BAC Information

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BAC

Clone NameB6Ng01-172K18
Chromosome18 (Build37)
Map Location 14,365,893 - 14,515,570
singlet/doubletdoublet
Overlap geneLOC100040103, LOC100040391
Upstream geneLOC665379, LOC100040358, Zfp521, LOC100040094
Downstream geneLOC382096, LOC100040129, EG623867, Ss18, LOC100040446, Psma8, Taf4b, LOC669965, Kctd1, EG622268, LOC100040151
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-172K18.bB6Ng01-172K18.g
ACCGA001227GA001228
length7611,154
definitionB6Ng01-172K18.b B6Ng01-172K18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,514,811 - 14,515,570)(14,365,893 - 14,367,049)
sequence
gaattcagaggtattataggtcaagtctatggtgagtttattgttagtat
ttaatatttatggagtacccagagccatgagccagtgtgttacctgtttt
cattaggcaaaagtactctgcttgttcattcactagagtttctcaaagaa
atagctatctaatttgaatttataacaacctggttagttttcatttcatt
tatattctaggaacaattttcaaataaaacatctggtgtccagataggat
ggctctaaatctgggaaactgaaagcctatgctttgccaacaaggttgca
tgatcaaggagaatagacaatgcattgaaatgggttctctcagcttcttt
cccatggccagaggccattctgggaaatgaacaaaaggcctaagagaggg
ggctgctggagatgttaaagctttgtgtataatccatttaacaaatgact
ctgtaaatgaaggtatatgcaggcaaatgttcaaagaatgagttgacctc
ttcttcattttgaatggcagtgaggtcaaataaatggcagggaagggaag
ccattttggatgctacactttctggtgggagttagtcatcttctgtttct
gtgtcagtgaaatgagtgaaggaatgaatactttcttatctactggactc
atctacaggaagatgggggagtgttcagataggttttcaggctgtgctgt
ctgtatcccagacatacgcgaggagggtgcagaagtggatggtgagttag
tggggtggtgg
gaattcaggagctccggccctgccggagaggtggaaggcagagagtggcc
acaggaccatgccagggcagagatgcggccagtagagtgggaaacacgtt
ggtccttttttaatatttctggcaacactaatatatgcttttaaaacatt
ttttttaaaaataaggctgctgagatgacacagaggagaaagaagaggtc
ttttcaaagtgtaacctgcacacacaaaataaaattgcttcattattata
agatataaaaataagctaaagatacaagtgaaagttttgaaactataaaa
attctagtgtgcattggaagaaagtttctcctcccaatgatttcttagac
ataacaccaaaatcacagacaaaaataaacaaaaaacaaaacaaataaaa
agctcagcaaaaacagacagactattttaaatgtcaaaaccttgatctag
caaaggaatggccaacagcctgggaaggcaatctatgttatccaagcaaa
tatctggaaactatacatcccatgaaagcacagcatctagagagaatccc
tgtaactcttcggcaattaaacaagtgacccagtaaaaaaagggggcaag
gaatacagacagatatttctcagtaacacaggcttgtctgtcactccaag
tataagggaagctgagtcaggaaggttcaaggttcaaggccacggctagg
agctatggttcaatggcagaggtttgatcagcataaaatttaaaggcaag
attggacaacatcagttcaaggccagcctgggcaaactctgtctcaagta
aaagtctaagaaggactgggaatctagctcagtggtagtacagtatctgt
caagtctgtgagagggcctcagttcagccttcaataccaaaaacaaaata
aagtatcatcaaaggaaacaaaccccagatacacagagacagcaaatgtc
agcagggcccagagaaatggagttctgtgcactgctagggtgggtgtatt
accgcagctattactagaaagcagtactgaggtcgtcaaggacttaaagg
aggattcaagtgtcagccatcttctcaggaagacggtccttagacctcag
gtccactgcagggttttcagctataggaactacaataaatgttcactgac
agtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_14514811_14515570
seq2: B6Ng01-172K18.b_47_807 (reverse)

seq1  CCACCA-CCCACTAACTCACCATCCACTTCTGCACCCTCCTCGCGTATGT  49
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACCCCACTAACTCACCATCCACTTCTGCACCCTCCTCGCGTATGT  50

seq1  CTGGGATACAGACAGCACAGCCTGAAAACCTATCTGAACACTCCCCCATC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATACAGACAGCACAGCCTGAAAACCTATCTGAACACTCCCCCATC  100

seq1  TTCCTGTAGATGAGTCCAGTAGATAAGAAAGTATTCATTCCTTCACTCAT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTAGATGAGTCCAGTAGATAAGAAAGTATTCATTCCTTCACTCAT  150

seq1  TTCACTGACACAGAAACAGAAGATGACTAACTCCCACCAGAAAGTGTAGC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGACACAGAAACAGAAGATGACTAACTCCCACCAGAAAGTGTAGC  200

seq1  ATCCAAAATGGCTTCCCTTCCCTGCCATTTATTTGACCTCACTGCCATTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAAATGGCTTCCCTTCCCTGCCATTTATTTGACCTCACTGCCATTC  250

seq1  AAAATGAAGAAGAGGTCAACTCATTCTTTGAACATTTGCCTGCATATACC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAAGAAGAGGTCAACTCATTCTTTGAACATTTGCCTGCATATACC  300

seq1  TTCATTTACAGAGTCATTTGTTAAATGGATTATACACAAAGCTTTAACAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTACAGAGTCATTTGTTAAATGGATTATACACAAAGCTTTAACAT  350

seq1  CTCCAGCAGCCCCCTCTCTTAGGCCTTTTGTTCATTTCCCAGAATGGCCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGCAGCCCCCTCTCTTAGGCCTTTTGTTCATTTCCCAGAATGGCCT  400

seq1  CTGGCCATGGGAAAGAAGCTGAGAGAACCCATTTCAATGCATTGTCTATT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCATGGGAAAGAAGCTGAGAGAACCCATTTCAATGCATTGTCTATT  450

seq1  CTCCTTGATCATGCAACCTTGTTGGCAAAGCATAGGCTTTCAGTTTCCCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTGATCATGCAACCTTGTTGGCAAAGCATAGGCTTTCAGTTTCCCA  500

seq1  GATTTAGAGCCATCCTATCTGGACACCAGATGTTTTATTTGAAAATTGTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAGAGCCATCCTATCTGGACACCAGATGTTTTATTTGAAAATTGTT  550

seq1  CCTAGAATATAAATGAAATGAAAACTAACCAGGTTGTTATAAATTCAAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGAATATAAATGAAATGAAAACTAACCAGGTTGTTATAAATTCAAAT  600

seq1  TAGATAGCTATTTCTTTGAGAAACTCTAGTGAATGAACAAGCAGAGTACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGCTATTTCTTTGAGAAACTCTAGTGAATGAACAAGCAGAGTACT  650

seq1  TTTGCCTAATGAAAACAGGTAACACACTGGCTCATGGCTCTGGGTACTCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTAATGAAAACAGGTAACACACTGGCTCATGGCTCTGGGTACTCC  700

seq1  ATAAATATTAAATACTAACAATAAACTCACCATAGACTTGACCTATAATA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATATTAAATACTAACAATAAACTCACCATAGACTTGACCTATAATA  750

seq1  CCTCTGAATTC  760
      |||||||||||
seq2  CCTCTGAATTC  761

seq1: chr18_14365893_14367049
seq2: B6Ng01-172K18.g_62_1215

seq1  GAATTCAGGAGCTCCGGCCCTGCCGGAGAGGTGGAAGGCAGAGAGTGGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAGCTCCGGCCCTGCCGGAGAGGTGGAAGGCAGAGAGTGGCC  50

seq1  ACAGGACCATGCCAGGGCAGAGATGCGGCCAGTAGAGTGGGAAACACGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGACCATGCCAGGGCAGAGATGCGGCCAGTAGAGTGGGAAACACGTT  100

seq1  GGTCCTTTTTTAATATTTCTGGCAACACTAATATATGCTTTTAAAACATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTTTTTTAATATTTCTGGCAACACTAATATATGCTTTTAAAACATT  150

seq1  TTTTTTAAAAATAAGGCTGCTGAGATGACACAGAGGAGAAAGAAGAGGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAAAATAAGGCTGCTGAGATGACACAGAGGAGAAAGAAGAGGTC  200

seq1  TTTTCAAAGTGTAACCTGCACACACAAAATAAAATTGCTTCATTATTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAAGTGTAACCTGCACACACAAAATAAAATTGCTTCATTATTATA  250

seq1  AGATATAAAAATAAGCTAAAGATACAAGTGAAAGTTTTGAAACTATAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATAAAAATAAGCTAAAGATACAAGTGAAAGTTTTGAAACTATAAAA  300

seq1  ATTCTAGTGTGCATTGGAAGAAAGTTTCTCCTCCCAATGATTTCTTAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAGTGTGCATTGGAAGAAAGTTTCTCCTCCCAATGATTTCTTAGAC  350

seq1  ATAACACCAAAATCACAGACAAAAATAAACAAAAAACAAAACAAATAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACACCAAAATCACAGACAAAAATAAACAAAAAACAAAACAAATAAAA  400

seq1  AGCTCAGCAAAAACAGACAGACTATTTTAAATGTCAAAACCTTGATCTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAGCAAAAACAGACAGACTATTTTAAATGTCAAAACCTTGATCTAG  450

seq1  CAAAGGAATGGCCAACAGCCTGGGAAGGCAATCTATGTTATCCAAGCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGAATGGCCAACAGCCTGGGAAGGCAATCTATGTTATCCAAGCAAA  500

seq1  TATCTGGAAACTATACATCCCATGAAAGCACAGCATCTAGAGAGAATCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGGAAACTATACATCCCATGAAAGCACAGCATCTAGAGAGAATCCC  550

seq1  TGTAACTCTTCGGCAATTAAACAAGTGACCCAGTAAAAAAAGGGGGCAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACTCTTCGGCAATTAAACAAGTGACCCAGTAAAAAAAGGGGGCAAG  600

seq1  GAATACAGACAGATATTTCTCAGTAACACAGGCTTGTCTGTCACTCCAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACAGACAGATATTTCTCAGTAACACAGGCTTGTCTGTCACTCCAAG  650

seq1  TATAAGGGAAGCTGAGTCAGGAAGGTTCAAGGTTCAAGGCCACGGCTAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGGGAAGCTGAGTCAGGAAGGTTCAAGGTTCAAGGCCACGGCTAGG  700

seq1  AGCTATGGTTCAATGGCAGAGGTTTGATCAGCATAAAATTTAAAGGCAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATGGTTCAATGGCAGAGGTTTGATCAGCATAAAATTTAAAGGCAAG  750

seq1  ATTGGACAACATCAGTTCAAGGCCAGCCTGGGCAAACTCTGTCTCAAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGACAACATCAGTTCAAGGCCAGCCTGGGCAAACTCTGTCTCAAGTA  800

seq1  AAAGTCTAAGAAGGACTGGGAATCTAGCTCAGTGGTAGTACAGTATCTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTAAGAAGGACTGGGAATCTAGCTCAGTGGTAGTACAGTATCTGT  850

seq1  CAAGTCTGTGAGAGGGCCTCAGTTCAGCCTTCAATACCAAAAACAAAATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCTGTGAGAGGGCCTCAGTTCAGCCTTCAATACCAAAAACAAAATA  900

seq1  AAGTATCATCAAAGGAAACAAAACCCCAGATACACAAGAGACAGCAAATG  950
      ||||||||||||||||||| ||||||||||||||| ||||||||||||||
seq2  AAGTATCATCAAAGGAAAC-AAACCCCAGATACAC-AGAGACAGCAAATG  948

seq1  TCAGCAGGGCCCAGAGAAAATGGAGTTCTGTGCACTGCTAGGGTGGGTGT  1000
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TCAGCAGGGCCCAGAG-AAATGGAGTTCTGTGCACTGCTAGGGTGGGTGT  997

seq1  AATTACCGCAGCTATTACTAGAAAGCAGTACTGAGGGTCGTCAAAGACT-  1049
       ||||||||||||||||||||||||||||||||| ||||||||| |||| 
seq2  -ATTACCGCAGCTATTACTAGAAAGCAGTACTGA-GGTCGTCAAGGACTT  1045

seq1  -AAAGAGGATTCAAGGTGGTCCAGCATCCTTCTCAG--AGAC-GTCCTTA  1095
       || |||||||||| |||   ||||   ||||||||  |||| |||||||
seq2  AAAGGAGGATTCAA-GTG--TCAGCCATCTTCTCAGGAAGACGGTCCTTA  1092

seq1  GACCTCA-GTCCACTGCAGGGTTTTCAGCTTATAGAAACCAC-ATAAATG  1143
      ||||||| ||||||||||||||||||||| ||||| ||| || |||||||
seq2  GACCTCAGGTCCACTGCAGGGTTTTCAGC-TATAGGAACTACAATAAATG  1141

seq1  TCCACTGACCAGTC  1157
      | |||||| |||||
seq2  TTCACTGA-CAGTC  1154