BAC Information

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BAC

Clone NameB6Ng01-191F20
Chromosome18 (Build37)
Map Location 15,212,004 - 15,212,993
singlet/doubletsinglet
Overlap geneKctd1
Upstream geneLOC100040094, LOC100040103, LOC100040391, LOC382096, LOC100040129, EG623867, Ss18, LOC100040446, Psma8, Taf4b, LOC669965, EG622268
Downstream geneLOC100040151, Aqp4, LOC665473, Chst9, LOC670012, LOC100040551, EG225228
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191F20.bB6Ng01-191F20.g
ACCGA014875GA014876
length946990
definitionB6Ng01-191F20.b B6Ng01-191F20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagactcttatcatgaatgggtgttggatttcg
tcaaatgctttctcagcatctaactagatgatcatgtggtttttgtcttg
agcttgtttatatagtggattacattgatggattttcgtatattaaacca
tccgtacatccctgggatgaaacctacttgttcatgaccgatgatcattt
tgatgtgttcttggattcggtttccagggattttattgagtatttttgca
ttgatattcgtaagagaaattggtctggctcggcgtggtggcgcatgcct
ttaatcctagcagaggcaggcggatttctgagatcgaggccagcctggtc
tatagagtgagttccaggacagccagggctacaaagaaaaacactgtctc
gaaaaaccaaagagagagagagagagagagagagagagagaaattggtct
gaagttctctttctttgttggatctttgtgtggtttaggtatcagtaatt
gtggcttcatagaatgaattgggtagagtaccttctgtttctattttgtg
aaatagtttgagaagagttggaattaggtcttctttgaaggtctgataga
actgcactaaacccatctggtcctgggctttttttggttgggagactatt
gatgactgcttctatttctttaggggaaatgggactgtttagatcattaa
tctgatcctcatttaactttggtacctggtatctgtgtaggaagttgtcc
atttcatccaggtttttccagtttgttgagtatagccttttttagtagga
tctgatggtgttttagatttccctcatgttctgttattatgtctcctttt
tcatttctgattttggtaattagggatactgtccctgtggcctctagata
gtctggcctaagggtttatctatcttgttgatcttctcaaagaaac
gaattcagttcagccataaccgagtttcttgctgtgtgctacaaagagga
acagggtctagacccttccctttgtgcagattgtcaggggaaggagagtc
aaggcagttctctgtgtagtcacaaacacagtagaaacaggcaaactctt
ccagcctggcctctggaacttcttttgggttttcagcttatagctctctc
ttagcttcctctttccctctttccagagaggacaggctacatggtgtgga
tggtttcagtgtgctctgtaaatgagcaggaatgccctgtgaaatgcctt
gatacagccaaggctgtggccaaggctgaacacagatctaaggctgcgcc
tgctcatgcccatgactgtaaattgggtaagaaagcttgctacagtgagc
tacaagaggccagacttttaaggtctttagtaattctggtccctctgatc
tacactttgtcaagctgtcttttcaatctgagagacagtcatttgatttt
taacagtgaattaagtgacatttttgtcttatgtcatggcttaaattttg
ctcaagtcatagataagtctttttgttttaattataaaagtaggagctgt
tgtacagtactgtgaagccagaaggtgggggctttgattacccccccccc
caactgcttgcttgttggcatccttcagtgcttgcccagggctttccaca
gtgttagtcctaggaagtcttatctggagaccctctacattctgtggtgt
gtaatttgagctcctgccttttgccaggtattgaccttagttgtgttttt
aattccctgccctcttccccctccccacttgccatgccccacccctctaa
cctcccagcactggcagagtgaggatagtgacagtcctcaatggcgaacc
ctctagagacaccccaagactgagagcactgtcagtgatccttaaagaag
aaaaagtggtgcaggcttaaagagtggccttgttccttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_15212004_15212993
seq2: B6Ng01-191F20.g_65_1054 (reverse)

seq1  GGGAGGAACAAAGCCACTCTTTTAGCCTGCACCACTTTTTC-TCTTTTAA  49
      || |||||||| |||||||||| |||||||||||||||||| ||||| | 
seq2  GGAAGGAACAAGGCCACTCTTTAAGCCTGCACCACTTTTTCTTCTTTAAG  50

seq1  GATCACTG-CAGTGCTCTCAGTTCTTGGGGTGTCTCTAGAGGGTTCGCCA  98
      |||||||| |||||||||||| ||||||||||||||||||||||||||||
seq2  GATCACTGACAGTGCTCTCAG-TCTTGGGGTGTCTCTAGAGGGTTCGCCA  99

seq1  TTGGAGACTGTCACTATCCTCACTCTGCCAGTGCCTGGGAGGTTAGAGGG  148
      |||  |||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTGAGGACTGTCACTATCCTCACTCTGCCAGTG-CTGGGAGGTTAGAGGG  148

seq1  GTGGGGCATGGCAAGTGGGGAGGGGGAAGAGGGCAGGGAATTAAAAACAC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGCATGGCAAGTGGGGAGGGGGAAGAGGGCAGGGAATTAAAAACAC  198

seq1  AACTAAGGTCAATACCTGGCAAAAGGCAGGAGCTCAAATTACACACCACA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAGGTCAATACCTGGCAAAAGGCAGGAGCTCAAATTACACACCACA  248

seq1  GAATGTAGAGGGTCTCCAGATAAGACTTCCTAGGACTAACACTGTGGAAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTAGAGGGTCTCCAGATAAGACTTCCTAGGACTAACACTGTGGAAA  298

seq1  GCCCTGGGCAAGCACTGAAGGATGCCAACAAGCAAGCAGTTGGGGGGGGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGGGCAAGCACTGAAGGATGCCAACAAGCAAGCAGTTGGGGGGGGG  348

seq1  GGTAATCAAAGCCCCCACCTTCTGGCTTCACAGTACTGTACAACAGCTCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATCAAAGCCCCCACCTTCTGGCTTCACAGTACTGTACAACAGCTCC  398

seq1  TACTTTTATAATTAAAACAAAAAGACTTATCTATGACTTGAGCAAAATTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTATAATTAAAACAAAAAGACTTATCTATGACTTGAGCAAAATTT  448

seq1  AAGCCATGACATAAGACAAAAATGTCACTTAATTCACTGTTAAAAATCAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCATGACATAAGACAAAAATGTCACTTAATTCACTGTTAAAAATCAA  498

seq1  ATGACTGTCTCTCAGATTGAAAAGACAGCTTGACAAAGTGTAGATCAGAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTGTCTCTCAGATTGAAAAGACAGCTTGACAAAGTGTAGATCAGAG  548

seq1  GGACCAGAATTACTAAAGACCTTAAAAGTCTGGCCTCTTGTAGCTCACTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCAGAATTACTAAAGACCTTAAAAGTCTGGCCTCTTGTAGCTCACTG  598

seq1  TAGCAAGCTTTCTTACCCAATTTACAGTCATGGGCATGAGCAGGCGCAGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAGCTTTCTTACCCAATTTACAGTCATGGGCATGAGCAGGCGCAGC  648

seq1  CTTAGATCTGTGTTCAGCCTTGGCCACAGCCTTGGCTGTATCAAGGCATT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGATCTGTGTTCAGCCTTGGCCACAGCCTTGGCTGTATCAAGGCATT  698

seq1  TCACAGGGCATTCCTGCTCATTTACAGAGCACACTGAAACCATCCACACC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGGGCATTCCTGCTCATTTACAGAGCACACTGAAACCATCCACACC  748

seq1  ATGTAGCCTGTCCTCTCTGGAAAGAGGGAAAGAGGAAGCTAAGAGAGAGC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGCCTGTCCTCTCTGGAAAGAGGGAAAGAGGAAGCTAAGAGAGAGC  798

seq1  TATAAGCTGAAAACCCAAAAGAAGTTCCAGAGGCCAGGCTGGAAGAGTTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGCTGAAAACCCAAAAGAAGTTCCAGAGGCCAGGCTGGAAGAGTTT  848

seq1  GCCTGTTTCTACTGTGTTTGTGACTACACAGAGAACTGCCTTGACTCTCC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTTTCTACTGTGTTTGTGACTACACAGAGAACTGCCTTGACTCTCC  898

seq1  TTCCCCTGACAATCTGCACAAAGGGAAGGGTCTAGACCCTGTTCCTCTTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTGACAATCTGCACAAAGGGAAGGGTCTAGACCCTGTTCCTCTTT  948

seq1  GTAGCACACAGCAAGAAACTCGGTTATGGCTGAACTGAATTC  990
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCACACAGCAAGAAACTCGGTTATGGCTGAACTGAATTC  990