BAC Information

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BAC

Clone NameB6Ng01-191A07
Chromosome18 (Build37)
Map Location 55,538,623 - 55,709,799
singlet/doubletdoublet
Overlap genenone
Upstream geneEG545257, LOC100042489, Zfp608, LOC100043089
Downstream geneLOC667401, LOC667409, LOC629043, LOC100043099, LOC629057, LOC100043104, LOC676543, LOC667432, Gramd3, LOC667458, Aldh7a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191A07.bB6Ng01-191A07.g
ACCGA014627GA014628
length6171,133
definitionB6Ng01-191A07.b B6Ng01-191A07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(55,709,183 - 55,709,799)(55,538,623 - 55,539,764)
sequence
gaattccacttttcatcctaccttcttgtgtttacatgaactttcttttg
catttcagagaccttatggaaagattcccccgctgaccccggggaggagt
gaggaatttctccatcaagtgcgtattgatgagctgcaaagttcagtgaa
caggaaaattctgctccttttattgtcgatgtgacaggttactttattac
catgcctttcacggcaatttaacagttaccctggtaacggattcggtgag
gtaatgtgatcacaggcattagagcccaggcaggctggccgctctctctc
ccagcagccatctgctggctgatgttccaagggctgggtgcctggagggg
ccctggcagccagggcctgaatggcaataagcaggtgaaataggctggcc
ctatttagctgcactctggtgatttctttctctaattctattgaaataat
aatcaggatttgtttctgattaattaactaaccttttggtaaaaagatta
gataacgaaattgctgcctattcagagataatgagatttttattactctg
tcaaaagaagaagaaaaaaagtacattatgtgtcaccagccagccgctat
atcaacgggggcggggg

gaattccttaagaagcccgcacaattatgaagtatgtagctgtgaggttc
ctgtaatttgaaggtacacatagctgaaattaaaaaaaaaaaagctacag
tagattgcctttagacagacatatggactgtctctaaactttaagaagca
gtgacagctgcctaatttcagtttttcttgcgttataaagtaagtcagaa
ccaagggttgtacattgtaaagtttttacttctttttcctttttaaactc
aactgtaaaagctgtttagaaatctgtataaccatcaaaatattcaatct
cagaaaataggaaaaaaaattgccaagctttttttaattgtcctggctta
acacggcctctctatatttcttgtcgtaaaaactaggtcataaaaggtac
taaaattgcacagactagaagacttctctcggccccattcttttctatag
ccttcaaactaaatgaaaattcacagagtacagattaatgaatatgcatg
agtctccatgcattgacatacatatgatttctcatctacaaagcacgttt
ggaagacttgttatctgaccagaaaagcctgtagtaagttgagataaagg
agactgactccaatcccttcagtctctgcaattgctttatattctaatca
ctgtgctaagcatctgtccccggcaggcagcctgttcaatctagcagata
acgaatgcagcggatggatggatggtggctgggctggcctttccccacgt
gcacgtgaggagccactgttccatttctctgattacatgggcagcgggaa
agcactctcagagctgtaattgcctccgttatgaaacatcttcacctgtt
agccaagctaagttgaatcacagcagaaattattaacagtggctgttttc
aagccagcttaatctgagctgatgctgctgttcatttacacagatgaata
ggtggtgcaggatgagagtctagtggagatgacaccaccaatgaatattt
gctcacagtctgctgtgggggagctggcttgtacacacagacattgtcaa
aagctaaaggctggggattattggagcttggacaggactgctctgtacaa
tttctctgtgctcatgagtcttcctggctaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_55709183_55709799
seq2: B6Ng01-191A07.b_45_661 (reverse)

seq1  CCCCCGCCCCCGTTGATATAGCGGCTGGCTGGTGACACATAATGTACTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCGCCCCCGTTGATATAGCGGCTGGCTGGTGACACATAATGTACTTT  50

seq1  TTTTCTTCTTCTTTTGACAGAGTAATAAAAATCTCATTATCTCTGAATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTCTTCTTTTGACAGAGTAATAAAAATCTCATTATCTCTGAATAG  100

seq1  GCAGCAATTTCGTTATCTAATCTTTTTACCAAAAGGTTAGTTAATTAATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAATTTCGTTATCTAATCTTTTTACCAAAAGGTTAGTTAATTAATC  150

seq1  AGAAACAAATCCTGATTATTATTTCAATAGAATTAGAGAAAGAAATCACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACAAATCCTGATTATTATTTCAATAGAATTAGAGAAAGAAATCACC  200

seq1  AGAGTGCAGCTAAATAGGGCCAGCCTATTTCACCTGCTTATTGCCATTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGCAGCTAAATAGGGCCAGCCTATTTCACCTGCTTATTGCCATTCA  250

seq1  GGCCCTGGCTGCCAGGGCCCCTCCAGGCACCCAGCCCTTGGAACATCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTGGCTGCCAGGGCCCCTCCAGGCACCCAGCCCTTGGAACATCAGC  300

seq1  CAGCAGATGGCTGCTGGGAGAGAGAGCGGCCAGCCTGCCTGGGCTCTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGATGGCTGCTGGGAGAGAGAGCGGCCAGCCTGCCTGGGCTCTAAT  350

seq1  GCCTGTGATCACATTACCTCACCGAATCCGTTACCAGGGTAACTGTTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTGATCACATTACCTCACCGAATCCGTTACCAGGGTAACTGTTAAA  400

seq1  TTGCCGTGAAAGGCATGGTAATAAAGTAACCTGTCACATCGACAATAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCGTGAAAGGCATGGTAATAAAGTAACCTGTCACATCGACAATAAAA  450

seq1  GGAGCAGAATTTTCCTGTTCACTGAACTTTGCAGCTCATCAATACGCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAGAATTTTCCTGTTCACTGAACTTTGCAGCTCATCAATACGCACT  500

seq1  TGATGGAGAAATTCCTCACTCCTCCCCGGGGTCAGCGGGGGAATCTTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGAGAAATTCCTCACTCCTCCCCGGGGTCAGCGGGGGAATCTTTCC  550

seq1  ATAAGGTCTCTGAAATGCAAAAGAAAGTTCATGTAAACACAAGAAGGTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGTCTCTGAAATGCAAAAGAAAGTTCATGTAAACACAAGAAGGTAG  600

seq1  GATGAAAAGTGGAATTC  617
      |||||||||||||||||
seq2  GATGAAAAGTGGAATTC  617


seq1: chr18_55538623_55539764
seq2: B6Ng01-191A07.g_66_1198

seq1  GAATTCCTTAAGAAGCCCGCACAATTATGAAGTATGTAGCTGTGAGGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAAGAAGCCCGCACAATTATGAAGTATGTAGCTGTGAGGTTC  50

seq1  CTGTAATTTGAAGGTACACATAGCTGAAATTAAAAAAAAAAAAGCTACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAATTTGAAGGTACACATAGCTGAAATTAAAAAAAAAAAAGCTACAG  100

seq1  TAGATTGCCTTTAGACAGACATATGGACTGTCTCTAAACTTTAAGAAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTGCCTTTAGACAGACATATGGACTGTCTCTAAACTTTAAGAAGCA  150

seq1  GTGACAGCTGCCTAATTTCAGTTTTTCTTGCGTTATAAAGTAAGTCAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAGCTGCCTAATTTCAGTTTTTCTTGCGTTATAAAGTAAGTCAGAA  200

seq1  CCAAGGGTTGTACATTGTAAAGTTTTTACTTCTTTTTCCTTTTTAAACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGGTTGTACATTGTAAAGTTTTTACTTCTTTTTCCTTTTTAAACTC  250

seq1  AACTGTAAAAGCTGTTTAGAAATCTGTATAACCATCAAAATATTCAATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTAAAAGCTGTTTAGAAATCTGTATAACCATCAAAATATTCAATCT  300

seq1  CAGAAAATAGGAAAAAAAATTGCCAAGCTTTTTTTAATTGTCCTGGCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAATAGGAAAAAAAATTGCCAAGCTTTTTTTAATTGTCCTGGCTTA  350

seq1  ACACGGCCTCTCTATATTTCTTGTCGTAAAAACTAGGTCATAAAAGGTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGGCCTCTCTATATTTCTTGTCGTAAAAACTAGGTCATAAAAGGTAC  400

seq1  TAAAATTGCACAGACTAGAAGACTTCTCTCGGCCCCATTCTTTTCTATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTGCACAGACTAGAAGACTTCTCTCGGCCCCATTCTTTTCTATAG  450

seq1  CCTTCAAACTAAATGAAAATTCACAGAGTACAGATTAATGAATATGCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAAACTAAATGAAAATTCACAGAGTACAGATTAATGAATATGCATG  500

seq1  AGTCTCCATGCATTGACATACATATGATTTCTCATCTACAAAGCACGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCCATGCATTGACATACATATGATTTCTCATCTACAAAGCACGTTT  550

seq1  GGAAGACTTGTTATCTGACCAGAAAAGCCTGTAGTAAGTTGAGATAAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGACTTGTTATCTGACCAGAAAAGCCTGTAGTAAGTTGAGATAAAGG  600

seq1  AGACTGACTCCAATCCCTTCAGTCTCTGCAATTGCTTTATATTCTAATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGACTCCAATCCCTTCAGTCTCTGCAATTGCTTTATATTCTAATCA  650

seq1  CTGTGCTAAGCATCTGTCCCCGGCAGGCAGCCTGTTCAATCTAGCAGATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCTAAGCATCTGTCCCCGGCAGGCAGCCTGTTCAATCTAGCAGATA  700

seq1  ACGAATGCAGCGGATGGATGGATGGTGGCTGGGCTGGCCTTTCCCCACGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAATGCAGCGGATGGATGGATGGTGGCTGGGCTGGCCTTTCCCCACGT  750

seq1  GCACGTGAGGAGCCACTGTTCCATTTCTCTGATTACATGGGCAGCGGGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGTGAGGAGCCACTGTTCCATTTCTCTGATTACATGGGCAGCGGGAA  800

seq1  AGCACTCTCAGAGCTGTAATTGCCTCCGTTATGAAACATCTTCACCTGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTCTCAGAGCTGTAATTGCCTCCGTTATGAAACATCTTCACCTGTT  850

seq1  AGCCAAAGCTAAGTTGAATCACAGCAGAAATTATTAACAGTGGCTGTTTT  900
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCC-AAGCTAAGTTGAATCACAGCAGAAATTATTAACAGTGGCTGTTTT  899

seq1  CAAGCCAGCTTAATCTGAGCTGATGCTGCTGTTCATTTAACACAGATGAA  950
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CAAGCCAGCTTAATCTGAGCTGATGCTGCTGTTCATTT-ACACAGATGAA  948

seq1  TAGGT-GTGCAGGATGAGAGTCTAAGTGGAGATGACA-CACCAATGAATA  998
      ||||| ||||||||||||||||| ||||||||||||| ||||||||||||
seq2  TAGGTGGTGCAGGATGAGAGTCT-AGTGGAGATGACACCACCAATGAATA  997

seq1  TTTGCTCACAGTCCTGCTGT-GGGGAGCTGGCTTGTACAACAACAGACAA  1047
      |||||||||||| ||||||| ||||||||||||||||||   |||||| |
seq2  TTTGCTCACAGT-CTGCTGTGGGGGAGCTGGCTTGTACA--CACAGAC-A  1043

seq1  TTGTCAAAAGCTAAAGGCTGGGGGATATTGGAGCTTTGGACAGGACCTGC  1097
      |||||||||||||||||||||||  ||||||||| |||||||||| ||||
seq2  TTGTCAAAAGCTAAAGGCTGGGGATTATTGGAGC-TTGGACAGGA-CTGC  1091

seq1  TCTGTCACAATTTTCTCTGTGCTCATGAGTTCTTCCTGGCTAATG  1142
      ||||| |||| |||||||||||||||||| |||||||||||||||
seq2  TCTGT-ACAA-TTTCTCTGTGCTCATGAG-TCTTCCTGGCTAATG  1133


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