BAC Information

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BAC

Clone NameB6Ng01-190D23
Chromosome18 (Build37)
Map Location 22,691,049 - 22,835,048
singlet/doubletdoublet
Overlap genenone
Upstream geneKlhl14, 4921528I01Rik, LOC546708, LOC100040547, Asxl3
Downstream geneNol4, LOC100040579, LOC665797, Dtna
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190D23.bB6Ng01-190D23.g
ACCGA014051GA014052
length1,1411,090
definitionB6Ng01-190D23.b B6Ng01-190D23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,833,900 - 22,835,048)(22,691,049 - 22,692,139)
sequence
gaattctgtattttgccttctggtctgaggtccttcgtctgtggcccagg
atgaggcagcaattgaatggcagaggctaaacacctcacgatggatagaa
agcaaagagagtttattcactgtgggcttctcctttccttctacccagtc
tctgccatataggatgtgctcttcatattcgatataggtgttcccaattg
tcagttacctctggaagtgtactgccagacaaatgaggcacaagaggcac
acaggaataccagacacaccagacacacgagacacacagctcagagctat
tggaaaattttactggacccctcctctcctggaagagacaggtcagagag
cacttaggccagaaggcagaggctcagtaagcccctactatctcattcct
taaagaccaatcagtttaaagggaacactgttccacctatcatattgtgc
ctagttgctgatgctctattctgtccctggaaaccatataaaaactcacc
aaacggaccacctggggtcactgcctctccttgggtctgggacaattcaa
gtgcactggaacaataaatttctcttgcattttgtatcgatttcgggctc
catgtggttcactcagggggttccagataagctaaggttcacctgagtct
tctaacaccagacacaccagatacaccagacataccaaatataccagcat
tttactaagctcctaggtgcttcccaagccagtagagtatgaaacggtca
taggtatttgaccctgttccaggacagtcactgtattttcatctgtccct
tctgaggttctcaggaactgtgaaattgtttctgtccgaatattgaagtg
gagggaggaattgataagttgtgagttcagtcaccaggggtcaaatatga
ctttgttttgctttctgaggcttcagtcttctgtgagctgttctagagac
acagttatcaggttacattcttaactgggagagttctccatgccaaactg
tggcttttaaatgtgctgtgtagaagcagttgtgtgcattggggatgcct
tagccttcaaaacaattgtcctagcaagctgggtaagctttctgcttctc
aacaagttcacaccctggtccctcatccatcctgtctcccc

gaattcctactcctcattaataaaggaatgcagggaaatccatgcaggac
caagactctactaagattttgcttaattttttggtgtctggtatccaatt
cttcctgacctaagaaagtggggttacctgagtaatgaggaaacaggaac
ttcttctgaatggacccaacccatgaaacctgcaatgattgtgtgcttcc
aattagacagagtgtcaaatattgcgaacatctgcctatcatttcaaatc
ttaaaataaatgaaaggcctgggatagttccccaagcagctactaagggg
agcccctatggtatttcataccctttcttcctttaaaagactgcttcctg
tgtagactcaacataaatatttgtgtttgctttcagtgctatacattttt
atataaaatatatctcaaagatttctctgtggagaaagggctatgggaaa
tcagttggtaacttgaaaaagaaacattcaacattaaaaataaaaacttt
aaaactttttgaaaaatcttaacattcgagtgctatttgcataatagttc
ttacattattgcatgtctgacaaacaccagggagacagggtggggctgag
agctggctcatttggtaaaactcttgccttggatgtatgaagaactcaga
ttcccagaacatatgcctttaaaaggtcaggcatgggaatgtacccttgg
aatcccagtgctgcagagacagagagagatccctggaagctcactggcca
gcaaatctaacctacttactgacattctgggccactgagatgcccgttct
cctcttcttccaggttctctgcactttccacctagccccatcgcctgtcc
ctctccttcatcatccctcttttttttttattttttctaactttgtggta
aaagaaagatgtttttgtgcaaactttttctttacaaaagctttgcttca
gaagcactgggacttatcaagatcaaggatctgggtttcacaggcaactg
agtaaaactggcagcaaggtgatgaagtgccagggtagagcacatcagtt
cattgttccgggccagtaaatgtcagactgaaaacttaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_22833900_22835048
seq2: B6Ng01-190D23.b_45_1185 (reverse)

seq1  GGGGAGACAGGAATTGGAATGAGGGA-CAGGGTGTGAACCTGGTTGGAGA  49
      ||||||||||||  ||| |||||||| ||||||||||| || ||||   |
seq2  GGGGAGACAGGA--TGG-ATGAGGGACCAGGGTGTGAA-CTTGTTGAGAA  46

seq1  GCAGAAAGCTTACCCAGCTGGCTAGGACAATTGTTTTGAAGGCTAAGGCA  99
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GCAGAAAGCTTACCCAGCTTGCTAGGACAATTGTTTTGAAGGCTAAGGCA  96

seq1  TTCCCCAAATTGCACACCAACTGCTTCTACACAGCACATTTTAAAAGCCA  149
       |||||||  |||||| ||||||||||||||||||||| |||||||||||
seq2  -TCCCCAA--TGCACA-CAACTGCTTCTACACAGCACA-TTTAAAAGCCA  141

seq1  CAGTTTGGCATGGAGAACTCTCCCAGTTAAGAATGTAACCTGATAACTGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTGGCATGGAGAACTCTCCCAGTTAAGAATGTAACCTGATAACTGT  191

seq1  GTCTCTAGAACAGCTCACAGAAGACTGAAGCCTCAGAAAGCAAAACAAAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTAGAACAGCTCACAGAAGACTGAAGCCTCAGAAAGCAAAACAAAG  241

seq1  TCATATTTGACCCCTGGTGACTGAACTCACAACTTATCAATTCCTCCCTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATTTGACCCCTGGTGACTGAACTCACAACTTATCAATTCCTCCCTC  291

seq1  CACTTCAATATTCGGACAGAAACAATTTCACAGTTCCTGAGAACCTCAGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCAATATTCGGACAGAAACAATTTCACAGTTCCTGAGAACCTCAGA  341

seq1  AGGGACAGATGAAAATACAGTGACTGTCCTGGAACAGGGTCAAATACCTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACAGATGAAAATACAGTGACTGTCCTGGAACAGGGTCAAATACCTA  391

seq1  TGACCGTTTCATACTCTACTGGCTTGGGAAGCACCTAGGAGCTTAGTAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCGTTTCATACTCTACTGGCTTGGGAAGCACCTAGGAGCTTAGTAAA  441

seq1  ATGCTGGTATATTTGGTATGTCTGGTGTATCTGGTGTGTCTGGTGTTAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGGTATATTTGGTATGTCTGGTGTATCTGGTGTGTCTGGTGTTAGA  491

seq1  AGACTCAGGTGAACCTTAGCTTATCTGGAACCCCCTGAGTGAACCACATG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCAGGTGAACCTTAGCTTATCTGGAACCCCCTGAGTGAACCACATG  541

seq1  GAGCCCGAAATCGATACAAAATGCAAGAGAAATTTATTGTTCCAGTGCAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCGAAATCGATACAAAATGCAAGAGAAATTTATTGTTCCAGTGCAC  591

seq1  TTGAATTGTCCCAGACCCAAGGAGAGGCAGTGACCCCAGGTGGTCCGTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTGTCCCAGACCCAAGGAGAGGCAGTGACCCCAGGTGGTCCGTTT  641

seq1  GGTGAGTTTTTATATGGTTTCCAGGGACAGAATAGAGCATCAGCAACTAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGTTTTTATATGGTTTCCAGGGACAGAATAGAGCATCAGCAACTAG  691

seq1  GCACAATATGATAGGTGGAACAGTGTTCCCTTTAAACTGATTGGTCTTTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAATATGATAGGTGGAACAGTGTTCCCTTTAAACTGATTGGTCTTTA  741

seq1  AGGAATGAGATAGTAGGGGCTTACTGAGCCTCTGCCTTCTGGCCTAAGTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATGAGATAGTAGGGGCTTACTGAGCCTCTGCCTTCTGGCCTAAGTG  791

seq1  CTCTCTGACCTGTCTCTTCCAGGAGAGGAGGGGTCCAGTAAAATTTTCCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGACCTGTCTCTTCCAGGAGAGGAGGGGTCCAGTAAAATTTTCCA  841

seq1  ATAGCTCTGAGCTGTGTGTCTCGTGTGTCTGGTGTGTCTGGTATTCCTGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTCTGAGCTGTGTGTCTCGTGTGTCTGGTGTGTCTGGTATTCCTGT  891

seq1  GTGCCTCTTGTGCCTCATTTGTCTGGCAGTACACTTCCAGAGGTAACTGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTCTTGTGCCTCATTTGTCTGGCAGTACACTTCCAGAGGTAACTGA  941

seq1  CAATTGGGAACACCTATATCGAATATGAAGAGCACATCCTATATGGCAGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGGGAACACCTATATCGAATATGAAGAGCACATCCTATATGGCAGA  991

seq1  GACTGGGTAGAAGGAAAGGAGAAGCCCACAGTGAATAAACTCTCTTTGCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGGTAGAAGGAAAGGAGAAGCCCACAGTGAATAAACTCTCTTTGCT  1041

seq1  TTCTATCCATCGTGAGGTGTTTAGCCTCTGCCATTCAATTGCTGCCTCAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATCCATCGTGAGGTGTTTAGCCTCTGCCATTCAATTGCTGCCTCAT  1091

seq1  CCTGGGCCACAGACGAAGGACCTCAGACCAGAAGGCAAAATACAGAATTC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGCCACAGACGAAGGACCTCAGACCAGAAGGCAAAATACAGAATTC  1141


seq1: chr18_22691049_22692139
seq2: B6Ng01-190D23.g_64_1153

seq1  GAATTCCTACTCCTCATTAATAAAGGAATGCAGGGAAATCCATGCAGGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTACTCCTCATTAATAAAGGAATGCAGGGAAATCCATGCAGGAC  50

seq1  CAAGACTCTACTAAGATTTTGCTTAATTTTTTGGTGTCTGGTATCCAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACTCTACTAAGATTTTGCTTAATTTTTTGGTGTCTGGTATCCAATT  100

seq1  CTTCCTGACCTAAGAAAGTGGGGTTACCTGAGTAATGAGGAAACAGGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGACCTAAGAAAGTGGGGTTACCTGAGTAATGAGGAAACAGGAAC  150

seq1  TTCTTCTGAATGGACCCAACCCATGAAACCTGCAATGATTGTGTGCTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTGAATGGACCCAACCCATGAAACCTGCAATGATTGTGTGCTTCC  200

seq1  AATTAGACAGAGTGTCAAATATTGCGAACATCTGCCTATCATTTCAAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGACAGAGTGTCAAATATTGCGAACATCTGCCTATCATTTCAAATC  250

seq1  TTAAAATAAATGAAAGGCCTGGGATAGTTCCCCAAGCAGCTACTAAGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATAAATGAAAGGCCTGGGATAGTTCCCCAAGCAGCTACTAAGGGG  300

seq1  AGCCCCTATGGTATTTCATACCCTTTCTTCCTTTAAAAGACTGCTTCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCTATGGTATTTCATACCCTTTCTTCCTTTAAAAGACTGCTTCCTG  350

seq1  TGTAGACTCAACATAAATATTTGTGTTTGCTTTCAGTGCTATACATTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACTCAACATAAATATTTGTGTTTGCTTTCAGTGCTATACATTTTT  400

seq1  ATATAAAATATATCTCAAAGATTTCTCTGTGGAGAAAGGGCTATGGGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAAATATATCTCAAAGATTTCTCTGTGGAGAAAGGGCTATGGGAAA  450

seq1  TCAGTTGGTAACTTGAAAAAGAAACATTCAACATTAAAAATAAAAACTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTGGTAACTTGAAAAAGAAACATTCAACATTAAAAATAAAAACTTT  500

seq1  AAAACTTTTTGAAAAATCTTAACATTCGAGTGCTATTTGCATAATAGTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTTTTGAAAAATCTTAACATTCGAGTGCTATTTGCATAATAGTTC  550

seq1  TTACATTATTGCATGTCTGACAAACACCAGGGAGACAGGGTGGGGCTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTATTGCATGTCTGACAAACACCAGGGAGACAGGGTGGGGCTGAG  600

seq1  AGCTGGCTCATTTGGTAAAACTCTTGCCTTGGATGTATGAAGAACTCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGCTCATTTGGTAAAACTCTTGCCTTGGATGTATGAAGAACTCAGA  650

seq1  TTCCCAGAACATATGCCTTTAAAAGGTCAGGCATGGGAATGTACCCTTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGAACATATGCCTTTAAAAGGTCAGGCATGGGAATGTACCCTTGG  700

seq1  AATCCCAGTGCTGCAGAGACAGAGAGAGATCCCTGGAAGCTCACTGGCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCAGTGCTGCAGAGACAGAGAGAGATCCCTGGAAGCTCACTGGCCA  750

seq1  GCAAATCTAACCTACTTACTGACATTCTGGGCCACTGAGATGCCCGTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATCTAACCTACTTACTGACATTCTGGGCCACTGAGATGCCCGTTCT  800

seq1  CCTCTTCTTCCAGGTTCTCTGCACTTTCCACCTAGCCCCATCGCCTGTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCTTCCAGGTTCTCTGCACTTTCCACCTAGCCCCATCGCCTGTCC  850

seq1  CTCTCCTTCATCATCCCTC-TTTTTTTTTATTTTTTCTAACTTTGTGGTA  899
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTCTCCTTCATCATCCCTCTTTTTTTTTTATTTTTTCTAACTTTGTGGTA  900

seq1  AAAGAAAGATGTTTTTGTGCAAAC-TTTTCTTTACAAAAGCTTTGCTTCA  948
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AAAGAAAGATGTTTTTGTGCAAACTTTTTCTTTACAAAAGCTTTGCTTCA  950

seq1  GAAGCACTGGGACTTATCAAGGATCAAGGATCT-GGTTTCACAGGCAACT  997
      |||||||||||||||||||| |||||||||||| ||||||||||||||||
seq2  GAAGCACTGGGACTTATCAA-GATCAAGGATCTGGGTTTCACAGGCAACT  999

seq1  GAGTAAAACTGGCAGC-AGGTGATGAAGTGGCCAGGGTAGAGCACATCAG  1046
      |||||||||||||||| |||||||||||| ||||||||||||||||||||
seq2  GAGTAAAACTGGCAGCAAGGTGATGAAGT-GCCAGGGTAGAGCACATCAG  1048

seq1  TTCATTGTTCGGGGCCAAGTAAATGGCCAGGACTGAAAACTTACA  1091
      |||||||||| ||||| |||||||| |   |||||||||||||||
seq2  TTCATTGTTCCGGGCC-AGTAAATGTC--AGACTGAAAACTTACA  1090


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