BAC Information

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BAC

Clone NameB6Ng01-182H06
Chromosome18 (Build37)
Map Location 52,470,977 - 52,472,121
singlet/doubletsinglet
Overlap genenone
Upstream geneEG240289
Downstream geneFtmt, Srfbp1, Lox, Zfp474, 1700034E13Rik, Gykl1, Sncaip, A730036E13Rik, LOC667317, LOC100042430, Snx2, Gm1859, Snx24
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182H06.bB6Ng01-182H06.g
ACCGA008338GA008339
length1,1451,122
definitionB6Ng01-182H06.b B6Ng01-182H06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccaactaaaagtacttaaaggaaactgggtcttttttgttcta
accattagtagggaaatcaaggaaacaggcttggggcagccggtcacatt
actccaccgtggggaagcagagtgtgccgagtgctcgcgctctgcccaca
ttctctttactgtacaattctgcataacctgatagccataccccaaagtg
catctcccagctgactctagacctcattgagttgacaacggaggttcacc
atctcaagagctctcgttctgcctcagcccttctgatgctggaagatggc
tgatgcctgatgctatcaccttgatgctgaactcccagcctccagcagga
caggtttgtcctgatccctcgttctgggataaccctcatagcaacacaaa
agatcccaaacagcattcgttgaaatggccaacattagaaagttaaggtc
tagtatattttgaggataaatctgaaaattagggattacagaatagaaaa
tctcagagccattaacttaattatgaattattaattctagatttttaaat
tgtgtcaaattaacaaaatcaacccctgcagagggataaggcagagtata
cacatatttttctatagaaactttcagttcagctcatggacaggccagat
gtcagatattaaaatatgaataacattttaaactcactattacatcaaaa
tgacatcaatacctgtgggcatacactagtcttagattctaattagttct
aactagtgaacttccagcaatctttgtgtttggttttatctcaggtaaat
accttatctattacagaaagcaagagaaaacagaaaaccactataacatt
tctttacagcacactcattcttgcttctcttttctgtattgtgctacaaa
tacaataaagcctctctagacagaagccttgagctgtgagtaacgtgtgc
ctgattgacacttaccaaaggcaaatgagtaaaattccactttatgcaga
gaagaaaggggaggaaagtttgtattttaaaatcaactaggcaaagagaa
atttataactttgtagtaaaattatttaatggcactaggacagcttcaaa
aaccacccttcaatatacctatctcgaaatatctcatatttcatt
gaattctttgttcagctctcagccctattttttaaaggggttatttgatt
tttctggagtccaccttcttgagttgaaagatgattctttaataactgac
tgaattgagcatttccttcactgtttttaggtgatacttaagagaacctt
tttttttttttttttttaaagctggaatgatggctaccttgcttgtcatt
tagactacatctagtttcaactaaaacccatgggactcagtacacctatg
agagactttccccccattaattattttatttattcactttacatccctat
tgctgtcctcccccccccatagactcccttgtaagtgcctcccccttctc
ttctcccactctttatatcctctgaaaaagggaggccactcctgggtacc
aacccactctggcacatcaaaacagtgtaggaccaggcatatctcctccc
actgctaaacaaggcagccaactaggggaacaggatacacggggagggaa
aagagtcagggatagcttctgctacagttgttggaggactcacatgaaaa
ccaagctacatatctactacatatgagtgggggaggggctaggtccaacc
catgtatgctctttggttggtggttcagtctctgtgagcccccaagaatc
caggttagctgactctgttggtattcctgtggaattcctatcccctctga
gtccctcaatcgttcccttacctcttccccaagactccagagctctgtcc
agtgtttggctacaggtctctgaacctgtttaagtagcttctgggtggag
cctctcagaggacagctatgctaggctcctctctacaagcataacagaca
attgtgtcaaggactggttcttgcctatgggatggatctcaatttgagcc
agtaattggttggccagtccctcatctctgctcatctttgcccctgcctt
ttctgtaggcaggacagaattttgtgtcaaaggtttctatgactggtccg
tgtacctaatcctctactgggagtctgctgctaaggaggtgacacttcag
ctcctatccccactgctagtagtctcagctaggtcacattccatagactt
ccctgggaagctcctgcatcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_52470977_52472121
seq2: B6Ng01-182H06.b_42_1186

seq1  GAATTCTCCAACTAAAAGTACTTAAAGGAAACTGGGTCTTTTTTGTTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAACTAAAAGTACTTAAAGGAAACTGGGTCTTTTTTGTTCTA  50

seq1  ACCATTAGTAGGGAAATCAAGGAAACAGGCTTGGGGCAGCCGGTCACATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTAGTAGGGAAATCAAGGAAACAGGCTTGGGGCAGCCGGTCACATT  100

seq1  ACTCCACCGTGGGGAAGCAGAGTGTGCCGAGTGCTCGCGCTCTGCCCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCACCGTGGGGAAGCAGAGTGTGCCGAGTGCTCGCGCTCTGCCCACA  150

seq1  TTCTCTTTACTGTACAATTCTGCATAACCTGATAGCCATACCCCAAAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTTACTGTACAATTCTGCATAACCTGATAGCCATACCCCAAAGTG  200

seq1  CATCTCCCAGCTGACTCTAGACCTCATTGAGTTGACAACGGAGGTTCACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCCCAGCTGACTCTAGACCTCATTGAGTTGACAACGGAGGTTCACC  250

seq1  ATCTCAAGAGCTCTCGTTCTGCCTCAGCCCTTCTGATGCTGGAAGATGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAAGAGCTCTCGTTCTGCCTCAGCCCTTCTGATGCTGGAAGATGGC  300

seq1  TGATGCCTGATGCTATCACCTTGATGCTGAACTCCCAGCCTCCAGCAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCCTGATGCTATCACCTTGATGCTGAACTCCCAGCCTCCAGCAGGA  350

seq1  CAGGTTTGTCCTGATCCCTCGTTCTGGGATAACCCTCATAGCAACACAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTTGTCCTGATCCCTCGTTCTGGGATAACCCTCATAGCAACACAAA  400

seq1  AGATCCCAAACAGCATTCGTTGAAATGGCCAACATTAGAAAGTTAAGGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCCAAACAGCATTCGTTGAAATGGCCAACATTAGAAAGTTAAGGTC  450

seq1  TAGTATATTTTGAGGATAAATCTGAAAATTAGGGATTACAGAATAGAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATATTTTGAGGATAAATCTGAAAATTAGGGATTACAGAATAGAAAA  500

seq1  TCTCAGAGCCATTAACTTAATTATGAATTATTAATTCTAGATTTTTAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGAGCCATTAACTTAATTATGAATTATTAATTCTAGATTTTTAAAT  550

seq1  TGTGTCAAATTAACAAAATCAACCCCTGCAGAGGGATAAGGCAGAGTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCAAATTAACAAAATCAACCCCTGCAGAGGGATAAGGCAGAGTATA  600

seq1  CACATATTTTTCTATAGAAACTTTCAGTTCAGCTCATGGACAGGCCAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATATTTTTCTATAGAAACTTTCAGTTCAGCTCATGGACAGGCCAGAT  650

seq1  GTCAGATATTAAAATATGAATAACATTTTAAACTCACTATTACATCAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGATATTAAAATATGAATAACATTTTAAACTCACTATTACATCAAAA  700

seq1  TGACATCAATACCTGTGGGCATACACTAGTCTTAGATTCTAATTAGTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATCAATACCTGTGGGCATACACTAGTCTTAGATTCTAATTAGTTCT  750

seq1  AACTAGTGAACTTCCAGCAATCTTTGTGTTTGGTTTTATCTCAGGTAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGTGAACTTCCAGCAATCTTTGTGTTTGGTTTTATCTCAGGTAAAT  800

seq1  ACCTTATCTATTACAGAAAGCAAGAGAAAACAGAAAACCACTATAACA-T  849
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ACCTTATCTATTACAGAAAGCAAGAGAAAACAGAAAACCACTATAACATT  850

seq1  TCTTTACAGCACACTCATTCTTGCTTCTCTTTTCTGTATTGTGCTACAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACAGCACACTCATTCTTGCTTCTCTTTTCTGTATTGTGCTACAAA  900

seq1  TACAATAAAGCCTCTCTAGACAGAAGCCTTGAGCTGTGAGTAACGTGTGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATAAAGCCTCTCTAGACAGAAGCCTTGAGCTGTGAGTAACGTGTGC  950

seq1  CTGATTGACACTTACCAAAGGCAAATGAGTAAAATTCCACTTTATGCAGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTGACACTTACCAAAGGCAAATGAGTAAAATTCCACTTTATGCAGA  1000

seq1  GAAGAAAGGGGAGGAAAGTTTGTATTTTTAAAAATCAACTAGGCAAAAGA  1049
      ||||||||||||||||||||||||||||  |||||||||||||| |||||
seq2  GAAGAAAGGGGAGGAAAGTTTGTATTTT--AAAATCAACTAGGC-AAAGA  1047

seq1  GAAATTTATAACTTTGTAGTAAAA-TATTTAATGGCAACTAGGAACAGCT  1098
      |||||||||||||||||||||||| ||||||||||| |||||| ||||||
seq2  GAAATTTATAACTTTGTAGTAAAATTATTTAATGGC-ACTAGG-ACAGCT  1095

seq1  TCAAAA--CACCCTTC-ATATA-CTATCTCAAAATATCTCCATATTTCAT  1144
      ||||||  |||||||| ||||| ||||||| |||||||| ||||||||||
seq2  TCAAAAACCACCCTTCAATATACCTATCTCGAAATATCT-CATATTTCAT  1144

seq1  T  1145
      |
seq2  T  1145