BAC Information

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BAC

Clone NameB6Ng01-187I01
Chromosome18 (Build37)
Map Location 71,920,436 - 71,921,589
singlet/doubletsinglet
Overlap geneDcc
Upstream genenone
Downstream geneLOC629684
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187I01.bB6Ng01-187I01.g
ACCGA012065GA012066
length1,1591,164
definitionB6Ng01-187I01.b B6Ng01-187I01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagttaagtttttctcttagaaatgaggaaggccagtcccccaaa
aagtcaaggaatggccagggtcaaggtttggatcgtttgtatcgtgagtt
cccagacaaagactggtgtgtatttacagtgtattgttatatctcaatgc
cctaattagaaaggtaccaatcgggtaacagattcaggtaaatagacagt
gattgccatgtctacgaagaagacaaacatagaattaataacactcagaa
acaccaagggaaaggtggaagaataacatctttaaattctcaagacagac
agacagacagaccttttacctgtatgttaacctggtcacaagaggcaact
tcagtcacttcccacaagtggcccagtcactgtcacctcaacttgagaag
gaaagtttctacaagttctataggaagcactctccatttgagacagggac
gtgttcctctgtacacacactttatttaattcagttaatctgccctcacc
accttcagctgctgcctgtggggcatgcttgaaaccgagtggtgcttggt
gctgttgtaggtcccaaagatgtacacatgttattgagaatttcactgaa
ggattagccctgcatcacatagctgttgcctcagtaaagttatcaggagg
tttgaagattaacgatcagcgtaatgcattgactatttcggctttgtttt
gttttacactagattcacctgcttgcctttgtaaaatgtgctttatttaa
ttgcaactcaaaacattcataatttttaccatgaaaacaatcatagaatc
ctattttactctagaattctctaagctctcttttggttggttggtttttg
aagtttcaagatatattcttgtttcttcatttcacgtaatcctaataaca
gtattgatcaaaagtaaagaaagagaaaaaaaatcagcattcaactaact
ttgcaattatactttttaaaggattctaataacataatgtaattaaacct
ttttatttggctaaatcaaattataaaaaatcagtatgaagttaaagagg
agtcctaaacatgaaaaaaaacttttgattggtgatatagcctagtggga
gggtgttgcttacacagaagaatcgtgaggtccagtcgggaaccccatat
gtatcaagg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggtccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatgtatggatcacagggctccca
atggaggagctagagaaagtacccaaggagctaagggaacttcaacccta
tagtgaacaacattatgactaacagtacccctgagctctgactctagctg
catatgtatccaaggatgctagtccgtcatcacttgatgaaagtcatgac
acgctgactggtgccggtcatggaaacgtcatctaatgtgcggcaatgga
cttggcacaagacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_71920436_71921589
seq2: B6Ng01-187I01.b_47_1204 (reverse)

seq1  CTTG-TAC--ATGGGTGTCCCGAATTGACCTCA-GATCCTTCTGTGT-AG  45
      |||| |||  |||||  |||||| | ||||||| ||| ||||||||| ||
seq2  CTTGATACATATGGGGTTCCCGACTGGACCTCACGATTCTTCTGTGTAAG  50

seq1  CAACACCCTCCCAACTAAGCTATATCACCAACCAAAAAGTTTTTTTTCAT  95
      |||||||||||| |||| ||||||||||||| | ||||||||||||||||
seq2  CAACACCCTCCC-ACTAGGCTATATCACCAATC-AAAAGTTTTTTTTCAT  98

seq1  GTTTAAGACTCCTTCTTTTACTTCATACTGA-TTTTTATAATTTTGATTT  144
      ||||| |||||| ||||| |||||||||||| ||||||||| ||||||||
seq2  GTTTAGGACTCC-TCTTTAACTTCATACTGATTTTTTATAA-TTTGATTT  146

seq1  AG-CAAATAAAAA-GTTTAATTACATTATGTTATTAGAATCCTTTAAAAA  192
      || |||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AGCCAAATAAAAAGGTTTAATTACATTATGTTATTAGAATCCTTTAAAAA  196

seq1  GTATAATTGCAAAGTTAGTTGAATGCTGATTTTTTTTCTCTTTCTTTACT  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAATTGCAAAGTTAGTTGAATGCTGATTTTTTTTCTCTTTCTTTACT  246

seq1  TTTGATCAATACTGTTATTAGGATTACGTGAAATGAAGAAACAAGAATAT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATCAATACTGTTATTAGGATTACGTGAAATGAAGAAACAAGAATAT  296

seq1  ATCTTGAAACTTCAAAAACCAACCAACCAAAAGAGAGCTTAGAGAATTCT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGAAACTTCAAAAACCAACCAACCAAAAGAGAGCTTAGAGAATTCT  346

seq1  AGAGTAAAATAGGATTCTATGATTGTTTTCATGGTAAAAATTATGAATGT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAAAATAGGATTCTATGATTGTTTTCATGGTAAAAATTATGAATGT  396

seq1  TTTGAGTTGCAATTAAATAAAGCACATTTTACAAAGGCAAGCAGGTGAAT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTTGCAATTAAATAAAGCACATTTTACAAAGGCAAGCAGGTGAAT  446

seq1  CTAGTGTAAAACAAAACAAAGCCGAAATAGTCAATGCATTACGCTGATCG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGTAAAACAAAACAAAGCCGAAATAGTCAATGCATTACGCTGATCG  496

seq1  TTAATCTTCAAACCTCCTGATAACTTTACTGAGGCAACAGCTATGTGATG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCTTCAAACCTCCTGATAACTTTACTGAGGCAACAGCTATGTGATG  546

seq1  CAGGGCTAATCCTTCAGTGAAATTCTCAATAACATGTGTACATCTTTGGG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTAATCCTTCAGTGAAATTCTCAATAACATGTGTACATCTTTGGG  596

seq1  ACCTACAACAGCACCAAGCACCACTCGGTTTCAAGCATGCCCCACAGGCA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACAACAGCACCAAGCACCACTCGGTTTCAAGCATGCCCCACAGGCA  646

seq1  GCAGCTGAAGGTGGTGAGGGCAGATTAACTGAATTAAATAAAGTGTGTGT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTGAAGGTGGTGAGGGCAGATTAACTGAATTAAATAAAGTGTGTGT  696

seq1  ACAGAGGAACACGTCCCTGTCTCAAATGGAGAGTGCTTCCTATAGAACTT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGGAACACGTCCCTGTCTCAAATGGAGAGTGCTTCCTATAGAACTT  746

seq1  GTAGAAACTTTCCTTCTCAAGTTGAGGTGACAGTGACTGGGCCACTTGTG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAACTTTCCTTCTCAAGTTGAGGTGACAGTGACTGGGCCACTTGTG  796

seq1  GGAAGTGACTGAAGTTGCCTCTTGTGACCAGGTTAACATACAGGTAAAAG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTGACTGAAGTTGCCTCTTGTGACCAGGTTAACATACAGGTAAAAG  846

seq1  GTCTGTCTGTCTGTCTGTCTTGAGAATTTAAAGATGTTATTCTTCCACCT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTCTGTCTGTCTGTCTTGAGAATTTAAAGATGTTATTCTTCCACCT  896

seq1  TTCCCTTGGTGTTTCTGAGTGTTATTAATTCTATGTTTGTCTTCTTCGTA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTGGTGTTTCTGAGTGTTATTAATTCTATGTTTGTCTTCTTCGTA  946

seq1  GACATGGCAATCACTGTCTATTTACCTGAATCTGTTACCCGATTGGTACC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGGCAATCACTGTCTATTTACCTGAATCTGTTACCCGATTGGTACC  996

seq1  TTTCTAATTAGGGCATTGAGATATAACAATACACTGTAAATACACACCAG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAATTAGGGCATTGAGATATAACAATACACTGTAAATACACACCAG  1046

seq1  TCTTTGTCTGGGAACTCACGATACAAACGATCCAAACCTTGACCCTGGCC  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTCTGGGAACTCACGATACAAACGATCCAAACCTTGACCCTGGCC  1096

seq1  ATTCCTTGACTTTTTGGGGGACTGGCCTTCCTCATTTCTAAGAGAAAAAC  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTGACTTTTTGGGGGACTGGCCTTCCTCATTTCTAAGAGAAAAAC  1146

seq1  TTAACTGAATTC  1154
      ||||||||||||
seq2  TTAACTGAATTC  1158