BAC Information

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BAC

Clone NameB6Ng01-191E06
Chromosome18 (Build37)
Map Location 4,501,884 - 4,651,397
singlet/doubletdoublet
Overlap geneLOC100039354, LOC433157, 9430020K01Rik
Upstream geneBambi, LOC100039273, LOC435549, EG664867, LOC621666, Lyzl1, LOC383374, LOC664909, Map3k8, Papd1, EG664931
Downstream geneLOC268988, Svil, Zfp438, LOC100039442, Zeb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191E06.bB6Ng01-191E06.g
ACCGA014803GA014804
length1,1091,082
definitionB6Ng01-191E06.b B6Ng01-191E06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(4,650,297 - 4,651,397)(4,501,884 - 4,502,966)
sequence
gaattcaacatccagagccccatgtgcccaggagacctggggatcagctc
agcagaggccactgttgggacagaaccagttacaagcccacagatgcact
tgtcaagagaccagaggctggcagctggtagaacatcatttagtcattcg
gatgcaggatttgcaagtgctgtggtgtgcttggtttcatctttaggttg
aactgtttgagttgttcaatactggcacccacttacttccccccaaagca
acatcttcttgatgaggaaacacttcctatgacatgcctcctagttttca
gtatcatttggctaccaatggaagaaggtgccttttcaggtcatccaggg
atacctgcatgggcaggggtttctgcacacacattgcattttctctttct
actctataaggtacccttttctccaagagccactattcgctttctgggtt
gatcagtaaatctcagcaacacacagaagagaagtcgttgtcgtccacgt
gaaaacacaccagtgtgacacacagctagtcatctgatcacctcactcac
aacacagaggctacttacaagagactgtgcctacttgcatagggttggga
aggggtatctggtgggtctcaggagtttgctcctatacaaaggaagggaa
aaccctgagtccagtgttcaaaagggttctctaaatcaaaaaagcagttc
aaaaaaaaaagtgtgtgcagttcaaactctgtaggaaatggaagaaactg
gtgtccaggccaaccttggtgccttgtgattcaagctgaaagaaagacag
atgcagccttaaagcagaaagaagagaaggcaggagaaaatcaagcccaa
gtttgcctggcagtaaagtttctcatatgaactcccctccagaaaccgcc
agctagaatgttttccagaggagccatggatggcaaggcccagaagtagc
cccaccaaagttttgacttttgaagagcaaggttaagaaagccctttcct
aggccttgcagcattggccgtccctcctggagcccacccagtggatatgt
aaagattgcctgcttttactatacagggcatgagaatgcctgcatgcttc
tgtgttgct

gaattccattgaacctataaattgtgttatttaatatagacattagaaca
atttagtgactcttccaaccacaaaacatgtatttttctttacttatgtt
cttttcaatttttaattgattttaattactttttttgtattaaagtacat
attttatttactttactaaaagtatagatatttcactttcttggttaagt
atattttcaatgattagattctaattgggttctactccatgccagcaaat
tggaaaatcgaggagaaacaatgttctagacttagaatgaataaatcatg
aatagaaaatcagcctagaccaacctagcctagtccggcttagccccagc
ctagcccagcctagctcagctgtaccggctagttttgtgtcaacttgaca
caggctggagttattacagagaaaggagcttcatttggggaaatacagat
cctgctgtaaggcattttcccaattagtgatcaaggagggaggtcccctt
gtgggtggtaccatctctgggctggtagtcttggttccataagagagcag
gctgagcaagccaggggaagcaagccagaaaggaacatccctccatggcc
tctgcatcaactcttgtttccttacctgcttaaattccagtcctttcctc
tccaaaaaaaaaaaaaaaaagatttattttattttatatgagtattctat
ccgcatttacatctgcatgccagaagagggcatcagatcccattacagaa
ggttgtgagccaccacatggttgctgggaattgaactcaggacctcctga
agagcagttagtgcccataactgctgaaccatctctccagttcccacctg
gcacactcttaatgcatgagcagtttctagctaaacacagtagggttgag
agctcagctgtgggactgtgggcgtctaagcactgaggcatattaagctc
ctgggtttgctttgtttatcagagtgagcagcacctgtggctagtaactg
tttgagaattctccaatgatgtcagggctgtggataatgctccatgaggc
tgaaggcaggagaatgtggagttcatgtgtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_4650297_4651397
seq2: B6Ng01-191E06.b_44_1151 (reverse)

seq1  GCAACACAGAAGCATGCAGGGCTCTTCCTGCCTTGTATAGTAAAGGCAGG  50
      ||||||||||||||||||||  |  || |||| ||||||||||| |||||
seq2  GCAACACAGAAGCATGCAGGCATTCTCATGCCCTGTATAGTAAAAGCAGG  50

seq1  CATTCTTTACATTAACCACTTGGGTGGGCT-CAGGAGGGAC-GCCAATGC  98
      || |||||||| || |||| |||||||||| |||||||||| ||||||||
seq2  CAATCTTTACA-TATCCAC-TGGGTGGGCTCCAGGAGGGACGGCCAATGC  98

seq1  TGCAAGG-CTAGG-AAGGGCTTTCTTAACCTTGCTCTTCAAAAGTCAAAC  146
      ||||||| ||||| ||||||||||||||||||||||||||||||||||| 
seq2  TGCAAGGCCTAGGAAAGGGCTTTCTTAACCTTGCTCTTCAAAAGTCAAAA  148

seq1  CTTTG--TGGGCTACTTCTTGGGCTTGCCATCCAT-GCTCCTCTGG-AAA  192
      |||||   ||||||||||| || |||||||||||| |||||||||| |||
seq2  CTTTGGTGGGGCTACTTCTGGGCCTTGCCATCCATGGCTCCTCTGGAAAA  198

seq1  CATTCTAGCTGGCGGTTTCTGGAGGGGAGTTCATATGAG-AACTTTACTG  241
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CATTCTAGCTGGCGGTTTCTGGAGGGGAGTTCATATGAGAAACTTTACTG  248

seq1  CCAGGCAAACTTGGGCTTGATTTTCTCCTGCCTTCTCTTCTTTCTGCTTT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCAAACTTGGGCTTGATTTTCTCCTGCCTTCTCTTCTTTCTGCTTT  298

seq1  AAGGCTGCATCTGTCTTTCTTTCAGCTTGAATCACAAGGCACCAAGGTTG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGCATCTGTCTTTCTTTCAGCTTGAATCACAAGGCACCAAGGTTG  348

seq1  GCCTGGACACCAGTTTCTTCCATTTCCTACAGAGTTTGAACTGCACACAC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGACACCAGTTTCTTCCATTTCCTACAGAGTTTGAACTGCACACAC  398

seq1  TTTTTTTTTTGAACTGCTTTTTTGATTTAGAGAACCCTTTTGAACACTGG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTGAACTGCTTTTTTGATTTAGAGAACCCTTTTGAACACTGG  448

seq1  ACTCAGGGTTTTCCCTTCCTTTGTATAGGAGCAAACTCCTGAGACCCACC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGGTTTTCCCTTCCTTTGTATAGGAGCAAACTCCTGAGACCCACC  498

seq1  AGATACCCCTTCCCAACCCTATGCAAGTAGGCACAGTCTCTTGTAAGTAG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACCCCTTCCCAACCCTATGCAAGTAGGCACAGTCTCTTGTAAGTAG  548

seq1  CCTCTGTGTTGTGAGTGAGGTGATCAGATGACTAGCTGTGTGTCACACTG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGTGTTGTGAGTGAGGTGATCAGATGACTAGCTGTGTGTCACACTG  598

seq1  GTGTGTTTTCACGTGGACGACAACGACTTCTCTTCTGTGTGTTGCTGAGA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTTTCACGTGGACGACAACGACTTCTCTTCTGTGTGTTGCTGAGA  648

seq1  TTTACTGATCAACCCAGAAAGCGAATAGTGGCTCTTGGAGAAAAGGGTAC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTGATCAACCCAGAAAGCGAATAGTGGCTCTTGGAGAAAAGGGTAC  698

seq1  CTTATAGAGTAGAAAGAGAAAATGCAATGTGTGTGCAGAAACCCCTGCCC  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAGAGTAGAAAGAGAAAATGCAATGTGTGTGCAGAAACCCCTGCCC  748

seq1  ATGCAGGTATCCCTGGATGACCTGAAAAGGCACCTTCTTCCATTGGTAGC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGGTATCCCTGGATGACCTGAAAAGGCACCTTCTTCCATTGGTAGC  798

seq1  CAAATGATACTGAAAACTAGGAGGCATGTCATAGGAAGTGTTTCCTCATC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGATACTGAAAACTAGGAGGCATGTCATAGGAAGTGTTTCCTCATC  848

seq1  AAGAAGATGTTGCTTTGGGGGGAAGTAAGTGGGTGCCAGTATTGAACAAC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGATGTTGCTTTGGGGGGAAGTAAGTGGGTGCCAGTATTGAACAAC  898

seq1  TCAAACAGTTCAACCTAAAGATGAAACCAAGCACACCACAGCACTTGCAA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACAGTTCAACCTAAAGATGAAACCAAGCACACCACAGCACTTGCAA  948

seq1  ATCCTGCATCCGAATGACTAAATGATGTTCTACCAGCTGCCAGCCTCTGG  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGCATCCGAATGACTAAATGATGTTCTACCAGCTGCCAGCCTCTGG  998

seq1  TCTCTTGACAAGTGCATCTGTGGGCTTGTAACTGGTTCTGTCCCAACAGT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGACAAGTGCATCTGTGGGCTTGTAACTGGTTCTGTCCCAACAGT  1048

seq1  GGCCTCTGCTGAGCTGATCCCCAGGTCTCCTGGGCACATGGGGCTCTGGA  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCTGCTGAGCTGATCCCCAGGTCTCCTGGGCACATGGGGCTCTGGA  1098

seq1  TGTTGAATTC  1101
      ||||||||||
seq2  TGTTGAATTC  1108


seq1: chr18_4501884_4502966
seq2: B6Ng01-191E06.g_65_1146

seq1  GAATTCCATTGAACCTATAAATTGTGTTATTTAATATAGACATTAGAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTGAACCTATAAATTGTGTTATTTAATATAGACATTAGAACA  50

seq1  ATTTAGTGACTCTTCCAACCACAAAACATGTATTTTTCTTTACTTATGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGTGACTCTTCCAACCACAAAACATGTATTTTTCTTTACTTATGTT  100

seq1  CTTTTCAATTTTTAATTGATTTTAATTACTTTTTTTGTATTAAAGTACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCAATTTTTAATTGATTTTAATTACTTTTTTTGTATTAAAGTACAT  150

seq1  ATTTTATTTACTTTACTAAAAGTATAGATATTTCACTTTCTTGGTTAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTTACTTTACTAAAAGTATAGATATTTCACTTTCTTGGTTAAGT  200

seq1  ATATTTTCAATGATTAGATTCTAATTGGGTTCTACTCCATGCCAGCAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTCAATGATTAGATTCTAATTGGGTTCTACTCCATGCCAGCAAAT  250

seq1  TGGAAAATCGAGGAGAAACAATGTTCTAGACTTAGAATGAATAAATCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAATCGAGGAGAAACAATGTTCTAGACTTAGAATGAATAAATCATG  300

seq1  AATAGAAAATCAGCCTAGACCAACCTAGCCTAGTCCGGCTTAGCCCCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAAAATCAGCCTAGACCAACCTAGCCTAGTCCGGCTTAGCCCCAGC  350

seq1  CTAGCCCAGCCTAGCTCAGCTGTACCGGCTAGTTTTGTGTCAACTTGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCCCAGCCTAGCTCAGCTGTACCGGCTAGTTTTGTGTCAACTTGACA  400

seq1  CAGGCTGGAGTTATTACAGAGAAAGGAGCTTCATTTGGGGAAATACAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTGGAGTTATTACAGAGAAAGGAGCTTCATTTGGGGAAATACAGAT  450

seq1  CCTGCTGTAAGGCATTTTCCCAATTAGTGATCAAGGAGGGAGGTCCCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTGTAAGGCATTTTCCCAATTAGTGATCAAGGAGGGAGGTCCCCTT  500

seq1  GTGGGTGGTACCATCTCTGGGCTGGTAGTCTTGGTTCCATAAGAGAGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTGGTACCATCTCTGGGCTGGTAGTCTTGGTTCCATAAGAGAGCAG  550

seq1  GCTGAGCAAGCCAGGGGAAGCAAGCCAGAAAGGAACATCCCTCCATGGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGCAAGCCAGGGGAAGCAAGCCAGAAAGGAACATCCCTCCATGGCC  600

seq1  TCTGCATCAACTCTTGTTTCCTTACCTGCTTAAATTCCAGTCCTTTCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCATCAACTCTTGTTTCCTTACCTGCTTAAATTCCAGTCCTTTCCTC  650

seq1  TCCAAAAAAAAAAAAAAAAAGATTTATTTTATTTTATATGAGTATTCTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAAAAAAAAAAAAAAAGATTTATTTTATTTTATATGAGTATTCTAT  700

seq1  CCGCATTTACATCTGCATGCCAGAAGAGGGCATCAGATCCCATTACAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCATTTACATCTGCATGCCAGAAGAGGGCATCAGATCCCATTACAGAA  750

seq1  GGTTGTGAGCCACCACATGGTTGCTGGGAATTGAACTCAGGACCTCCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTGAGCCACCACATGGTTGCTGGGAATTGAACTCAGGACCTCCTGA  800

seq1  AGAGCAGTTAGTGCCCATAACTGCTGAACCATCTCTCCAGTTCCCACCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGTTAGTGCCCATAACTGCTGAACCATCTCTCCAGTTCCCACCTG  850

seq1  GCACACTCTTAATGCATGAGCAGTTTCTAGCTAAACACAGTAGGGTTGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACTCTTAATGCATGAGCAGTTTCTAGCTAAACACAGTAGGGTTGAG  900

seq1  AGCTCAGCTGTGGGACTGTGGGGCGTCTAGGCACTGAGGCATA-TAAGCT  949
      ||||||||||||||||||| ||||||||| ||||||||||||| ||||||
seq2  AGCTCAGCTGTGGGACTGT-GGGCGTCTAAGCACTGAGGCATATTAAGCT  949

seq1  CCTGGTTTTGCTTTGTTTATCCAGAGTGAGCAGCAACTGTGGCTAGTAAC  999
      ||||| |||||||||||||| |||||||||||||| ||||||||||||||
seq2  CCTGGGTTTGCTTTGTTTAT-CAGAGTGAGCAGCACCTGTGGCTAGTAAC  998

seq1  TGTTTTGAGAATTCCTCCATTGATGTCAGGTGCTGTGGAATATGCT-CAT  1048
      || |||||||||| ||||| |||||||||| ||||||||  ||||| |||
seq2  TG-TTTGAGAATT-CTCCAATGATGTCAGG-GCTGTGGATAATGCTCCAT  1045

seq1  GAGGCTG-AGGCAGGAGAAATGT-GAGTTCA-ATGTCA  1083
      ||||||| ||||||||| ||||| |||||||  |||||
seq2  GAGGCTGAAGGCAGGAG-AATGTGGAGTTCATGTGTCA  1082


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