BAC Information

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BAC

Clone NameB6Ng01-175P19
Chromosome18 (Build37)
Map Location 87,532,028 - 87,533,125
singlet/doubletsinglet
Overlap genenone
Upstream geneNeto1, Cbln2, LOC100039872, LOC100039881, LOC665437, LOC435580, LOC546719, LOC383318
Downstream genePpia-ps18_1039.1, LOC329008, LOC100039961, LOC100039972
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-175P19.bB6Ng01-175P19.g
ACCGA003644GA003645
length1,1811,091
definitionB6Ng01-175P19.b B6Ng01-175P19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaatgaaaatgaagacaaaacatatacaaacttatgggacacaat
gtaagctgtgtaagaggaaagttcatagcattaaagaatttctttccaaa
agtaattggagagaagtcaaagtaacaatataaaagcacacataaacgct
ctagaacaaaaagaagcaaacacaccaaaaaggaataaatggcaagaaat
aatcaaactctggacagaaatcaattagacacaaagagaacaatgttaag
aatcaatgaaaccaagagatagttctttgacaaaatcaatattagagata
aactcttagccaaacaaactaaaaggcagagagacaatatccaaattaac
aaaaccagaaatgaaaagaggatgtaacagacactgaaaacccccccaaa
aaaatcttaaaaggcctgtactcgacaaaaatgggaaaatataaatgaaa
tgaacgattttcttgatagatatattccactttcgaaagttaaatcaaac
ccaggtaaataatttaaataattctataacgcctaaggaaatagaaacag
ccataaaaagtcttccaacaaaaacaataaccaagggctagatgatttta
gtggagatttctactggactttcaacgaagtggtaatgcccataccattt
caaactattactcaaaataggagcagagggaacattagagcactcattat
atgaggcctcagtaatttgcatacctaagtcacacaaagacccaacaaag
aaaaaaaaaatttcagatcaactccctttacaaactttcatacaaaaaat
actcaataaaatactcgaaaactaaattaaagaacacatcaaaaaaaatt
acccaccctgatcaagtaggcttcatcccagggataaaggggatttaata
tacaaaaatctatcaacatcattcaccatatagacaaactgaaagaaaag
aaactatatgatcatctcagtagatgcagaaaaaagctttgacaaaatcc
aatgaccttcatgttaaaatttcttggggagattattgatataggccatt
acataagacattaaaagcaatataccaatagcaccatcaaattaacggag
agaaacttcaagtaattctactaaagtcacagacagaacaggctgacgaa
ctctgcaatctcctccatatatttgtataca

gaattctcacttctaaaagagtgtggagttaatttaattgatcactagca
gggtgatctgaagatgaagtggagacatgtgacacataccctctttccaa
gtgctttcccatccaatccaatatacagctgcaactactattgagatcta
gttattgaaagaaaaagaaagtgaaagaaagaacaaaattagcacagaca
atccactgctatgacattcaggcaacagtaaaataaaaagaaacctccag
acatttatatgtgtagctgctggatggacagcatctgcttctgacgcttg
ctcatcacttacagaagtgcaagccaaaattggaaacacaattgatattg
atagtagctggctgctgaagcagaattgtactgcttgtaacaaatgatga
agaaattaagggcactgccctgaaactattacctcatcacccattgctgg
gctatacagagccttaaccgaagagtggctctttggcatccaacattcag
agtgtagcacaaatgacagaatgaaaaccataaatgtgttattgtcagct
taaaaacatgatctatattgtctgcaaaggaaaaatatccagatatactg
tacaaattgaaaggctgcttaaaaactaaaataaattgtaagtataaaaa
tgatagcaatgtatccatttgaatgaggtgattttaaaatgaacactctt
gaagcaaaaaatatccaaggaataggttggtcttttggcaaagatgatta
gcacagggtcaaaggccagatgctgttttggcactgtgaacataagtcgt
ggttggtacagaaaagtaataagcaattcctgaattttttaaaatgggaa
aataaacatgtcaataatatacagtgcccaataatatgtgtattttatat
gaagataaatggactgaaatggcatgtgatgtttgaaggagcaagtgaag
aatgagatcaatatcctttaagagaagtgccccaattgagacaaatctca
tgccaaacaacccttacactattatatattctgttatgcttgtagaacat
gatcttaacctaatgtcctctgattggatccaacccaccag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_87532028_87533125
seq2: B6Ng01-175P19.g_61_1151 (reverse)

seq1  CTGGTGGGTGGGA-CCCATCAGAGGACATTTAGTTTAGGATCATG-TCTA  48
      ||||||||| ||| || ||||||||||| |||| ||| ||||||| ||||
seq2  CTGGTGGGTTGGATCCAATCAGAGGACA-TTAGGTTAAGATCATGTTCTA  49

seq1  CAAGCATAACAGAATATTATTAATAGTGTTAGGGTTGGTTTTGGCATGAG  98
      |||||||||||||||||   ||||||||| |||||||  |||||||||||
seq2  CAAGCATAACAGAATAT--ATAATAGTGTAAGGGTTG--TTTGGCATGAG  95

seq1  ATTTGTCTCAATTTGGGCCACTTCTCCTTAAAGGATATTTGATCTCATTC  148
      ||||||||||| ||||| ||||||| ||||||||||| ||||||||||||
seq2  ATTTGTCTCAA-TTGGGGCACTTCT-CTTAAAGGATA-TTGATCTCATTC  142

seq1  TTCACTTGCTCCTTCAAACATCACATGCCATTTCAGTCCATTTTATCTTC  198
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTCACTTGCTCCTTCAAACATCACATGCCATTTCAGTCCA-TTTATCTTC  191

seq1  ATATAAAATACACATATTATTGGGCACTGTATATTATTGACATGTTTATT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAAATACACATATTATTGGGCACTGTATATTATTGACATGTTTATT  241

seq1  TTCCCATTTTAAAAAATTCAGGAATTGCTTATTACTTTTCTGTACCAACC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCATTTTAAAAAATTCAGGAATTGCTTATTACTTTTCTGTACCAACC  291

seq1  ACGACTTATGTTCACAGTGCCAAAACAGCATCTGGCCTTTGACCCTGTGC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGACTTATGTTCACAGTGCCAAAACAGCATCTGGCCTTTGACCCTGTGC  341

seq1  TAATCATCTTTGCCAAAAGACCAACCTATTCCTTGGATATTTTTTGCTTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCATCTTTGCCAAAAGACCAACCTATTCCTTGGATATTTTTTGCTTC  391

seq1  AAGAGTGTTCATTTTAAAATCACCTCATTCAAATGGATACATTGCTATCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTGTTCATTTTAAAATCACCTCATTCAAATGGATACATTGCTATCA  441

seq1  TTTTTATACTTACAATTTATTTTAGTTTTTAAGCAGCCTTTCAATTTGTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATACTTACAATTTATTTTAGTTTTTAAGCAGCCTTTCAATTTGTA  491

seq1  CAGTATATCTGGATATTTTTCCTTTGCAGACAATATAGATCATGTTTTTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATATCTGGATATTTTTCCTTTGCAGACAATATAGATCATGTTTTTA  541

seq1  AGCTGACAATAACACATTTATGGTTTTCATTCTGTCATTTGTGCTACACT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGACAATAACACATTTATGGTTTTCATTCTGTCATTTGTGCTACACT  591

seq1  CTGAATGTTGGATGCCAAAGAGCCACTCTTCGGTTAAGGCTCTGTATAGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATGTTGGATGCCAAAGAGCCACTCTTCGGTTAAGGCTCTGTATAGC  641

seq1  CCAGCAATGGGTGATGAGGTAATAGTTTCAGGGCAGTGCCCTTAATTTCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAATGGGTGATGAGGTAATAGTTTCAGGGCAGTGCCCTTAATTTCT  691

seq1  TCATCATTTGTTACAAGCAGTACAATTCTGCTTCAGCAGCCAGCTACTAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCATTTGTTACAAGCAGTACAATTCTGCTTCAGCAGCCAGCTACTAT  741

seq1  CAATATCAATTGTGTTTCCAATTTTGGCTTGCACTTCTGTAAGTGATGAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATCAATTGTGTTTCCAATTTTGGCTTGCACTTCTGTAAGTGATGAG  791

seq1  CAAGCGTCAGAAGCAGATGCTGTCCATCCAGCAGCTACACATATAAATGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCGTCAGAAGCAGATGCTGTCCATCCAGCAGCTACACATATAAATGT  841

seq1  CTGGAGGTTTCTTTTTATTTTACTGTTGCCTGAATGTCATAGCAGTGGAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGGTTTCTTTTTATTTTACTGTTGCCTGAATGTCATAGCAGTGGAT  891

seq1  TGTCTGTGCTAATTTTGTTCTTTCTTTCACTTTCTTTTTCTTTCAATAAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTGCTAATTTTGTTCTTTCTTTCACTTTCTTTTTCTTTCAATAAC  941

seq1  TAGATCTCAATAGTAGTTGCAGCTGTATATTGGATTGGATGGGAAAGCAC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCTCAATAGTAGTTGCAGCTGTATATTGGATTGGATGGGAAAGCAC  991

seq1  TTGGAAAGAGGGTATGTGTCACATGTCTCCACTTCATCTTCAGATCACCC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAAGAGGGTATGTGTCACATGTCTCCACTTCATCTTCAGATCACCC  1041

seq1  TGCTAGTGATCAATTAAATTAACTCCACACTCTTTTAGAAGTGAGAATTC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGTGATCAATTAAATTAACTCCACACTCTTTTAGAAGTGAGAATTC  1091


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