MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-182A21
Chromosome	18 (Build37)	4 (Build37)
Map Location	24,763,353 - 24,763,750	141,366,478 - 141,367,251
singlet/doublet	singlet	singlet
Overlap gene	Epl2
Upstream gene	Dtna, Mapre2, EG665813, LOC100040623, Zfp397, C230097I24Rik, Zfp35, Zfp191, D030070L09Rik, Galnt1, LOC665586, 2700062C07Rik, BC021395, Slc39a6
Downstream gene	Mocos, Fhod3, 5730494M16Rik, AW554918, Brunol4, LOC100041241
Link	Open Mouse BAC browser

Click to get alignment info.

name	Dtna (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13527 MGI:106039
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Mapre2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:212307 MGI:106271
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665813 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665813 MGI:3643382
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 831 ESTs, 7 Proteins pseudo : _no_value

name	LOC100040623 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040623
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs

name	Zfp397 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69256 MGI:1916506
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C230097I24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:328918 MGI:2685600
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp35 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22694 MGI:99179
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp191 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:59057 MGI:1929704
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D030070L09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225280 MGI:2443014
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Galnt1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14423 MGI:894693
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665586 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665586
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 22 ESTs, 4 Proteins pseudo : _no_value

name	2700062C07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68046 MGI:1915296
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC021395 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225283 MGI:2385066
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc39a6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:106957 MGI:2147279
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Epl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58523 MGI:1889642
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mocos (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68591 MGI:1915841
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fhod3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225288 MGI:1925847
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	5730494M16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66648 MGI:1913898
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AW554918 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225289 MGI:2147376
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Brunol4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108013 MGI:1932407
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041241 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041241
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 9 ESTs

name	Dtna (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:95113657 GeneID:13527 MGI:106039
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dystrobrevin alpha transcript_id : NM_207650.3

name	Mapre2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353377 GeneID:212307 MGI:106271
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : microtubule-associated protein, RP/EB family, member 2 transcript_id : NM_153058.3

name	LOC100040623 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149269678 GeneID:100040623
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs product : hypothetical protein LOC100040623 transcript_id : XM_001475002.1

name	Zfp397 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113865965 GeneID:69256 MGI:1916506
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 397 transcript_id : NM_027007.2

name	C230097I24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124249106 GeneID:328918 MGI:2685600
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C230097I24 gene transcript_id : NM_001080810.1

name	Zfp35 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83423525 GeneID:22694 MGI:99179
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 35 transcript_id : NM_011755.2

name	Zfp191 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47059077 GeneID:59057 MGI:1929704
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 191 transcript_id : NM_021559.2

name	D030070L09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142364013 GeneID:225280 MGI:2443014
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D030070L09 gene transcript_id : NM_172625.2

name	Galnt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328220 GeneID:14423 MGI:894693
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 transcript_id : NM_013814.2

name	2700062C07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365673 GeneID:68046 MGI:1915296
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2700062C07 gene transcript_id : NM_026529.3

name	BC021395 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68051718 GeneID:225283 MGI:2385066
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC021395 transcript_id : NM_144861.2

name	Slc39a6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130001 GeneID:106957 MGI:2147279
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 39 (metal ion transporter), member 6 transcript_id : NM_139143.2

name	Epl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134032029 GeneID:58523 MGI:1889642
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : elongation protein 2 homolog (S. cerevisiae) transcript_id : NM_021448.2

name	Mocos (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110625678 GeneID:68591 MGI:1915841
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : molybdenum cofactor sulfurase transcript_id : NM_026779.1

name	Fhod3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:37674239 GeneID:225288 MGI:1925847
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : formin homology 2 domain containing 3 transcript_id : NM_175276.3

name	5730494M16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52345391 GeneID:66648 MGI:1913898
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5730494M16 gene transcript_id : NM_001004361.1

name	AW554918 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348178 GeneID:225289 MGI:2147376
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AW554918 transcript_id : NM_001033532.2

name	Brunol4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802187 GeneID:108013 MGI:1932407
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bruno-like 4, RNA binding protein (Drosophila) transcript_id : NM_133195.2

name	LOC100041241 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149269699 GeneID:100041241
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 9 ESTs product : hypothetical protein LOC100041241 transcript_id : XM_001476184.1

name	Dtna (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46519164 GeneID:13527 MGI:106039
definition	GO_component : GO:0016014 - dystrobrevin complex [Evidence NAS]; GO:0005792 - microsome [Evidence IDA]; GO:0042383 - sarcolemma [Evidence TAS]; GO:0045202 - synapse [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; alpha-dystrobrevin product : dystrobrevin alpha isoform 1 protein_id : NP_997533.1

name	Mapre2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543239 CCDS:CCDS29095.1 GeneID:212307 MGI:106271
definition	GO_component : GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0008017 - microtubule binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : T-cell activation protein, EB1 family, member 2; APC-binding protein EB1 product : microtubule-associated protein, RP/EB family, member 2 protein_id : NP_694698.2

name	LOC100040623 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149269679 GeneID:100040623
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475052.1

name	Zfp397 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113865966 CCDS:CCDS29096.1 GeneID:69256 MGI:1916506
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : zinc finger protein 397 protein_id : NP_081283.2

name	C230097I24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124249107 GeneID:328918 MGI:2685600
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : hypothetical protein LOC328918 protein_id : NP_001074279.1

name	Zfp35 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83423526 CCDS:CCDS29097.1 GeneID:22694 MGI:99179
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : zinc finger protein 35 protein_id : NP_035885.2

name	Zfp191 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47059078 CCDS:CCDS29098.1 GeneID:59057 MGI:1929704
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : zinc finger ZF-12 product : zinc finger protein ZF-12 protein_id : NP_067534.2

name	D030070L09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369894 CCDS:CCDS29099.1 GeneID:225280 MGI:2443014
definition	codon_start : 1 product : RIKEN cDNA D030070L09 protein_id : NP_766213.1

name	Galnt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328221 CCDS:CCDS29100.1 GeneID:14423 MGI:894693
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0004653 - polypeptide N-acetylgalactosaminyltransferase activity [Evidence IDA]; GO:0005529 - sugar binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] GO_process : GO:0006493 - protein amino acid O-linked glycosylation [Evidence IDA] codon_start : 1 exception : mismatches in translation note : ppGaNTase-T1 product : UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 protein_id : NP_038842.2

name	2700062C07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386028 CCDS:CCDS29101.1 GeneID:68046 MGI:1915296
definition	codon_start : 1 product : hypothetical protein LOC68046 protein_id : NP_080805.1

name	BC021395 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450083 CCDS:CCDS29102.1 GeneID:225283 MGI:2385066
definition	codon_start : 1 product : cDNA sequence BC021395 protein_id : NP_659110.1

name	Slc39a6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20982835 GeneID:106957 MGI:2147279
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA] GO_function : GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0006829 - zinc ion transport [Evidence IEA] codon_start : 1 note : endoplasmic reticulum membrane protein product : solute carrier family 39 (metal ion transporter), member 6 protein_id : NP_631882.1

name	Epl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134032030 CCDS:CCDS29103.1 GeneID:58523 MGI:1889642
definition	GO_component : GO:0008023 - transcription elongation factor complex [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0019901 - protein kinase binding [Evidence IDA] GO_process : GO:0046425 - regulation of JAK-STAT cascade [Evidence IDA] codon_start : 1 note : Stat3-interacting protein; signal transducer and activator of transcription 3 interacting protein 1 product : signal transducer and activator of transcription interacting protein 1 protein_id : NP_067423.2

name	Mocos (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625679 GeneID:68591 MGI:1915841
definition	GO_function : GO:0016829 - lyase activity [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA]; GO:0006777 - Mo-molybdopterin cofactor biosynthesis [Evidence IEA] codon_start : 1 product : molybdenum cofactor sulfurase protein_id : NP_081055.1

name	Fhod3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37674240 CCDS:CCDS29104.1 GeneID:225288 MGI:1925847
definition	GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005488 - binding [Evidence IEA] GO_process : GO:0030036 - actin cytoskeleton organization and biogenesis [Evidence IEA]; GO:0016043 - cell organization and biogenesis [Evidence IEA] codon_start : 1 product : formin-family protein FHOS2 protein_id : NP_780485.2

name	5730494M16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52345392 CCDS:CCDS29105.1 GeneID:66648 MGI:1913898
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005874 - microtubule [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC66648 protein_id : NP_001004361.1

name	AW554918 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702039 GeneID:225289 MGI:2147376
definition	codon_start : 1 product : hypothetical protein LOC225289 protein_id : NP_001028704.1

name	Brunol4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789315 CCDS:CCDS29106.1 GeneID:108013 MGI:1932407
definition	GO_component : GO:0005634 - nucleus [Evidence ISS]; GO:0030529 - ribonucleoprotein complex [Evidence ISS] GO_function : GO:0042835 - BRE binding [Evidence ISS]; GO:0003729 - mRNA binding [Evidence IDA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0000900 - translation repressor activity, nucleic acid binding [Evidence ISS] GO_process : GO:0009790 - embryonic development [Evidence ISS]; GO:0007281 - germ cell development [Evidence ISS]; GO:0006376 - mRNA splice site selection [Evidence IDA]; GO:0016246 - RNA interference [Evidence ISS] codon_start : 1 exception : mismatches in translation product : bruno-like 4, RNA binding protein protein_id : NP_573458.1

name	LOC100041241 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149269700 GeneID:100041241
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476234.1

name	EG665813 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149269689 GeneID:665813 MGI:3643382
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 831 ESTs, 7 Proteins product : predicted gene, EG665813 pseudo : _no_value transcript_id : XR_001792.2

name	LOC665586 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149269692 GeneID:665586
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 22 ESTs, 4 Proteins product : similar to PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae) pseudo : _no_value transcript_id : XR_032486.1

clone name	MSMg01-506B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480O01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-358J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-202P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159L19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-136H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098K13
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-182A21.b	B6Ng01-182A21.g
ACC	GA008050	GA008051
length	806	775
definition	B6Ng01-182A21.b	B6Ng01-182A21.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(24,763,353 - 24,763,750)	(141,366,478 - 141,367,251)
sequence	gaattccagtacagcctaggctacatagtgagatactgaaagtttttgtt tgtttgtttgtttgtttgttttgtatttacatatgagtgttttgcctgta gctatgtatgtgcactgtttaggccttgtgccctcagaggtcagaagagg aagtcggatcccctggaactggagtaagagatggttgtaaaagccaagcc gggtttcttagttagaggccagcctggtctacaaagtgagttccaggaca gcccgggctacacagagaaaccctgtctcgaaaaacaaaaacaaagagat ggttgtaagtcattatgtgggtgctgggaattgaacccaggtcctcagta agaacaagaagtgttgtttgttcattttaaagcaggatctacctacagag ccctggatatacttgaagaacaagtattcttaactgttgagccatctctc cagaccccacaaaataaatcttaaaaaaataaaataaaaaagaaagccca tcagtcaccaaagagatatatggtatgattctaagtatataaaatatccg caaatggaaatcagcagagacagagaacatacttgtggttgctgcaggct gatgggaagaggcactacgtgcgttagtgactgctggtgggtacagagct gcttttgggggtgatggaaacgttctcagattgattgtggtgaagatcat ataactagtgagctgagctggtttgagggtgtgctcctgtaatctcagca cttaagaggctaaagcaaggggggtggcaaattcaaggccagcctgttgt gcatta	gaattcactatgtagaccaggctggcctcaaactcacaagagatccacct gcctctgcctcccaagtgctgggataaaaggcataaatacagtatttatg tttaattgtgtgtgcacatgagtatagttacccacagtggccagaagagg gtgtcagatctcgcgtcaagctgcccaaagtgtgtacagggaacagaaag ctgcccaacactggtgctggggactgaccagggtcctctacagcagtatg cactttagccactgatggatctctccagaccctggctttgacctttgatc accatgtcttgtcttcctcatgagctgagattacaagtctctgctaacag gcccaaccatctggacttttcgagctaccccaattatttgatggtaccct gaaacagagactccaaactatgccgaataggagggcactgacaaaatggg acacagtagcacaggcagaagcctggatcctacggggaggaaggagagaa atgactccacaaagatgcacacgtgtgaacatacatgctaagttttatgt agtgtgtgtgtggacacatacacacgtcacaggctaacagaatctgtgtc aatgtgtacacctcttaaacccactatttcctatgaaaatagcgcaacgt ggcccaaggccctctacagagagccttgactagtgtgagctgaaggccgt tatcacctaaatggccactgttgggaagtgacccaagaaagcaggaaaac gagtcatataaggacattagccaca
quality values	Open. Hide. 58 33 16 20 58 58 20 14 54 58 39 52 35 58 58 58 58 58 58 49 58 51 52 52 27 62 62 62 62 62 62 62 41 33 28 23 20 24 20 20 27 36 56 50 62 62 62 47 53 62 62 47 47 62 62 62 56 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 44 62 38 49 38 38 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 59 62 62 62 62 62 62 62 59 59 62 62 49 49 62 62 62 59 59 59 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 59 62 62 49 49 62 59 59 49 59 62 59 62 59 62 59 59 62 62 62 62 62 62 59 59 62 62 62 62 49 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 62 59 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 56 62 62 54 62 62 62 62 62 62 54 62 62 62 62 62 56 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 51 62 62 62 47 62 62 62 62 62 62 44 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 54 49 62 51 62 62 56 56 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 47 51 56 37 37 62 62 62 56 62 56 47 42 47 47 56 56 56 62 56 56 51 56 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 39 62 43 62 62 56 62 56 62 62 62 62 62 56 62 62 56 56 56 56 56 56 56 56 43 42 56 56 43 54 54 43 62 54 54 62 43 62 43 56 62 56 62 62 62 56 56 62 62 62 39 47 54 47 52 62 52 52 52 62 52 62 33 62 62 62 62 52 62 52 62 52 62 42 62 54 48 62 62 62 62 62 62 52 54 52 62 62 38 47 13 31 31 33 42 58 23 54 54 35 52 58 42 52 58 58 58 42 58 52 45 42 46 41 41 52 39 32 15 45 37 52 54 58 52 52 45 48 54 58 42 54 34 58 37 26 35 52 45 54 15 25 54 52 30 18 8 26 24 52 54 37 39 52 54 48 42 40 54 39 45 54 52 46 31 47 20 39 58 31 49 35 37 45 53 46 54 41 33 47 33 33 22 12 17 37 31 50 32 34 46 27 31 40 51 45 52 25 37 46 40 32 7 48 25 37 23 54 50 32 53 41 22 50 52 54 26 49 31 25 37 40 39 42 21 28 34 32 40 39 18 50 50 31 53 42 39 35 20 25 32 38 28 26 58 21 35 42 32 58 49 34 53 50 41 39 42 24 41 24 26 23 20 15 35 34 34 29 9 13 26 20 30 37 34 39 49 30 41 33 41 29 39 25 44 18 31 24 11 9 15 46 54 39 37 40 16 30 42 21 32 35 37 53 18 13 18 22 18 21 17 32 12 14 24 19 18 18 11 14 16 23 37 28 14 19 30 36	Open. Hide. 58 38 42 41 62 38 23 54 47 62 62 62 41 62 62 45 47 38 26 56 46 56 62 62 62 62 62 62 54 42 62 62 62 62 44 62 62 62 62 62 47 54 47 47 62 47 51 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 44 62 59 59 62 62 62 62 49 62 59 51 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 49 37 49 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 49 43 62 62 62 62 62 62 49 62 62 62 62 62 62 62 59 59 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 59 62 62 62 62 62 62 46 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 49 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 44 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 62 62 62 62 62 62 54 62 62 62 62 62 51 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 54 62 54 39 62 62 62 62 62 62 47 49 62 46 62 62 62 62 62 62 62 54 50 52 62 62 52 62 62 49 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 46 54 48 62 54 54 52 54 58 58 47 42 39 58 58 54 35 58 54 52 54 35 58 54 35 41 54 45 38 52 52 48 27 52 50 47 38 48 58 35 49 52 36 42 46 52 54 54 58 45 42 58 29 54 41 54 52 54 50 54 58 58 54 54 52 50 54 52 54 45 54 49 58 32 51 50 32 58 39 58 52 58 50 54 53 51 51 50 42 46 41 42 51 46 49 46 52 38 50 18 41 40 46 27 21 9 9 29 51 42 50 50 41 29 48 40 42 50 50 51 52 46 40 33 36 36 35 50 39 50 28 14 42 25 28 28 49 46 36 32 23 50 40 37 46 32 32 40 37 41 51 51 52 47 33 38 51 53 46 50 50 50 33 41 41 39 49 39 42 31 27 49 40 41 39 52 36 50 33 35 19 11 41 17 42 23 44 38 35 31 32 23 35 53 34 41 24 28 22 7 17 26 37 31 27 35 18 24 30 12 30 34 23 35 32 22 23 29 6 44 12 33 30 41 37 43 37 34 22 22 11 27 23 34 20 17 40 31 26 29 10 28 37 54 40 45 34 47 15 21 14 12 18 29 22 14 13 14 6 27 18 29 31 25 25 26 14 9 9 11 6 12 13 11 5 5 13 17 27 21 5 33 11 12 12 14 16 20 20 13 15 18 30 10 16 27 27 14 14

Alignment Information

BAC End 1

BAC End 2

seq1: chr18_24763353_24763750
seq2: B6Ng01-182A21.b_53_536 (reverse)

seq1  --------------------------------------------------  0
                                                        
seq2  TTTCTTTTTTATTTTATTTTTTTAAGATTTATTTTGTGGGGTCTGGAGAG  50

seq1  --------------------------------------------------  0
                                                        
seq2  ATGGCTCAACAGTTAAGAATACTTGTTCTTCAAGTATATCCAGGGCTCTG  100

seq1  --------------------------------------------------  0
                                                        
seq2  TAGGTAGATCCTGCTTTAAAATGAACAAACAACACTTCTTGTTCTTACTG  150

seq1  -------------------------TTTCTTTTTTATTT-----TATTTT  20
                                  | |  | | ||      || | 
seq2  AGGACCTGGGTTCAATTCCCAGCACCCACATAATGACTTACAACCATCTC  200

seq1  TTATTTTTGGTTTTTCAAGACAGGATTTCTCTGTATAGCCCTGGCTGTCC  70
      ||  |||| ||||||| ||||||| ||||||||| |||||| ||||||||
seq2  TTTGTTTTTGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCCGGGCTGTCC  250

seq1  TGGAACTCACCTTGTAGACCAGGCTGGCCTCCAACTCAGAAATCCACCTG  120
      |||||||||| |||||||||||||||||||| |||| ||||| ||     
seq2  TGGAACTCACTTTGTAGACCAGGCTGGCCTCTAACTAAGAAACCC-----  295

seq1  CCTCTGGCTTTCAAGTGCTGGGATTAGAGGCGTGCACCACCACTGCCCGG  170
           |||||                  ||| |  || ||||        
seq2  -----GGCTT------------------GGCTTTTACAACCA--------  314

seq1  CCTCTTCTTTTTTATCAGTTTGCTATAGAT-AGTCTTGATTGTCAAGCAG  219
           ||| ||    ||| || |    |||  | |||  |  ||      
seq2  -----TCTCTTACTCCAG-TTCCAGGGGATCCGACTTCCTCTTC-----T  353

seq1  GAGCACGTCAAGCCA-AAGGCAAACTTTACATTGGCCTTCAGCGATGGTT  268
      || | | | | | || |||||   ||  ||| ||  |       ||   |
seq2  GACCTC-TGAGGGCACAAGGC---CTAAACAGTGCAC-------ATACAT  392

seq1  AACTAAGCTGGCAGAAGCCCCATCTTTGGGCAGAAGTCAGTGGATTTGGT  318
      | |||  | |||| ||  | ||| |                       ||
seq2  AGCTA--CAGGCAAAACACTCATAT-----------------------GT  417

seq1  GAATTTGTCCCCGATAGCTTCCATCATTTTTTTAAAAAACTGTTTTTATT  368
       |||       | | |    | | ||       || ||||       |  
seq2  AAAT------ACAAAACAAACAAACA-------AACAAACAAACAAAAAC  454

seq1  TTTTAGTGTTTCACTTTGTAGCCTAGGCTG  398
      ||| ||| | ||||| ||||||||||||||
seq2  TTTCAGTATCTCACTATGTAGCCTAGGCTG  484

seq1: chr4_141366478_141367251
seq2: B6Ng01-182A21.g_63_837 (reverse)

seq1  TGTGGCTAATGTCCTTCTCTGACTCGTTCTCCTGCTTTCTTGTGTCACTT  50
      |||||||||||||||| | ||||||||| ||||||||||||| |||||||
seq2  TGTGGCTAATGTCCTTATATGACTCGTTTTCCTGCTTTCTTGGGTCACTT  50

seq1  CCCAACAGTGGCCATTTAGGTGATAACGGCCTTCAGCTCACACTAGTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CCCAACAGTGGCCATTTAGGTGATAACGGCCTTCAGCTCACACTAGTCAA  100

seq1  GGCTCTCTGTAGAGGGCCTTGGGCCACGTTGCGCTATTTTCATAGGAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTCTGTAGAGGGCCTTGGGCCACGTTGCGCTATTTTCATAGGAAAT  150

seq1  AGTGGGTTTAAGAGGTGTACACATTGACACAGATTCTGTTAG-CTGTGAC  199
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGTGGGTTTAAGAGGTGTACACATTGACACAGATTCTGTTAGCCTGTGAC  200

seq1  GTGTGTATGTGTCCACACACACACTACATAAAACTTAGCATGTATGTTCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTATGTGTCCACACACACACTACATAAAACTTAGCATGTATGTTCA  250

seq1  CACGTGTGCATCTTTGTGGAGTCATTTCTCTCCTTCCTCCCCGTAGGATC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTGTGCATCTTTGTGGAGTCATTTCTCTCCTTCCTCCCCGTAGGATC  300

seq1  CAGGCTTCTGCCTGTGCTACTGTGTCCCATTTTGTCAGTGCCCTCCTATT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTTCTGCCTGTGCTACTGTGTCCCATTTTGTCAGTGCCCTCCTATT  350

seq1  CGGCATAGTTTGGAGTCTCTGTTTCAGGGTACCATCAAATAATTGGGGTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCATAGTTTGGAGTCTCTGTTTCAGGGTACCATCAAATAATTGGGGTA  400

seq1  GCTCGAAAAGTCCAGATGGTTGGGCCTGTTAGCAGAGACTTGTAATCTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGAAAAGTCCAGATGGTTGGGCCTGTTAGCAGAGACTTGTAATCTCA  450

seq1  GCTCATGAGGAAGACAAGACATGGTGATCAAAGGTCAAAGCCAGGGTCTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATGAGGAAGACAAGACATGGTGATCAAAGGTCAAAGCCAGGGTCTG  500

seq1  GAGAGATCCATCAGTGGCTAAAGTGCATACTGCTGTAGAGGACCCTGGTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATCCATCAGTGGCTAAAGTGCATACTGCTGTAGAGGACCCTGGTC  550

seq1  AGTCCCCAGCACCAGTGTTGGGCAGCTTTCTGTTCCCTGTACACACTTTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCCAGCACCAGTGTTGGGCAGCTTTCTGTTCCCTGTACACACTTTG  600

seq1  GGCAGCTTGACGCGAGATCTGACACCCTCTTCTGGCCACTGTGGGTAACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCTTGACGCGAGATCTGACACCCTCTTCTGGCCACTGTGGGTAACT  650

seq1  ATACTCATGTGCACACACAATTAAACATAAATACTGTATTTATGCCTTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCATGTGCACACACAATTAAACATAAATACTGTATTTATGCCTTTT  700

seq1  ATCCCAGCACTTGGGAGGCAGAGGCAGGTGGATCTCTTGTGAGTTTGAGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAGCACTTGGGAGGCAGAGGCAGGTGGATCTCTTGTGAGTTTGAGG  750

seq1  CCAGCCTGGTCTACATAGTGAATTC  774
      |||||||||||||||||||||||||
seq2  CCAGCCTGGTCTACATAGTGAATTC  775

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BAC

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Alignment Information