BAC Information

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BAC

Clone NameB6Ng01-183P04
Chromosome18 (Build37)
Map Location 57,947,841 - 57,948,831
singlet/doubletsinglet
Overlap genenone
Upstream geneMarch3, C330018D20Rik, Megf10, LOC672445, Prrc1, 1700011I03Rik, 4930511M06Rik, 2210409D07Rik
Downstream geneSlc12a2, 9330166H04Rik, Fbn2, Slc27a6, Isoc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183P04.bB6Ng01-183P04.g
ACCGA009447GA009448
length871985
definitionB6Ng01-183P04.b B6Ng01-183P04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaatgaaatagaattgaagacccagaaatgaacccacacacctat
ggtcacttgatctttgacaagggagctaaaaccatccagtggaaaaaaga
cagcattttcaacaaatggtgctggcacaactggcggttatcatgtagaa
gaatgcgaattgatccttttttttggggttttttttttttttttttttgg
tttttcaagacagggtttctctgtatagccctggctgtcctgtaactcac
tttgtagaccaggctggcctcgaactcagaaatctgcctgcctctgcctc
ccaagtgctgggattaaaggcgcgtgccaccacgcccggcttgaattgat
ccattcttatgtccttgtacaaagctcaagtctaagtgggtcaaggaact
tcatataaaaccagagacactgaaacttatagaggagaaagtggggaaaa
gcctcaagggtatgggcacaggggaaaaattcctaaacagaacagcaatg
gcttgtgctgtaagatcaagaattgacaaatgagacctcataaaattgca
aagcttttgtaaggcaaaagacactgtcaataagacaaaagaccaccaat
agattgggaaaggatttttaccaatcctaaatctgataggggactaatat
ccaatatatacaaagaactcaagaagctggactccagaaaatcaaataac
cctattaaaaaatgggatacagagctaaacaaagaaattctcaactgagg
aacatggaatggctgagaagcacttgaaaaaatgttcaacatcttttaat
catcagggaaatgcaaatcaaaacactctgagattccaccacactcccat
tcagaattgctaagatcaaaa
gaattcagttaagctctcaagtatgctacactacagtgaagaggttttcc
tggagaggcgcctggtgcggccactgaacagcttgcaggagataacttgt
agcattctgcagttgctgtgcaattatctaaactatctcatgcactcatc
gcttcaaatcatcaccaggcaggcaagacaaagcgaaacacacagggaga
agcttttaacagtaatttgtagcaaagatgtttggaataatcgcacattg
cttgttaccactggcttttgtgttaatcacctaattgcaaattggctttc
cttaatgtctggataccatggaaataatcctacaatttctgtgtccctta
tatcctattatttgactttatgcagaacatgcctgcacacacagatttta
aaagaaattctggaggaattaagtacttggggtgggggcagggaaatcag
gcctgtgaatcataaagttgaatcctgtgtccatggctcatagacagcgc
ataatataaaagggggaaaaaagaaaagaaaacatacaaatgggtgtggc
aaacttgctttggaaggcggaagcaagaaggtcaggaatttgagaccagc
atgtgccacataataagaactttgttcagaactaaacaaaagaaaaagca
aacaaaaataacaagaacatgttctgagaaaaataaactttcttcacagg
aacctacaccaaactcactgagatgatattgctacctttgaagacattgg
tccattctgagcctatccctttaaacagtaaaccttcttttgggatgctg
ttgtgagacagagtctttgtagccagtagcctgggatctggcaaccctgc
tgcctctgctcccaagagctgggagagttgttaatccgagattcattgga
gaaataaccatccaaccattttgggccaaatttaagcagtttataaaata
ttaactcctgaccaagagatgtactttgttaggac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_57947841_57948831
seq2: B6Ng01-183P04.g_67_1051 (reverse)

seq1  GTCCTAACCAAAGTACATCTCTTGGTCAGGAGTTAATATTTAATAAAACT  50
      ||||||| ||||||||||||||||||||||||||||||||| || |||||
seq2  GTCCTAA-CAAAGTACATCTCTTGGTCAGGAGTTAATATTTTAT-AAACT  48

seq1  GGCTTTAAATTTGGCCCAAAATGGTGGGATGGTTATTTCTCCAATGAATC  100
      |   ||||||||||||||||||||| ||||||||||||||||||||||||
seq2  G--CTTAAATTTGGCCCAAAATGGTTGGATGGTTATTTCTCCAATGAATC  96

seq1  TCGGGATTAACAAACTCTCCCAGCTCTTGGGAGGCAGAGGCAGCAGGGTT  150
      || |||||||| |||||||||||||||||||| |||||||||||||||||
seq2  TC-GGATTAAC-AACTCTCCCAGCTCTTGGGA-GCAGAGGCAGCAGGGTT  143

seq1  GCCAGATCCCAGGCTACTGGCTACAAAGACTCTGTCTCACAACAGCAT-C  199
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GCCAGATCCCAGGCTACTGGCTACAAAGACTCTGTCTCACAACAGCATCC  193

seq1  CAAAAGAAGGTTTACTGTTTAAAGGGATAGGCTCAGAATGGACCAATGTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGAAGGTTTACTGTTTAAAGGGATAGGCTCAGAATGGACCAATGTC  243

seq1  TTCAAAGGTAGCAATATCATCTCAGTGAGTTTGGTGTAGGTTCCTGTGAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGGTAGCAATATCATCTCAGTGAGTTTGGTGTAGGTTCCTGTGAA  293

seq1  GAAAGTTTATTTTTCTCAGAACATGTTCTTGTTATTTTTGTTTGCTTTTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTTTATTTTTCTCAGAACATGTTCTTGTTATTTTTGTTTGCTTTTT  343

seq1  CTTTTGTTTAGTTCTGAACAAAGTTCTTATTATGTGGCACATGCTGGTCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTTTAGTTCTGAACAAAGTTCTTATTATGTGGCACATGCTGGTCT  393

seq1  CAAATTCCTGACCTTCTTGCTTCCGCCTTCCAAAGCAAGTTTGCCACACC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTCCTGACCTTCTTGCTTCCGCCTTCCAAAGCAAGTTTGCCACACC  443

seq1  CATTTGTATGTTTTCTTTTCTTTTTTCCCCCTTTTATATTATGCGCTGTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTATGTTTTCTTTTCTTTTTTCCCCCTTTTATATTATGCGCTGTC  493

seq1  TATGAGCCATGGACACAGGATTCAACTTTATGATTCACAGGCCTGATTTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGCCATGGACACAGGATTCAACTTTATGATTCACAGGCCTGATTTC  543

seq1  CCTGCCCCCACCCCAAGTACTTAATTCCTCCAGAATTTCTTTTAAAATCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCCCCACCCCAAGTACTTAATTCCTCCAGAATTTCTTTTAAAATCT  593

seq1  GTGTGTGCAGGCATGTTCTGCATAAAGTCAAATAATAGGATATAAGGGAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGCAGGCATGTTCTGCATAAAGTCAAATAATAGGATATAAGGGAC  643

seq1  ACAGAAATTGTAGGATTATTTCCATGGTATCCAGACATTAAGGAAAGCCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAATTGTAGGATTATTTCCATGGTATCCAGACATTAAGGAAAGCCA  693

seq1  ATTTGCAATTAGGTGATTAACACAAAAGCCAGTGGTAACAAGCAATGTGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCAATTAGGTGATTAACACAAAAGCCAGTGGTAACAAGCAATGTGC  743

seq1  GATTATTCCAAACATCTTTGCTACAAATTACTGTTAAAAGCTTCTCCCTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATTCCAAACATCTTTGCTACAAATTACTGTTAAAAGCTTCTCCCTG  793

seq1  TGTGTTTCGCTTTGTCTTGCCTGCCTGGTGATGATTTGAAGCGATGAGTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTCGCTTTGTCTTGCCTGCCTGGTGATGATTTGAAGCGATGAGTG  843

seq1  CATGAGATAGTTTAGATAATTGCACAGCAACTGCAGAATGCTACAAGTTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGATAGTTTAGATAATTGCACAGCAACTGCAGAATGCTACAAGTTA  893

seq1  TCTCCTGCAAGCTGTTCAGTGGCCGCACCAGGCGCCTCTCCAGGAAAACC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTGCAAGCTGTTCAGTGGCCGCACCAGGCGCCTCTCCAGGAAAACC  943

seq1  TCTTCACTGTAGTGTAGCATACTTGAGAGCTTAACTGAATTC  991
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCACTGTAGTGTAGCATACTTGAGAGCTTAACTGAATTC  985