BAC Information

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BAC

Clone NameB6Ng01-189L17
Chromosome18 (Build37)
Map Location 41,110,211 - 41,111,358
singlet/doubletsinglet
Overlap genenone
Upstream geneYipf5, Kctd16, EG225416
Downstream geneLOC677182, LOC100041988, LOC100041997, Prelid2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189L17.bB6Ng01-189L17.g
ACCGA013674GA013675
length1,1581,198
definitionB6Ng01-189L17.b B6Ng01-189L17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgttttaaatctataccttattttttgattgggttgtttggtt
tttttagtggttagcttcttgaacagttctttatatattttggaattaag
aggtagtatttactaattcagaggaacacacattttgaagatagtcaagg
gagtatttggaccttgactcctgtcactcacacatgtgtgtcccagttgt
catccatcactgaacataaaaacagcttttctcacatatgtacctatagt
aaagttagaaagtgacctacttcacaaagctccaagaagatgttctccta
gaataacactaagtgccatcaaatgtatataaacaaacagtatacatata
tatgtatatacatacatacatatacacatatacatatatacacatatatg
catatacatatataaatatggtgcttataaatatgtataaatatatgaaa
gtaacataaatgtagtcatcaaataataaggtagacattccccaaataaa
agttttgtgtcaccgaagaaaatctctggtgccaagaaggggttacatct
tgttgagcattggccaagggggccttatgtgactcccagtcatcagagac
aactgttgttttggtgttctgctaaaagaatatagtaatagcatgactcc
tactgacatactgttataccctcactcaacccgatgtgaattaacacaga
gagccactttataacattatgcagtaaaagagagactgtggaacactctg
ttctaaatgtgtgtctaaaccaaaccactcccctcaaagctcaggaaacc
ataagaggaggtggaaagattgtaagaaagagcagtaatgggtgactctt
aagaaaaaaagtctttccagatacaattggattgtttgcacatataaacc
catagatattgtaacaaaattatacatttgaggttctagcacaaaaactt
tgttacaagccctaacaaatgagctatctgcaattgatatatccctggcc
aaggaaaatgaattattctgatgtagttatcattgggatattatcaacta
aatttcaagtttggctccctgccagaagaaaggtgatccacagaaaggtg
atcctatgggcattttgtgccattttaatataattgtcttttgtttgctc
ttattgtg
gaattcaaagaaaaagtaaaactacaggcatttatggctaccacgttcac
cccagagagaatactagaaggaacacttcagagtgaagacagaggtaaaa
ttgtccaagaggctaccaggaaaagaaatgaagcttagacaattgttgtg
caagaaagagtataaaaacactacaaacccaaaagatttacaatataaaa
tacacttttgtaaataattgcttctggtattgatgtcctaaattctttag
tcaaaggaaacaggatatccaactggattaagaaataggatccatcttct
gttttctactagaagtacacctcacctacaaagatagacattaccccagg
atgaaatgatggggaaagtatttcaaataaacgagaccaggaaacaagca
agcatctctagtctagtatctgacaaaaatagacattaagtcagaactaa
ttaaaagagataaagaaactcacttcatccagacacagagggttattcaa
tcagagtacattacaattctacacacacacatgcaacaaatcaaagtgca
tacttctgagcttaaatcaatgcctaactctaacatagactagcaggtga
cttcagttcccaactttaagtcatgtacagacattcagagaaaataatag
atagatcaatattggagttaagtgacatcatcaatgaaaatggacctacc
taacaactactgaatattccatttaaaccatgtccaatatacatttgctt
cagcagcctaaggataatctttctaaaattggctgtgtagcaatccggaa
aatttgaacaagtataggactaatcaaaataactctatatctatcttagc
atgacttaataaagttggaaatcaatgacaaaagaaactccagaatatac
acaattttatggggattaaacaatacattattaaatgatgcacatgggta
cctaagaaaccaagagggaaataaaactgttaaagtcctgtcagtaagaa
agaatgaaagtaaagctcctcagctctgcaatacaatcttagtagggaag
cagttctaacagaagttgttacagctgttcagtgcctgcttacatttaac
ctacacaagtgactccaaggtattgccaatttaatgaatgttccttagat
tctaaatgagaccaaccttaagtctaaactatttgtgcactgtgtgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_41110211_41111358
seq2: B6Ng01-189L17.b_47_1204

seq1  GAATTCTTGTTTTAAATCTATACCTTATTTTTTGATTGGGTTGTTTGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTTTTAAATCTATACCTTATTTTTTGATTGGGTTGTTTGGTT  50

seq1  TTTTTAGTGGTTAGCTTCTTGAACAGTTCTTTATATATTTTGGAATTAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGTGGTTAGCTTCTTGAACAGTTCTTTATATATTTTGGAATTAAG  100

seq1  AGGTAGTATTTACTAATTCAGAGGAACACACATTTTGAAGATAGTCAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGTATTTACTAATTCAGAGGAACACACATTTTGAAGATAGTCAAGG  150

seq1  GAGTATTTGGACCTTGACTCCTGTCACTCACACATGTGTGTCCCAGTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATTTGGACCTTGACTCCTGTCACTCACACATGTGTGTCCCAGTTGT  200

seq1  CATCCATCACTGAACATAAAAACAGCTTTTCTCACATATGTACCTATAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCATCACTGAACATAAAAACAGCTTTTCTCACATATGTACCTATAGT  250

seq1  AAAGTTAGAAAGTGACCTACTTCACAAAGCTCCAAGAAGATGTTCTCCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTAGAAAGTGACCTACTTCACAAAGCTCCAAGAAGATGTTCTCCTA  300

seq1  GAATAACACTAAGTGCCATCAAATGTATATAAACAAACAGTATACATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAACACTAAGTGCCATCAAATGTATATAAACAAACAGTATACATATA  350

seq1  TATGTATATACATACATACATATACACATATACATATATACACATATATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATATACATACATACATATACACATATACATATATACACATATATG  400

seq1  CATATACATATATAAATATGGTGCTTATAAATATGTATAAATATATGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATACATATATAAATATGGTGCTTATAAATATGTATAAATATATGAAA  450

seq1  GTAACATAAATGTAGTCATCAAATAATAAGGTAGACATTCCCCAAATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACATAAATGTAGTCATCAAATAATAAGGTAGACATTCCCCAAATAAA  500

seq1  AGTTTTGTGTCACCGAAGAAAATCTCTGGTGCCAAGAAGGGGTTACATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTGTGTCACCGAAGAAAATCTCTGGTGCCAAGAAGGGGTTACATCT  550

seq1  TGTTGAGCATTGGCCAAGGGGGCCTTATGTGACTCCCAGTCATCAGAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAGCATTGGCCAAGGGGGCCTTATGTGACTCCCAGTCATCAGAGAC  600

seq1  AACTGTTGTTTTGGTGTTCTGCTAAAAGAATATAGTAATAGCATGACTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTTGTTTTGGTGTTCTGCTAAAAGAATATAGTAATAGCATGACTCC  650

seq1  TACTGACATACTGTTATACCCTCACTCAACCCGATGTGAATTAACACAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGACATACTGTTATACCCTCACTCAACCCGATGTGAATTAACACAGA  700

seq1  GAGCCACTTTATAACATTATGCAGTAAAAGAGAGACTGTGGAACACTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCACTTTATAACATTATGCAGTAAAAGAGAGACTGTGGAACACTCTG  750

seq1  TTCTAAATGTGTGTCTAAACCAAACCACTCCCCTCAAAGCTCAGGAAACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAATGTGTGTCTAAACCAAACCACTCCCCTCAAAGCTCAGGAAACC  800

seq1  ATAAGAGGAGGTGGAAAGATTGTAAGAAAGAGCAGTAATGGGTGACTCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAGGAGGTGGAAAGATTGTAAGAAAGAGCAGTAATGGGTGACTCTT  850

seq1  AAGAAAAAAAGTC-TTCCAGATACAATTGGATTG-TTGCACATATAAACC  898
      ||||||||||||| |||||||||||||||||||| |||||||||||||||
seq2  AAGAAAAAAAGTCTTTCCAGATACAATTGGATTGTTTGCACATATAAACC  900

seq1  CATAGATATTGTAACAAAA-TATACATTTGAGGTTCTAGCACAAAAAC-T  946
      ||||||||||||||||||| |||||||||||||||||||||||||||| |
seq2  CATAGATATTGTAACAAAATTATACATTTGAGGTTCTAGCACAAAAACTT  950

seq1  TGTTACAAGCCCTAACAAATGAGCTATCTGCAATTGATATAT-CCTGGCA  995
      |||||||||||||||||||||||||||||||||||||||||| |||||| 
seq2  TGTTACAAGCCCTAACAAATGAGCTATCTGCAATTGATATATCCCTGGCC  1000

seq1  AAGGAAAATGAA-TATTCTGATGTAG-TATCATT-GGATA-TATCAACTA  1041
      |||||||||||| ||||||||||||| ||||||| ||||| |||||||||
seq2  AAGGAAAATGAATTATTCTGATGTAGTTATCATTGGGATATTATCAACTA  1050

seq1  AATTTCAGGGTTGGCTCCCTGCCCAGGAG-AAGGTGACCAACAGAAAGTG  1090
      ||||||| | ||||||||||| |||| || ||||||| | ||||||||  
seq2  AATTTCAAGTTTGGCTCCCTG-CCAGAAGAAAGGTGATCCACAGAAAGGT  1099

seq1  AATCCTAT-GGCATTTTGTGGCATTTTAATATTATTGTCTTTTGTTTGTT  1139
       ||||||| ||||||||||| ||||||||||| ||||||||||||||| |
seq2  GATCCTATGGGCATTTTGTGCCATTTTAATATAATTGTCTTTTGTTTGCT  1149

seq1  TTTATTGTG  1148
       ||||||||
seq2  CTTATTGTG  1158