BAC Information

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BAC

Clone NameB6Ng01-189I23
Chromosome18 (Build37)
Map Location 56,202,767 - 56,203,772
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043089, LOC667401, LOC667409, LOC629043, LOC100043099, LOC629057
Downstream geneLOC100043104, LOC676543, LOC667432, Gramd3, LOC667458, Aldh7a1, Rnuxa, 1700065I17Rik, LOC675171, Lmnb1, March3, C330018D20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189I23.bB6Ng01-189I23.g
ACCGA013551GA013552
length1,2471,016
definitionB6Ng01-189I23.b B6Ng01-189I23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacaggttagaagaaggagctgagaaaatcaccaaatgtgtaggc
agcctattcaatgaaatcctagcaaaacattcctccaaaatgagagaaac
aggtattcaaacacaggcagcctgtgggaactcagatagacaagaataga
gaagactgtctccatggagtagttatagtcaagatgtcaaacactcaaag
caaagaaacaatatttaaatacataagggaataatgtcaactcacaaagg
aagatacatcagagtacatcatatcactcttctgtaaccctcaaaggtat
ggcattatggaatgatatatttcaatccctggaaataactgacaataggg
aatgttatacccagcaaggatatcttttaaaataaataggtgtcatggtt
tgaatattgttggcccagggagtggcactatttggagctgtaaccttgtt
ggagtaggtgtgtcactgtgggtgtgggcttaacaccttcaccctagctt
tctgaaagtcagtcttccaccaacagccttcagatgaaaatatagaactc
tcagctctgcctgagccatgcctgcctggatgctgccatgtccccacctt
gatgatactggactgaacctctgaatctgtaagccagccccaattaaatg
ttgtcctttataagacttgccttagtcatggtgtctgttcacagcagtaa
aaccctaactaagacaataggtaaataggacatttcaagacacacataag
tgaaggcagttcctgatccccaaaccattactgcagaagatactccagga
atacagaggagaaaaaacaagaaacaaaacccaaaaataaaataataaaa
aaccaaatccaaaccatctcaattatgagactagagaatagactgcaaga
aaggaaaagtttcacaaaggaaagccaggaaggaactaattatgcctaac
acaattaacttgtaaacccctgacactaattggagacagtgtaaagacaa
atagcaatccattgggccagacagagaaaacactacagaatctgtaaata
tctctcagtaacaactttagtataagatacatagatatttgcagactaac
gactgggtgtataacaacagagtcaactattgtttatttcagggacccaa
cacttcactaggcaaaggcactcaacatcagatgacagctcaactttcag
agactcagacacactccaaaccactacaaggtagtgatgtgagcgac
gaattctttttgtgtctaaacattttatttaactctgtctatgaaatgta
aaccctgtcaggcacatagggcttcaaaaaacttttcagtcaaaacctgc
cgccttgacatgttctccaacaactgtagcactttttaggaagacacatg
cattgcaaacacatgagaacaaaggacaagtaaatatcttaggaaatatt
tcatttgcttaaaaaaaaagcaaaaagaaaaaaaaaacaaatgaaaagaa
gaaatctaaaaaggagttagtatttacagcaaattagaattaaatctcag
aatcctaaataggaatgaattgacttattcaactagaaattatagataat
gctctacttaaagtcaccagaaaagctaagctttcgcataaattttcata
aagaacaagtacttctcaaaccagcacaagaaatttcactatattcagta
gacacacacacacacacacacacacgagaaaccaagaactctacatttca
agagcacaatgtcagtagtaaatttcgacctaatgaaaggaaatgttaca
ataatcaagatcatttatcaaaagtctctctgataggttgtttttaaaga
tccataagtattaagatcaaaacacataagggggggggggtgggctatac
tagacaaagtcaaaagaatctggaagcagaccaacaactagaagttaaaa
aatgatcatgattaaagaaataaacataccctatattattgtgtataatt
tctatgaatttatggatctaatgtcatggaaagatcatatatagttactt
ggcagaacctacaataaaatagatcaagcaaaaattgataatcaggtgtt
tactgacagctactagtaaaccaaacagattcgacagaacaaatggtgct
tcttcatagattatgaaaaaaggcacaaataaattttgtatcagattaca
tattttcttcatcaaattataaattttgctacttcaaactgaacaaaaat
cacatgtgtcttcaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_56202767_56203772
seq2: B6Ng01-189I23.g_67_1082

seq1  GAATTCTTTTTGTGTCTAAACATTTTATTTAACTCTGTCTATGAAATGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTGTGTCTAAACATTTTATTTAACTCTGTCTATGAAATGTA  50

seq1  AACCCTGTCAGGCACATAGGGCTTCAAAAAACTTTTCAGTCAAAACCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGTCAGGCACATAGGGCTTCAAAAAACTTTTCAGTCAAAACCTGC  100

seq1  CGCCTTGACATGTTCTCCAACAACTGTAGCACTTTTTAGGAAGACACATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTTGACATGTTCTCCAACAACTGTAGCACTTTTTAGGAAGACACATG  150

seq1  CATTGCAAACACATGAGAACAAAGGACAAGTAAATATCTTAGGAAATATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCAAACACATGAGAACAAAGGACAAGTAAATATCTTAGGAAATATT  200

seq1  TCATTTGCTTAAAAAAAAAGCAAAAAGAAAAAAAAAACAAATGAAAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGCTTAAAAAAAAAGCAAAAAGAAAAAAAAAACAAATGAAAAGAA  250

seq1  GAAATCTAAAAAGGAGTTAGTATTTACAGCAAATTAGAATTAAATCTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCTAAAAAGGAGTTAGTATTTACAGCAAATTAGAATTAAATCTCAG  300

seq1  AATCCTAAATAGGAATGAATTGACTTATTCAACTAGAAATTATAGATAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTAAATAGGAATGAATTGACTTATTCAACTAGAAATTATAGATAAT  350

seq1  GCTCTACTTAAAGTCACCAGAAAAGCTAAGCTTTCGCATAAATTTTCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTACTTAAAGTCACCAGAAAAGCTAAGCTTTCGCATAAATTTTCATA  400

seq1  AAGAACAAGTACTTCTCAAACCAGCACAAGAAATTTCACTATATTCAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAAGTACTTCTCAAACCAGCACAAGAAATTTCACTATATTCAGTA  450

seq1  GACACACACACACACACACACACACGAGAAACCAAGAACTCTACATTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACACACACACACACACACACACGAGAAACCAAGAACTCTACATTTCA  500

seq1  AGAGCACAATGTCAGTAGTAAATTTCGACCTAATGAAAGGAAATGTTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCACAATGTCAGTAGTAAATTTCGACCTAATGAAAGGAAATGTTACA  550

seq1  ATAATCAAGATCATTTATCAAAAGTCTCTCTGATAGGTTGTTTTTAAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCAAGATCATTTATCAAAAGTCTCTCTGATAGGTTGTTTTTAAAGA  600

seq1  TCCATAAGTATTAAGATCAAAACACATAA-GGGGGGGGGGTGGGCTATAC  649
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TCCATAAGTATTAAGATCAAAACACATAAGGGGGGGGGGGTGGGCTATAC  650

seq1  TAGACAAAGTCAAAAGAATCTGGAAGCAGACCAACAACTAGAAGTT-AAA  698
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TAGACAAAGTCAAAAGAATCTGGAAGCAGACCAACAACTAGAAGTTAAAA  700

seq1  AATGATCATGATTAAAGAAATAAACATACCCTATATTATTGTGTATAATT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATCATGATTAAAGAAATAAACATACCCTATATTATTGTGTATAATT  750

seq1  TCTATGAATTTATGGATCTAATGTCATGG-AAGATCATATATAGTTAC-T  796
      ||||||||||||||||||||||||||||| |||||||||||||||||| |
seq2  TCTATGAATTTATGGATCTAATGTCATGGAAAGATCATATATAGTTACTT  800

seq1  GGCAGAA-CTACAAAAAAATAGATCAAGCAAAAA-TGATAGTCAGG-GGT  843
      ||||||| |||||| ||||||||||||||||||| ||||| ||||| | |
seq2  GGCAGAACCTACAATAAAATAGATCAAGCAAAAATTGATAATCAGGTGTT  850

seq1  TACTGACAGCTACTAGTAAACCAAACAGATTCGACAAGACAAAT-GTGCT  892
      ||||||||||||||||||||||||||||||||||||  |||||| |||||
seq2  TACTGACAGCTACTAGTAAACCAAACAGATTCGACAGAACAAATGGTGCT  900

seq1  TC-TCATAGATTATGAAAAAAGGCACAAATAAATTTTGTATCAGATTACA  941
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATAGATTATGAAAAAAGGCACAAATAAATTTTGTATCAGATTACA  950

seq1  TATTTTCTTCATCAAAATTATAAAATTTAGCAAC-TCAAACTGATACAAA  990
      ||||||||||||| ||||||| |||||| || || |||||||||   |||
seq2  TATTTTCTTCATC-AAATTAT-AAATTTTGCTACTTCAAACTGAACAAAA  998

seq1  ATCACA-ATGTC-TCAAT  1006
      ||||||  |||| |||||
seq2  ATCACATGTGTCTTCAAT  1016