaaaaggtgtgaaaagctctgggctacctgtcactctgag
gacatcaatatctgtaaatgggtgttttagagcttaggaagaacccacat
ctacattggtaaaggaaaacactagagtgcttcaaggctagactggggtc
aatattctttaaccaccagtatcaagaaacaggaggtcacctggctactg
cagaagtaccaaaaaatattttggaagtgtgaataagctctggaataaat
gttttcttttcttataaataattgctaggtgtcttattggtcataacatt
aaaattcaaatatttacctgagattaactagtttattcagggatagagga
aataaaataaaatcttcaaatgcttaagatagtggagtgacataaagaaa
tgttttatataacaacaatgaaatgattaaagaaaaagtgacagaggtaa
cagaagaggttatagaacttgaaagagcatctaataggtacagatgaatt
ttctcacttgacggttaatattcggtgataattttctgaccaagaaatat
actacaggaaatgggatgggaaatcagggcagagaaatgggttgtgagaa
agataatgaacactaacgatggtagaaaagccttatggaaacctactatc
atataaatgtctacatatgcatacatgaatattttcacgtaaagaagttc
attggaattaccctgtgtgaattgtatgcttttccaagaaatcataattt
gccaaataaaagtttcagtgatagatccaagacagttgttggtcagagtt
atctcagaacatggaaaacatcaaattaatattagcaaggaatctctttt
actcatcggctagatttcattgtacttaaacgggatacatgttgcttatg
ttgggattattggtcacagttttactcagaatatcacatcaatgaactta
taataatggcctaacatgggagtatatgagttccaattacgtggcaccaa
atattattgggggtacccaccacttttgaatgaacttaagcccacctcat
atgaagaacatatat
gaattcagagaatcttgtgaaattcagaagaattaaaagagtcatggagg
tcaaggacaccacaagaaaacgtacagaatcaactatcatgtacacataa
gggctcacagggactggaccaccatccagaaagcatgcatgggatggagt
tagtcccctacacttatataatacaagtacaacttcttcctcttgtggga
cctctaaaggtaggaataggaacgtctgacttcactgcttcactttggat
ccattttccctaagtagactgccttgtctagtctccattgaagatgatgc
acccagtcctactatgacttggtaggccaaggctggttgatacctatggg
agtattctcctactctgagaataaagggagagagctatagtgggaggaga
gaggaaaaggagaagctgggaggaacagatggaagggaagctctaatcag
gatagaaagtaaattacttaatgaaaagaatgtttgctattttatttatg
tttgcatgaagaaatctatgtgtagatatgtgcatgtgacctcagattcc
ttcagatgccatgggggccgatgtcctggaactagagttataggaggctg
ggaaccatttcacctaggttcttaaaactgacattgggtcctctttaata
ggcctgcttactcttaaccactgagccctctccagttccaataatacctt
tacttttatcattgtgttctcattcatatctcaagtgctttcaagggatt
tttttagtgattgcaatacatgtctttattatgctatcttccaataacat
cacaaactctttactttttattactagcattattagaattatggatattt
tcatcatcccttccatattatctgtattattcttaccatattattcttac
catacttaccatttccacttaatattaaaactcacaatgcaatttaaaga
cttgtaagtaataatgagatgaaatgctctctgagccatttccacttgca
taccctccaggcagttacctgcctactgactcatgattcctgttaatttt
ccaatatgttagtcatgaatttcaggtggaaaggactccaccagcatgga
attcatgcatgttataattagtttataggtctagatgtgcacacacatat
ctcaactcgaacatggtgacgataaagagcgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_41362882_41363988
seq2: B6Ng01-171H19.b_42_1156

seq1  GAATTCTGCTTGGCCACACTTTTTCTTAGTCTGACTTTGGTACTTTTAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCTTGGCCACACTTTTTCTTAGTCTGACTTTGGTACTTTTAGA  50

seq1  GGACATTGACCAAAAGGTGTGAAAAGCTCTGGGCTACCTGTCACTCTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATTGACCAAAAGGTGTGAAAAGCTCTGGGCTACCTGTCACTCTGAG  100

seq1  GACATCAATATCTGTAAATGGGTGTTTTAGAGCTTAGGAAGAACCCACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCAATATCTGTAAATGGGTGTTTTAGAGCTTAGGAAGAACCCACAT  150

seq1  CTACATTGGTAAAGGAAAACACTAGAGTGCTTCAAGGCTAGACTGGGGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATTGGTAAAGGAAAACACTAGAGTGCTTCAAGGCTAGACTGGGGTC  200

seq1  AATATTCTTTAACCACCAGTATCAAGAAACAGGAGGTCACCTGGCTACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCTTTAACCACCAGTATCAAGAAACAGGAGGTCACCTGGCTACTG  250

seq1  CAGAAGTACCAAAAAATATTTTGGAAGTGTGAATAAGCTCTGGAATAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTACCAAAAAATATTTTGGAAGTGTGAATAAGCTCTGGAATAAAT  300

seq1  GTTTTCTTTTCTTATAAATAATTGCTAGGTGTCTTATTGGTCATAACATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTTTTCTTATAAATAATTGCTAGGTGTCTTATTGGTCATAACATT  350

seq1  AAAATTCAAATATTTACCTGAGATTAACTAGTTTATTCAGGGATAGAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCAAATATTTACCTGAGATTAACTAGTTTATTCAGGGATAGAGGA  400

seq1  AATAAAATAAAATCTTCAAATGCTTAAGATAGTGGAGTGACATAAAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATAAAATCTTCAAATGCTTAAGATAGTGGAGTGACATAAAGAAA  450

seq1  TGTTTTATATAACAACAATGAAATGATTAAAGAAAAAGTGACAGAGGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTATATAACAACAATGAAATGATTAAAGAAAAAGTGACAGAGGTAA  500

seq1  CAGAAGAGGTTATAGAACTTGAAAGAGCATCTAATAGGTACAGATGAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGAGGTTATAGAACTTGAAAGAGCATCTAATAGGTACAGATGAATT  550

seq1  TTCTCACTTGACGGTTAATATTCGGTGATAATTTTCTGACCAAGAAATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACTTGACGGTTAATATTCGGTGATAATTTTCTGACCAAGAAATAT  600

seq1  ACTACAGGAAATGGGATGGGAAATCAGGGCAGAGAAATGGGTTGTGAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAGGAAATGGGATGGGAAATCAGGGCAGAGAAATGGGTTGTGAGAA  650

seq1  AGATAATGAACACTAACGATGGTAGAAAAGCCTTATGGAAACCTACTATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATGAACACTAACGATGGTAGAAAAGCCTTATGGAAACCTACTATC  700

seq1  ATATAAATGTCTACATATGCATACATGAATATTTTCACGTAAAGAAGTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAATGTCTACATATGCATACATGAATATTTTCACGTAAAGAAGTTC  750

seq1  ATTGGAATTACCCTGTGTGAATTGTATGCTTTTCCAAGAAATCATAATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAATTACCCTGTGTGAATTGTATGCTTTTCCAAGAAATCATAATTT  800

seq1  GCCAAATAAAAGTTTCAGTGATAGATCCAAGACAGTTGTTGGTCAGAGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAATAAAAGTTTCAGTGATAGATCCAAGACAGTTGTTGGTCAGAGTT  850

seq1  ATCTCAGAACATGG-AAACATCAAATTAATATTAGCAAGGAATCTC-TTT  898
      |||||||||||||| ||||||||||||||||||||||||||||||| |||
seq2  ATCTCAGAACATGGAAAACATCAAATTAATATTAGCAAGGAATCTCTTTT  900

seq1  ACTCATCGGCTAGATTTCATTGTACTTAAACGGGATACATG-TGCTATTG  947
      ||||||||||||||||||||||||||||||||||||||||| ||||  ||
seq2  ACTCATCGGCTAGATTTCATTGTACTTAAACGGGATACATGTTGCTTATG  950

seq1  TTGGGA-TATTTGTCAACAGTTTTACCCAG-ATATCAACACCATGAAC-T  994
      |||||| |||| ||| |||||||||| ||| ||||||   | |||||| |
seq2  TTGGGATTATTGGTC-ACAGTTTTACTCAGAATATCACATCAATGAACTT  999

seq1  ATAATAATGGCCT-ACATGGAAGT-TATGAG-TACAAT--AGTGGCA-CA  1038
      ||||||||||||| |||||| ||| |||||| | ||||   |||||| ||
seq2  ATAATAATGGCCTAACATGGGAGTATATGAGTTCCAATTACGTGGCACCA  1049

seq1  AATATTATGGGGGTAACCCACCACTTTTTGATGAAATTTAAAGCCCACTC  1088
      |||||||| ||||  |||||||||||||  ||||| ||  ||||||||  
seq2  AATATTATTGGGGGTACCCACCACTTTTGAATGAACTT--AAGCCCACCT  1097

seq1  AATATGAGGAAACATATAT  1107
       |||||| | |||||||||
seq2  CATATGAAG-AACATATAT  1115