BAC Information

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BAC

Clone NameB6Ng01-185N23
Chromosome18 (Build37)
Map Location 57,884,195 - 58,037,450
singlet/doubletdoublet
Overlap gene1700011I03Rik, Slc12a2, 9330166H04Rik
Upstream geneLmnb1, March3, C330018D20Rik, Megf10, LOC672445, Prrc1, 4930511M06Rik, 2210409D07Rik
Downstream geneFbn2, Slc27a6, Isoc1, Adamts19
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185N23.bB6Ng01-185N23.g
ACCGA010866GA010867
length863987
definitionB6Ng01-185N23.b B6Ng01-185N23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,036,598 - 58,037,450)(57,884,195 - 57,885,172)
sequence
gaattcctcggcttttaacacaaaaaggcactcctcttctggaggcttgt
tttggctgaaaataaaggaacacctgttttccaacttagtatcagctatc
cccctttatcaacctctccaaagacctaagagaaagtgagtgaccacaag
agtttcctctggtcactcactgcctgttatgcccgtgcttactctgtatt
taaaggatacttggaataaacaccatttttaatactttaaagattaaaag
caagattaaagagcctggatttgcagaaatggaaaggtgtggagagaaaa
cacagccagtcacctgtgatcttaatcaccctgcataatttatctgctgt
attgtctgtattttaaagatgaagatggaaaagaaatgatattgggccgg
gcagtggtggcgcacgcctttaatcccagcacttgggaggcagaaacagg
tggatttctgagttcgaggccagcctggtctacagagtgagttccaagac
tgctagagctacacagagaaactgtctggaaaaaaaagcatgtgttcttt
aaaggtgtgtccttttttaaactagggaactgatgtgttagtaacagctc
tgaattgtgcctttcaacctaaagctaatctgtagctgttagaatttcac
cactaatttacctaacaaatgtcaaaacacctgctatgagcccccccaac
tcctcctcacccacccacacccccgcacccccacccccacctcttcctta
ggatatagctaaatcccatctcatggggggtttcctgggaatgggataag
cctaaagaggtacacagccctgtctggtcagaagcaaatgctaagggaca
tggggtgaaggtt
gaattcctgtacttatgaattgatgtttccgtgttctgcatcttctgatc
tacataccactgtatgtcagtgggttcgccctgctcccatcccaggctgt
ccatgacagctttgtacctgtccattatctctatatgtgtgtagcctcag
taacaacacgtcgcagattgtactcattggttacagttcactggtgaata
gaggaagagtctgagggatgccagcttagagaatcattgttaagctttcc
agagctcctgtaatggttacaaaccaatgcagattgtcctcaaaatacct
cccaactcttagactctcagctctccctttaaatgcagttccctttggtg
taatctacttaggtactattggctatttttgtctgattttcttgagatgc
attgctaaaagtgcagggaccatgaggatgagaagggaatgcccaaaggc
acaggtaatggctcggctagcatttggtccttccaggctggcacagaaaa
gtgagcagctcaggccagatgcaagaacacatctgcatcctcattctaaa
ccctgctaaacatgtctgacttctaccacccatatctcgtccattttttc
tcactgccacgaaagaagaaaggatttgtgttgagtcacgatctcagaac
attcagtctgtggttacctaggccatacgcttggatggaacattgtagcc
gtaggagcctttcagggaggagactgttcacttcatgacagtcaagaagt
ggggagcaaaaaaggaattgaggaccggatataggcttgcagagcatgcc
atcaaagccctactttcttccaaatatgtcttatttcctactgcctccag
gaactttggggggttgggggggaacacgaaccagctgagtttcaagcatg
cagtcccaggaagctgttgggaggttattttcacatttaagtgagacctg
ttttttatctttccttgcctgcaatctttaacctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_58036598_58037450
seq2: B6Ng01-185N23.b_47_909 (reverse)

seq1  AACC-TCACCCC-TGTCCCTTAGCATCTGCTTCTGA-CAGACA-GGCTGT  46
      |||| ||||||| ||||||||||||| ||||||||| |||||| ||||||
seq2  AACCTTCACCCCATGTCCCTTAGCATTTGCTTCTGACCAGACAGGGCTGT  50

seq1  GTACCTCTTTA-GCTTAT-CCATTCCCAGGAA--CCCCCATGAGAT-GGA  91
      ||||||||||| |||||| |||||||||||||  |||||||||||| |||
seq2  GTACCTCTTTAGGCTTATCCCATTCCCAGGAAACCCCCCATGAGATGGGA  100

seq1  TTTAGCTATATCCTAAGGAAGGGGTGGGGGTGGGGGTGCGGGGGTGTGGG  141
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTTAGCTATATCCTAAGGAAGAGGTGGGGGTGGGGGTGCGGGGGTGTGGG  150

seq1  TGGGTGAGGAGGAGTTGGGGGGGCTCATAGCAGGTGTTTTGACATTTGTT  191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGAGGAGGAGTTGGGGGGGCTCATAGCAGGTGTTTTGACATTTGTT  200

seq1  AGGTAAATTAGTGGTG-AATTCTAACAGCTACAGATTAGCTTTAGGTTGA  240
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGGTAAATTAGTGGTGAAATTCTAACAGCTACAGATTAGCTTTAGGTTGA  250

seq1  AAGGCACAATTCAGAGCTGTTACTAACACATCAGTTCCCTAGTTTAAAAA  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCACAATTCAGAGCTGTTACTAACACATCAGTTCCCTAGTTTAAAAA  300

seq1  AGGACACACCTTTAAAGAACACATGCTTTTTTTTCCAGACAGTTTCTCTG  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACACACCTTTAAAGAACACATGCTTTTTTTTCCAGACAGTTTCTCTG  350

seq1  TGTAGCTCTAGCAGTCTTGGAACTCACTCTGTAGACCAGGCTGGCCTCGA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCTCTAGCAGTCTTGGAACTCACTCTGTAGACCAGGCTGGCCTCGA  400

seq1  ACTCAGAAATCCACCTGTTTCTGCCTCCCAAGTGCTGGGATTAAAGGCGT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGAAATCCACCTGTTTCTGCCTCCCAAGTGCTGGGATTAAAGGCGT  450

seq1  GCGCCACCACTGCCCGGCCCAATATCATTTCTTTTCCATCTTCATCTTTA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCACCACTGCCCGGCCCAATATCATTTCTTTTCCATCTTCATCTTTA  500

seq1  AAATACAGACAATACAGCAGATAAATTATGCAGGGTGATTAAGATCACAG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAGACAATACAGCAGATAAATTATGCAGGGTGATTAAGATCACAG  550

seq1  GTGACTGGCTGTGTTTTCTCTCCACACCTTTCCATTTCTGCAAATCCAGG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTGGCTGTGTTTTCTCTCCACACCTTTCCATTTCTGCAAATCCAGG  600

seq1  CTCTTTAATCTTGCTTTTAATCTTTAAAGTATTAAAAATGGTGTTTATTC  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTAATCTTGCTTTTAATCTTTAAAGTATTAAAAATGGTGTTTATTC  650

seq1  CAAGTATCCTTTAAATACAGAGTAAGCACGGGCATAACAGGCAGTGAGTG  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTATCCTTTAAATACAGAGTAAGCACGGGCATAACAGGCAGTGAGTG  700

seq1  ACCAGAGGAAACTCTTGTGGTCACTCACTTTCTCTTAGGTCTTTGGAGAG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAGGAAACTCTTGTGGTCACTCACTTTCTCTTAGGTCTTTGGAGAG  750

seq1  GTTGATAAAGGGGGATAGCTGATACTAAGTTGGAAAACAGGTGTTCCTTT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATAAAGGGGGATAGCTGATACTAAGTTGGAAAACAGGTGTTCCTTT  800

seq1  ATTTTCAGCCAAAACAAGCCTCCAGAAGAGGAGTGCCTTTTTGTGTTAAA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAGCCAAAACAAGCCTCCAGAAGAGGAGTGCCTTTTTGTGTTAAA  850

seq1  AGCCGAGGAATTC  853
      |||||||||||||
seq2  AGCCGAGGAATTC  863

seq1: chr18_57884195_57885172
seq2: B6Ng01-185N23.g_68_1054

seq1  GAATTCCTGTACTTATGAATTGATGTTTCCGTGTTCTGCATCTTCTGATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTACTTATGAATTGATGTTTCCGTGTTCTGCATCTTCTGATC  50

seq1  TACATACCACTGTATGTCAGTGGGTTCGCCCTGCTCCCATCCCAGGCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATACCACTGTATGTCAGTGGGTTCGCCCTGCTCCCATCCCAGGCTGT  100

seq1  CCATGACAGCTTTGTACCTGTCCATTATCTCTATATGTGTGTAGCCTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGACAGCTTTGTACCTGTCCATTATCTCTATATGTGTGTAGCCTCAG  150

seq1  TAACAACACGTCGCAGATTGTACTCATTGGTTACAGTTCACTGGTGAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAACACGTCGCAGATTGTACTCATTGGTTACAGTTCACTGGTGAATA  200

seq1  GAGGAAGAGTCTGAGGGATGCCAGCTTAGAGAATCATTGTTAAGCTTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGAGTCTGAGGGATGCCAGCTTAGAGAATCATTGTTAAGCTTTCC  250

seq1  AGAGCTCCTGTAATGGTTACAAACCAATGCAGATTGTCCTCAAAATACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTCCTGTAATGGTTACAAACCAATGCAGATTGTCCTCAAAATACCT  300

seq1  CCCAACTCTTAGACTCTCAGCTCTCCCTTTAAATGCAGTTCCCTTTGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACTCTTAGACTCTCAGCTCTCCCTTTAAATGCAGTTCCCTTTGGTG  350

seq1  TAATCTACTTAGGTACTATTGGCTATTTTTGTCTGATTTTCTTGAGATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTACTTAGGTACTATTGGCTATTTTTGTCTGATTTTCTTGAGATGC  400

seq1  ATTGCTAAAAGTGCAGGGACCATGAGGATGAGAAGGGAATGCCCAAAGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTAAAAGTGCAGGGACCATGAGGATGAGAAGGGAATGCCCAAAGGC  450

seq1  ACAGGTAATGGCTCGGCTAGCATTTGGTCCTTCCAGGCTGGCACAGAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTAATGGCTCGGCTAGCATTTGGTCCTTCCAGGCTGGCACAGAAAA  500

seq1  GTGAGCAGCTCAGGCCAGATGCAAGAACACATCTGCATCCTCATTCTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCAGCTCAGGCCAGATGCAAGAACACATCTGCATCCTCATTCTAAA  550

seq1  CCCTGCTAAACATGTCTGACTTCTACCACCCATATCTCGTCCATTTTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCTAAACATGTCTGACTTCTACCACCCATATCTCGTCCATTTTTTC  600

seq1  TCACTGCCACGAAAGAAGAAAGGATTTGTGTTGAGTCACGATCTCAGAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGCCACGAAAGAAGAAAGGATTTGTGTTGAGTCACGATCTCAGAAC  650

seq1  ATTCAGTCTGTGGTTACCTAGGCCATACGCTTGGATGGAACATTGTAGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTCTGTGGTTACCTAGGCCATACGCTTGGATGGAACATTGTAGCC  700

seq1  GTAGGAGCCTTTCAGGGAGGAGACTGTTCACTTCATGACAGTCAAGAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGAGCCTTTCAGGGAGGAGACTGTTCACTTCATGACAGTCAAGAAGT  750

seq1  GGGGAGCAAAAAAGGAATTGAGGACCGGATATAGGCTTGCAGAGCATGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGCAAAAAAGGAATTGAGGACCGGATATAGGCTTGCAGAGCATGCC  800

seq1  ATCAAAGCCCTAC-TTCTTCCAAATATGTCTTATTTCCTACTGCCTCCAG  849
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATCAAAGCCCTACTTTCTTCCAAATATGTCTTATTTCCTACTGCCTCCAG  850

seq1  GAACTTTGGGGG--TTGGGGGGAACACGAACCAGCTGAG-TTCAAGCATG  896
      ||||||||||||  | ||||||||||||||||||||||| ||||||||||
seq2  GAACTTTGGGGGGTTGGGGGGGAACACGAACCAGCTGAGTTTCAAGCATG  900

seq1  CAGT-CCAGGAAGCTG-TGGGAGGT--ATTTCACATTAAAGTGAGAACCT  942
      |||| ||||||||||| ||||||||   ||||||||| ||||||| ||||
seq2  CAGTCCCAGGAAGCTGTTGGGAGGTTATTTTCACATTTAAGTGAG-ACCT  949

seq1  G-TTTTTATCTTTTCCTTG-CTGCAATCTTTAA-CTCTC  978
      | |||||||| |||||||| ||||||||||||| |||||
seq2  GTTTTTTATC-TTTCCTTGCCTGCAATCTTTAACCTCTC  987