BAC Information

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BAC

Clone NameB6Ng01-177I22
Chromosome18 (Build37)
Map Location 75,408,163 - 75,408,947
singlet/doubletsinglet
Overlap geneDym
Upstream geneMbd1, Ccdc11, LOC628298, LOC668124, LOC668126, Myo5b, Acaa2, LOC672799, Lipg, Rpl17, BC031181, LOC628356, EG667777
Downstream geneSmad7, Gm672, Zbtb7c, 4833419G08Rik, LOC668184, Smad2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-177I22.bB6Ng01-177I22.g
ACCGA004791GA004792
length983786
definitionB6Ng01-177I22.b B6Ng01-177I22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgggttttagggaagtgacatgtgactacgttgactgggcttct
gagtgcccagatctgcatcccagcatcaccgtggaccagccacacccatt
ttgcctgaacccagcttctcataggaccataatttggtctgctcattcct
cttcaccaagcctgttcagtgatttttttttttttaaaacaacaccatga
gtgcggccccacccaacaaaccccagaggaggcacggagccaagatggag
ggtaagaaaggaaggggttcatggggtttggcttccctgctaggtcctgt
ctgaccctgccctgcccccttctgcctggctctgcccccaaggggctcct
ggttacccagtgtctgggaggggcagccccatccctcccctccagagctg
agagggcccccccgctgcttccccagcttaacctgtctgaacggccatgc
agttcaaaatggttcggagggcaacttctaattttgtgcaggggggagca
tggctttggaagggggggtttgaattcagggccagggccctgtctggacc
accccctcaaaaccctttgcctccggttagggggtaaacaggaggaagga
acaaaaaccttgggtggggccctggtttaaaggaacccccccaaaaaccc
cttcccggggaaaccctggggaggcttttaacatggtttctaaaataaaa
cccaaagcctttttaaactaatttagagccttctctcacaccccccccca
ataccctttttggggcccctctctcgtgacagagactctatagggtgtga
ctcctcggggccgggtgatatttcctctctctctatagacagaggtgtgg
agagctattagcacacttatacgcctgctgctctgataactactaaaaaa
tgtgtgggccctacaccacggtggagagtgtttaagacacaaatgtagtg
tggcgacacatagacgcggggaggacccttctc
gaattctgtagagcagagccctgttcccagcagataaagtctaaagttac
tctgggattctagatagctcatggcccctaagcctccttgcccggccttc
ttcctccccatcccccttgctccaggcagctctgcatctgtgtccttccc
tggactccctttgtgggtttgctcctacggctctcatctggaggtggcat
cccttttaccttggccagtcacttagtcagatcctgaacatcccctcagg
gccccgctgaatttcaaaggatgcctgaagacttcccttttattcttgta
tggatgtgtgtctctcagtaaaatgcccagagcactgtatccccggcatc
tcgtcctcttctgccctgttttaggtatttaatgtctttcccctccacag
tagctgatctgcagccccagctgcctagttcagtccatgaagtgggtgga
ggggtgagccggctgtgtgtactctgtgtgggaagtggggggccgttccc
atgcaggaggtgagaagtcaaaaattctgtacctttagatgttcttttca
aaatgtattctgccatcttctagagtcttaatacctgtaactgcctcccc
ctgttctccacactgtcctagccacgatggctacagcagaggacaagaaa
aacaagccctgctcccatcgaacaggctgtggagaagactcactctaagt
taaaatgtaaaacaaatggctgtcttagaaagtagtgactagcagagaag
tcaagggcagaagagggtgggcaatgggtggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_75408163_75408947
seq2: B6Ng01-177I22.g_65_850

seq1  GAATTCTGTAGAGCAGAGCCCTGTTCCCAGCAGATAAAGTCTAAAGTTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAGAGCAGAGCCCTGTTCCCAGCAGATAAAGTCTAAAGTTAC  50

seq1  TCTGGGATTCTAGATAGCTCATGGCCCCTAAGCCTCCTTGCCCGGCCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGATTCTAGATAGCTCATGGCCCCTAAGCCTCCTTGCCCGGCCTTC  100

seq1  TTCCTCCCCATCCCCCTTGCTCCAGGCAGCTCTGCATCTGTGTCCTTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCCCATCCCCCTTGCTCCAGGCAGCTCTGCATCTGTGTCCTTCCC  150

seq1  TGGACTCCCTTTGTGGGTTTGCTCCTACGGCTCTCATCTGGAGGTGGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTCCCTTTGTGGGTTTGCTCCTACGGCTCTCATCTGGAGGTGGCAT  200

seq1  CCCTTTTACCTTGGCCAGTCACTTAGTCAGATCCTGAACATCCCCTCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTACCTTGGCCAGTCACTTAGTCAGATCCTGAACATCCCCTCAGG  250

seq1  GCCCCGCTGAATTTCAAAGGATGCCTGAAGACTTCCCTTTTATTCTTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCGCTGAATTTCAAAGGATGCCTGAAGACTTCCCTTTTATTCTTGTA  300

seq1  TGGATGTGTGTCTCTCAGTAAAATGCCCAGAGCACTGTATCCCCGGCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGTGTGTCTCTCAGTAAAATGCCCAGAGCACTGTATCCCCGGCATC  350

seq1  TCGTCCTCTTCTGCCCTGTTTTAGGTATTTAATGTCTTTCCCCTCCACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCCTCTTCTGCCCTGTTTTAGGTATTTAATGTCTTTCCCCTCCACAG  400

seq1  TAGCTGATCTGCAGCCCCAGCTGCCTAGTTCAGTCCATGAAGTGGGTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGATCTGCAGCCCCAGCTGCCTAGTTCAGTCCATGAAGTGGGTGGA  450

seq1  GGGGTGAGCCGGCTGTGTGTACTCTGTGTGGGAAGTGGGGGGCCGTTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGAGCCGGCTGTGTGTACTCTGTGTGGGAAGTGGGGGGCCGTTCCC  500

seq1  ATGCAGGAGGTGAGAAGTCAAAAATTCTGTACCTTTAGATGTTCTTTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGGAGGTGAGAAGTCAAAAATTCTGTACCTTTAGATGTTCTTTTCA  550

seq1  AAATGTATTCTGCCATCTTCTAGAGTCTTAATACCTGTAACTGCCTCCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTATTCTGCCATCTTCTAGAGTCTTAATACCTGTAACTGCCTCCCC  600

seq1  CTGTTCTCCACACTGTCCTAGCCACGATGGCTACAGCAGAGGACAAG-AA  649
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTGTTCTCCACACTGTCCTAGCCACGATGGCTACAGCAGAGGACAAGAAA  650

seq1  AACAAGCCCTGCTCCCATCGAACAGGCTGTGGAGAAGACTCACTCTAAGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGCCCTGCTCCCATCGAACAGGCTGTGGAGAAGACTCACTCTAAGT  700

seq1  TAAAATGTAAAACAAATGGCTGTCTTAGAAAGTAGTGACTAGCAGAGAAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGTAAAACAAATGGCTGTCTTAGAAAGTAGTGACTAGCAGAGAAG  750

seq1  TCAAGGGCAGAAGAGGGTGGGCAATGGGTGGGGGGG  785
      ||||||||||||||||||||||||||||||||||||
seq2  TCAAGGGCAGAAGAGGGTGGGCAATGGGTGGGGGGG  786