BAC Information

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BAC

Clone NameB6Ng01-174K24
Chromosome18 (Build37)
Map Location 72,863,540 - 72,864,653
singlet/doubletsinglet
Overlap genenone
Upstream geneDcc, LOC629684
Downstream geneLOC100043411, LOC100042955, Rkhd2, Smad4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174K24.bB6Ng01-174K24.g
ACCGA002697GA002698
length1,152826
definitionB6Ng01-174K24.b B6Ng01-174K24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtaggtaaataaatggataaaaagaacatgtgatgagcagggg
ttcatggcaggagttggggagagagatgtgaaggaaagacatgatgaaga
tacactgtataatgtataaaaatttcaagaataaataaaatgaaaaatca
atatactcaagacaaagtcaaaaagaaacaatgtacttggaggatgatgt
acatgcatgaaggtcattttgaaattttatgatttattcagaatcattac
tagctcggtaaaaattcatctcaaattgagaagtttccaaatatatatca
tcattgtaggtattggaatcatgagaaaacggtgtgctcatgtgcagttg
gaaaaaaaaatgtgaagaaatcttatgtcccctgtaccttgtcagttcta
atggtaatatatttaaaagcagcccatttcagaaagttgggtgttcacat
agatacaggagacacacagaactctttgaagaaaagatccccatcttgct
ttttcttagtctcatccattcctcttcctcccctctgttactcacttgtc
tttatcctgtcctttgttctgtcagccagtggtctactgttcatttcaat
aacctgggcctttcattaaattcccacacatagaagtatacttttctttt
aatttttttcatttttattagatattttctttatttacatttcaaatgcc
atcccctttcctggttccccctcctaaaattccttataccattccccctc
ctcctttttaccaacccacgcaatcccgcttccctgtcctgacattcccc
tatggtggacatagagccttcacaggaccaagggcttctactcccattaa
tgatcaacaaggccatcctctgctaacatatgtgggctggagccatgggg
tccctccatgtgtactctttggttggtgggtttaggtccctggggagctt
taaggggatactgggttaagttcaatattgttggtttcctcctaatgggg
ctgtaaaaaccccttcagcttccttgggttccttttctctctagtttctt
ccatttgtgggacccctgtggcttcaggcccaacaagttgaactgaagct
acaatcaacctatgtatttttgtcagcgaactggctagaaatccctcaca
gg

gaattctaggaaatcttcaatttctttatttctgtctctacccattttcc
atcgagtagagcattgtttgatttctatgaggctgtaaggttttctgttg
ttgttgttgacagccagctttaatgctttgataggattcaggtgattatt
ttgattatttgaatctgttgagatttatgttctgtctgagtatttatatt
gtaaaatattctactctgttcctcatagaaatttttccaagactaatcaa
atgtatatttttttatgtttgataaaatattatataaatgtctgtttagt
ccatttggtttctaatgtctattagctccaatatttctctgtttagtttt
tgatctggatgacctgtccattggtgagagttgagcattgtagtctctca
ctataagcgtattaggataagtatctaatttaagctgtagtagtgactct
tttccaaattgggtgtcttgtgtttggattatagatgttaagaattagaa
tatcatctttgtggaattttcctttagaaatatgtagtgtccttctataa
tgctcagttttggtatgaagtctacgttattacatattaaaatggctaca
ccagcttatttcttaagttcattttcttcgactatctcttctcaaccctt
taccctgatccttgatgcagcagagagatgaatactctttcacatccatt
cagttaatttgtgtctttttattgggaaattcagaccattgatgatgaga
catcaatgaccaatgattgttgattcctattattttgttgtgattttatt
gttggtggtgctgggtagtggaggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_72863540_72864653
seq2: B6Ng01-174K24.b_42_1193

seq1  GAATTCAGTAGGTAAATAAATGGATAAAAAGAACATGTGATGAGCAGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAGGTAAATAAATGGATAAAAAGAACATGTGATGAGCAGGGG  50

seq1  TTCATGGCAGGAGTTGGGGAGAGAGATGTGAAGGAAAGACATGATGAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGGCAGGAGTTGGGGAGAGAGATGTGAAGGAAAGACATGATGAAGA  100

seq1  TACACTGTATAATGTATAAAAATTTCAAGAATAAATAAAATGAAAAATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTGTATAATGTATAAAAATTTCAAGAATAAATAAAATGAAAAATCA  150

seq1  ATATACTCAAGACAAAGTCAAAAAGAAACAATGTACTTGGAGGATGATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTCAAGACAAAGTCAAAAAGAAACAATGTACTTGGAGGATGATGT  200

seq1  ACATGCATGAAGGTCATTTTGAAATTTTATGATTTATTCAGAATCATTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCATGAAGGTCATTTTGAAATTTTATGATTTATTCAGAATCATTAC  250

seq1  TAGCTCGGTAAAAATTCATCTCAAATTGAGAAGTTTCCAAATATATATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCGGTAAAAATTCATCTCAAATTGAGAAGTTTCCAAATATATATCA  300

seq1  TCATTGTAGGTATTGGAATCATGAGAAAACGGTGTGCTCATGTGCAGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTAGGTATTGGAATCATGAGAAAACGGTGTGCTCATGTGCAGTTG  350

seq1  GAAAAAAAAATGTGAAGAAATCTTATGTCCCCTGTACCTTGTCAGTTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAAATGTGAAGAAATCTTATGTCCCCTGTACCTTGTCAGTTCTA  400

seq1  ATGGTAATATATTTAAAAGCAGCCCATTTCAGAAAGTTGGGTGTTCACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAATATATTTAAAAGCAGCCCATTTCAGAAAGTTGGGTGTTCACAT  450

seq1  AGATACAGGAGACACACAGAACTCTTTGAAGAAAAGATCCCCATCTTGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACAGGAGACACACAGAACTCTTTGAAGAAAAGATCCCCATCTTGCT  500

seq1  TTTTCTTAGTCTCATCCATTCCTCTTCCTCCCCTCTGTTACTCACTTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTAGTCTCATCCATTCCTCTTCCTCCCCTCTGTTACTCACTTGTC  550

seq1  TTTATCCTGTCCTTTGTTCTGTCAGCCAGTGGTCTACTGTTCATTTCAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCCTGTCCTTTGTTCTGTCAGCCAGTGGTCTACTGTTCATTTCAAT  600

seq1  AACCTGGGCCTTTCATTAAATTCCCACACATAGAAGTATACTTTTCTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGGGCCTTTCATTAAATTCCCACACATAGAAGTATACTTTTCTTTT  650

seq1  AATTTTTTTCATTTTTATTAGATATTTTCTTTATTTACATTTCAAATGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTTCATTTTTATTAGATATTTTCTTTATTTACATTTCAAATGCC  700

seq1  ATCCCCTTTCCTGGTTCCCCCTCCTAAAATTCCTTATACCATTCCCCCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCTTTCCTGGTTCCCCCTCCTAAAATTCCTTATACCATTCCCCCTC  750

seq1  CTCCTTTTTACCAACCCACGCAATCCCGCTTCCCTGTCCTGACATTCCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTTTACCAACCCACGCAATCCCGCTTCCCTGTCCTGACATTCCCC  800

seq1  TATGGTGGACATAGAGCCTTCACAGGACCAAGGGCTTCTACTCCCATTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTGGACATAGAGCCTTCACAGGACCAAGGGCTTCTACTCCCATTAA  850

seq1  TGATCAACAAGGCCATCCTCTGCT-ACATATGT-GGCTGGAGCCAT-GGG  897
      |||||||||||||||||||||||| |||||||| |||||||||||| |||
seq2  TGATCAACAAGGCCATCCTCTGCTAACATATGTGGGCTGGAGCCATGGGG  900

seq1  TCCCTCCATGTGTACTCTTTGGTTGGT-GGTTTA-GTCCCT-GGGAGCTT  944
      ||||||||||||||||||||||||||| |||||| |||||| ||||||||
seq2  TCCCTCCATGTGTACTCTTTGGTTGGTGGGTTTAGGTCCCTGGGGAGCTT  950

seq1  TAAGGGGATACTGG--TTAGTTC-ATATTGTTG--TTCCTCCT-ATGGGG  988
      ||||||||||||||  | ||||| |||||||||  |||||||| ||||||
seq2  TAAGGGGATACTGGGTTAAGTTCAATATTGTTGGTTTCCTCCTAATGGGG  1000

seq1  CTGTAAAA--CCCTTCAGC-TCCTTGGG-TCCTT---TCTCTAGTTTC-T  1030
      ||||||||  ||||||||| |||||||| |||||   ||||||||||| |
seq2  CTGTAAAAACCCCTTCAGCTTCCTTGGGTTCCTTTTCTCTCTAGTTTCTT  1050

seq1  CCA-TTGTGG--ACCCTGTG--CTCAGG-CCAAC-AGTTG-ACTG-AGC-  1070
      ||| ||||||   |||||||   ||||| ||||| ||||| |||| ||| 
seq2  CCATTTGTGGGACCCCTGTGGCTTCAGGCCCAACAAGTTGAACTGAAGCT  1100

seq1  AC-ATCCACCTATGTA--TTTGTCAG-GCACTGGC-AGA---TCCTCACA  1112
      || ||| |||||||||  |||||||| | |||||| |||    |||||||
seq2  ACAATCAACCTATGTATTTTTGTCAGCGAACTGGCTAGAAATCCCTCACA  1150

seq1  GG  1114
      ||
seq2  GG  1152


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