BAC Information

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BAC

Clone NameB6Ng01-190M03
Chromosome18 (Build37)
Map Location 4,307,030 - 4,308,186
singlet/doubletsinglet
Overlap genenone
Upstream geneCrem, EG621440, Cul2, EG621501, Bambi, LOC100039273, LOC435549, EG664867, LOC621666, Lyzl1, LOC383374, LOC664909
Downstream geneMap3k8, Papd1, EG664931, LOC100039354, LOC433157, 9430020K01Rik, LOC268988, Svil, Zfp438
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190M03.bB6Ng01-190M03.g
ACCGA014434GA014435
length1,146786
definitionB6Ng01-190M03.b B6Ng01-190M03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgtgaaggctgggtgttaacattagattttgagactggcaagg
aaggtgtgggaagaagtagttagagcactctgtctttctgtctgtctgtc
tgtccgtctgtagtatatccaaccagatgaacagtggtcactgcaggact
caggaaaattccttctcaagccttgttgacagacttgcatgccacagtga
ttccttgaacacccatgtcaaaggttcttgctctggcctgtggtctctga
taaccagattatttataataggtgttgtctaacatctcctaaaaatgtag
gttttatgtctgaagtgacaagcatttccaaaaggagaaataatcccagg
aagaaaaccatggtcatgagcaggagatacctgttaatggcagcttgtta
gttttaattggcacatgagaattcacaaaagcctgtagaacagtgagtct
cacaaaatatttgtgtgatggagaaagttcaggagcagagttcacagctc
cacaagaaaggttttattatttatgtcctagcagtgctgaggatggatcc
caggcccttgagcacgcaaggcgagtgtgggaccactgggtcacacccag
ccctttttcatccttctgtgttacagtcaaacatgtgtctgcagtgtgcc
atgaccagatgctctgactgcatgatcctgtcccaatagcacagtgaagg
ggctccttgtctgtccaggtagcttgtaccacagtgaaagttgattttct
ttgcttatgttctgtatacccacccacgtgcgtgcgcacgcgcgggcaca
cacacacacacacacacacacacacacacagttatattatttttaagtat
ttttcatcactttaaataaacttgctgtcttcactgattccactaagcaa
aagtcctcatcagcattctctttccatgttgcttggaagaggctttccag
ggctatagactgtcacctgccatcacacaccagtgtgttccatctttagc
actccagtttcccttcttcttgagatgaggtctctgttctgaaaccttta
tttctttttctcactgtacatgtcgaacaggtgtaaggcaatttgaggta
ccaatggtagaatgtgtacatgtaatgaatgtcaaggttgattcag
gaattccattaatgcatttccatatattgaatcaacctttcacctctggg
atgaagcttacttgatcgtggtggatgatggtcttgatgtgttctttgga
tttgatttgcaagaattttattgagtatttttgcatcaatatttataagc
aaatttggttggaagttctctttctttggtgggtctttgtgtggtttggg
tatcagagtaattgtggcttcataaaatcaattaggtagtgttccttctg
tttctattttatggagtagtttgaggatcttctttgaaggtctgctagaa
ttcttcactaaagccatctggccctgtgctttttaaatttaatttaattt
aattaattatttattcatttatttggctaggaggtttttaatgatttctt
ctatttccttagggtatattgttctgttttgatagtttacctgcttttga
ttcaacgtttgtacattgtatctttctaaaaacaaaacaaaagaaaacaa
aacatccatttcatttagattttccagttttgttgagtataggcttttgc
aataggatctaatgattttctgaatttcctcagtttcagtctttatgtct
cccttttcatttctgattttgttaatttggatgctgtctctgtgccctct
ggttagtctggctaagggtttatctattttgttgatttttgcaaagaacc
aacttttggttttgttgattctttgtattgttctctttgtttctatttgg
atgatctactcttcttgggtgtgtttggtttttttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_4307030_4308186
seq2: B6Ng01-190M03.b_45_1190

seq1  GAATTCATGTGAAGGCTGGGTGTTAACATTAGATTTTGAGACTGGCAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTGAAGGCTGGGTGTTAACATTAGATTTTGAGACTGGCAAGG  50

seq1  AAGGTGTGGGAAGAAGTAGTTAGAGCACTCTGTCTTTCTGTCTGTCTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGTGGGAAGAAGTAGTTAGAGCACTCTGTCTTTCTGTCTGTCTGTC  100

seq1  TGTCCGTCTGTAGTATATCCAACCAGATGAACAGTGGTCACTGCAGGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCGTCTGTAGTATATCCAACCAGATGAACAGTGGTCACTGCAGGACT  150

seq1  CAGGAAAATTCCTTCTCAAGCCTTGTTGACAGACTTGCATGCCACAGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAATTCCTTCTCAAGCCTTGTTGACAGACTTGCATGCCACAGTGA  200

seq1  TTCCTTGAACACCCATGTCAAAGGTTCTTGCTCTGGCCTGTGGTCTCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTGAACACCCATGTCAAAGGTTCTTGCTCTGGCCTGTGGTCTCTGA  250

seq1  TAACCAGATTATTTATAATAGGTGTTGTCTAACATCTCCTAAAAATGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAGATTATTTATAATAGGTGTTGTCTAACATCTCCTAAAAATGTAG  300

seq1  GTTTTATGTCTGAAGTGACAAGCATTTCCAAAAGGAGAAATAATCCCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATGTCTGAAGTGACAAGCATTTCCAAAAGGAGAAATAATCCCAGG  350

seq1  AAGAAAACCATGGTCATGAGCAGGAGATACCTGTTAATGGCAGCTTGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAACCATGGTCATGAGCAGGAGATACCTGTTAATGGCAGCTTGTTA  400

seq1  GTTTTAATTGGCACATGAGAATTCACAAAAGCCTGTAGAACAGTGAGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAATTGGCACATGAGAATTCACAAAAGCCTGTAGAACAGTGAGTCT  450

seq1  CACAAAATATTTGTGTGATGGAGAAAGTTCAGGAGCAGAGTTCACAGCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAATATTTGTGTGATGGAGAAAGTTCAGGAGCAGAGTTCACAGCTC  500

seq1  CACAAGAAAGGTTTTATTATTTATGTCCTAGCAGTGCTGAGGATGGATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGAAAGGTTTTATTATTTATGTCCTAGCAGTGCTGAGGATGGATCC  550

seq1  CAGGCCCTTGAGCACGCAAGGCGAGTGTGGGACCACTGGGTCACACCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCCTTGAGCACGCAAGGCGAGTGTGGGACCACTGGGTCACACCCAG  600

seq1  CCCTTTTTCATCCTTCTGTGTTACAGTCAAACATGTGTCTGCAGTGTGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTTCATCCTTCTGTGTTACAGTCAAACATGTGTCTGCAGTGTGCC  650

seq1  ATGACCAGATGCTCTGACTGCATGATCCTGTCCCAATAGCACAGTGAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCAGATGCTCTGACTGCATGATCCTGTCCCAATAGCACAGTGAAGG  700

seq1  GGCTCCTTGTCTGTCCAGGTAGCTTGTACCACAGTGAAAGTTGATTTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCTTGTCTGTCCAGGTAGCTTGTACCACAGTGAAAGTTGATTTTCT  750

seq1  TTGCTTATGTTCTGTATACCCACCCACGTGCGTGCGCACGCGCGGGCACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTATGTTCTGTATACCCACCCACGTGCGTGCGCACGCGCGGGCACA  800

seq1  CACACACACACACACACACACACACACACAGTTATATTATTTTTAAGTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACAGTTATATTATTTTTAAGTAT  850

seq1  TTTTCATCACTTTAAATAAACTTGCTGTCTTCACTGATTCCACTAAGCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATCACTTTAAATAAACTTGCTGTCTTCACTGATTCCACTAAGCAA  900

seq1  AAGTCCTCATCAGCATTCTCTTTCCATGTTGCTTGGAAGAGGCTTTCCAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCTCATCAGCATTCTCTTTCCATGTTGCTTGGAAGAGGCTTTCCAG  950

seq1  GGCTATAGACTGTCACCTGCCATCACACACCAGTGTGGTCCCATCTTTAA  1000
      |||||||||||||||||||||||||||||||||||| || |||||||| |
seq2  GGCTATAGACTGTCACCTGCCATCACACACCAGTGT-GTTCCATCTTT-A  998

seq1  GCACCTCCAGTTTTCCCTTCTTCTTGAGAATGAGGGTCTCTGTTTCTTGA  1050
      ||| |||||| ||||||||||||||||| |||| |||||||| ||||   
seq2  GCA-CTCCAG-TTTCCCTTCTTCTTGAG-ATGA-GGTCTCTG-TTCT--G  1041

seq1  AAACCTTTATTTCTTTTTCTCACTGTACATGTTCGAACATGTGTTAGCAT  1100
      ||||||||||||||||||||||||||||||| ||||||| |||| ||   
seq2  AAACCTTTATTTCTTTTTCTCACTGTACATG-TCGAACAGGTGTAAGGCA  1090

seq1  TTTTGAGGTACCCAT-GTAG-ATGTGTACATGTATATGGATGTTAAAGGT  1148
       ||||||||||| || |||| ||||||||||||| ||| ||| | |||||
seq2  ATTTGAGGTACCAATGGTAGAATGTGTACATGTA-ATGAATG-TCAAGGT  1138

seq1  TGATATCAG  1157
      |||| ||||
seq2  TGAT-TCAG  1146