BAC Information

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BAC

Clone NameB6Ng01-191O04
Chromosome18 (Build37)
Map Location 62,949,651 - 63,057,743
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042738, Ablim3, Sh3tc2, Adrb2, Htr4, Fbxo38, Spink10, EG408198, 2700046A07Rik
Downstream geneApcdd1, Napg, 9430028L06Rik, 9030411M15Rik, LOC627792, Txnl1, Wdr7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191O04.bB6Ng01-191O04.g
ACCGA015269GA015270
length1,1621,088
definitionB6Ng01-191O04.b B6Ng01-191O04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,949,651 - 62,950,804)(63,056,667 - 63,057,743)
sequence
gaattcagatgtctgctagcttctcttgtgtacttaacactcctaggcca
ccctctgagtccctggttagtcttgttggcttcagcactcctaccattca
tgcactgttaaatgagaagaacactaaaagttccagaaacacagtcctcc
caatacctcctgccaccatgggagccatgctacagaattcagttacctag
agacttcaggacttacattgtggcacagttctgccccttccctatcaact
gcctcttcccaaatcaggcagctctctatattgtgaagtaagccaaaacc
ctgctcccaaggcaccacttttttgttctcttggtctatgtaaaatgtag
ctccatctcttactcactgcatcctgagggccgctcttgtcctggggaat
tcataatccccagagttgcacccttgccctcacagcaagcaaggttttgg
cacgtctcaccaaaacaaggctaaatgccaataaatctggagtcatggga
taaactcttttaaagaaagactctgaaggcagactcccatagaatagaaa
cagccacactttctggcttaactcaacatacatttagattcaattttagc
ccagcctgttttatattgctaataagaaaatagctgaagcttgtaggtta
taaaccaaagcactttatctcattacaattctggtagctacaacatataa
acagcaaggcttgaatccctggctgttacaacatggcagaagacttgaag
ctaaccatgggcagaagggaccaaagggactaggtagccttactttatat
caaatcattctctgaaagctaactctgatcttaaagaaattacactaaat
taatccttttatgcagctatgtctaggttaattacacaattccctttcca
cctagatccccatttgctcaagatccatttttccttaattgtgttacact
gttcaccaggctttgcagctcatggaatctttagtagccatcaagtaaga
tgaatttctgttgccgtaataaaacactacgaccaatagccaacttcagg
aggaaggaattatttcaggaatagttccatcatcaagggaatcaggtcag
aactcaggctgttgagaactcggagaacgagctgaactcaaaggccattg
aagaattgctgc
ggcacagatccaacacccagccctaccaaggctatgtggtaccagacaaa
gggcacttttactggtggttccatccagagaggctgcctttttctcagca
gcacagtatctttttagatgccagcctatatctctatagctggtgcccat
ttctgaactgcacaagggcacttcatagtggctaagtgctggtgatggct
ttaagccaccaatgaccactaagccttcccatcatcatgctggctgttag
cacaagccagcagcctatgcccttgctgacagaggagattcagggtcacc
tgccagtccatagtgagagtttgtagtatttagattttttttttcttctt
agcaagatgtctgtgatattatactctttcattaacacacattttaaaaa
ttctatgctataaagctctatggagttgttaatttttcttgttgcataca
atttttttcccatttcgtaagtaaatccttacagatgcctggggcgttcc
taacacctccagtttcctcactcatccacatttgaatgtacctaggatgt
catagctgcatcccctgtggagggcagagttgaccactgccaccttcgtt
tatgtccctgttcatttaacagaaatgtgtgaacacataacatcctatga
gtgttggagccagaaaacaccggaagtccttgctcccatttacatacagt
tcctgattcagaagatgtgactgcctataccaccatcttcctgatttggg
aaaaaaaatttagtgtccaaaaagagatattttgttctttgtttctgaga
agctaagtgtttccctggtataagacaaaggaggagacataaagtcatat
agatgtaggcaagctgcaagtggctcatgggccagggctctggctacatg
tttgtcaccttcagtcttttataaagatgactgtaagagggccagtcatt
cctcctataccaagcctgggtacatgaagtgagcttcttgctcaacctaa
agtacattggccatcaccctgtttttccgaaccaattcctcaattaagaa
aaaaattaccaaggaatgtccaaatgcactgatcttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_62949651_62950804
seq2: B6Ng01-191O04.b_45_1206

seq1  GAATTCAGATGTCTGCTAGCTTCTCTTGTGTACTTAACACTCCTAGGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATGTCTGCTAGCTTCTCTTGTGTACTTAACACTCCTAGGCCA  50

seq1  CCCTCTGAGTCCCTGGTTAGTCTTGTTGGCTTCAGCACTCCTACCATTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTGAGTCCCTGGTTAGTCTTGTTGGCTTCAGCACTCCTACCATTCA  100

seq1  TGCACTGTTAAATGAGAAGAACACTAAAAGTTCCAGAAACACAGTCCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTGTTAAATGAGAAGAACACTAAAAGTTCCAGAAACACAGTCCTCC  150

seq1  CAATACCTCCTGCCACCATGGGAGCCATGCTACAGAATTCAGTTACCTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACCTCCTGCCACCATGGGAGCCATGCTACAGAATTCAGTTACCTAG  200

seq1  AGACTTCAGGACTTACATTGTGGCACAGTTCTGCCCCTTCCCTATCAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTCAGGACTTACATTGTGGCACAGTTCTGCCCCTTCCCTATCAACT  250

seq1  GCCTCTTCCCAAATCAGGCAGCTCTCTATATTGTGAAGTAAGCCAAAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTTCCCAAATCAGGCAGCTCTCTATATTGTGAAGTAAGCCAAAACC  300

seq1  CTGCTCCCAAGGCACCACTTTTTTGTTCTCTTGGTCTATGTAAAATGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCCAAGGCACCACTTTTTTGTTCTCTTGGTCTATGTAAAATGTAG  350

seq1  CTCCATCTCTTACTCACTGCATCCTGAGGGCCGCTCTTGTCCTGGGGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATCTCTTACTCACTGCATCCTGAGGGCCGCTCTTGTCCTGGGGAAT  400

seq1  TCATAATCCCCAGAGTTGCACCCTTGCCCTCACAGCAAGCAAGGTTTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAATCCCCAGAGTTGCACCCTTGCCCTCACAGCAAGCAAGGTTTTGG  450

seq1  CACGTCTCACCAAAACAAGGCTAAATGCCAATAAATCTGGAGTCATGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTCTCACCAAAACAAGGCTAAATGCCAATAAATCTGGAGTCATGGGA  500

seq1  TAAACTCTTTTAAAGAAAGACTCTGAAGGCAGACTCCCATAGAATAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTCTTTTAAAGAAAGACTCTGAAGGCAGACTCCCATAGAATAGAAA  550

seq1  CAGCCACACTTTCTGGCTTAACTCAACATACATTTAGATTCAATTTTAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCACACTTTCTGGCTTAACTCAACATACATTTAGATTCAATTTTAGC  600

seq1  CCAGCCTGTTTTATATTGCTAATAAGAAAATAGCTGAAGCTTGTAGGTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCTGTTTTATATTGCTAATAAGAAAATAGCTGAAGCTTGTAGGTTA  650

seq1  TAAACCAAAGCACTTTATCTCATTACAATTCTGGTAGCTACAACATATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCAAAGCACTTTATCTCATTACAATTCTGGTAGCTACAACATATAA  700

seq1  ACAGCAAGGCTTGAATCCCTGGCTGTTACAACATGGCAGAAGACTTGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAAGGCTTGAATCCCTGGCTGTTACAACATGGCAGAAGACTTGAAG  750

seq1  CTAACCATGGGCAGAAGGGACCAAAGGGACTAGGTAGCCTTACTTTATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCATGGGCAGAAGGGACCAAAGGGACTAGGTAGCCTTACTTTATAT  800

seq1  CAAATCATTCTCTGAAAGCTAACTCTGATCTTAAAG-AATTACACT-AAT  848
      |||||||||||||||||||||||||||||||||||| ||||||||| |||
seq2  CAAATCATTCTCTGAAAGCTAACTCTGATCTTAAAGAAATTACACTAAAT  850

seq1  TAATCCTTTTATGCAGCTATGTCTA-GTTAATTACACAATTCCC-TTCCA  896
      ||||||||||||||||||||||||| |||||||||||||||||| |||||
seq2  TAATCCTTTTATGCAGCTATGTCTAGGTTAATTACACAATTCCCTTTCCA  900

seq1  -CTAGATCCCCA-TTGCTCAAGATCCATTTTT-CTTAATTGTGTTACACT  943
       ||||||||||| ||||||||||||||||||| |||||||||||||||||
seq2  CCTAGATCCCCATTTGCTCAAGATCCATTTTTCCTTAATTGTGTTACACT  950

seq1  GTTCACCAGGC-TTGCAGCTCAT-GAATCTTTAGTAGCCATCAAGTAAGA  991
      ||||||||||| ||||||||||| ||||||||||||||||||||||||||
seq2  GTTCACCAGGCTTTGCAGCTCATGGAATCTTTAGTAGCCATCAAGTAAGA  1000

seq1  TG-ATTTCTGTTGCCGTAATAAAACACTACGACCAATAG-CAACTTCAAG  1039
      || |||||||||||||||||||||||||||||||||||| |||||||| |
seq2  TGAATTTCTGTTGCCGTAATAAAACACTACGACCAATAGCCAACTTCAGG  1050

seq1  AGGAAAGGAATTATTTCAAGGAATAG-TCCATCATCAAGGGAAATCAGGG  1088
      ||| ||||||||||||| |||||||| |||||||||||||| ||||||| 
seq2  AGG-AAGGAATTATTTC-AGGAATAGTTCCATCATCAAGGG-AATCAGGT  1097

seq1  CAGGAACTCAAGCAGGGTGAGAACCCGGAGACAGGAGCTGAA-GCAGAGG  1137
      || ||||||| ||  | ||||||| |||||| | ||||||||  || |||
seq2  CA-GAACTCAGGC-TGTTGAGAACTCGGAGA-ACGAGCTGAACTCAAAGG  1144

seq1  CCATGAAAGAA-TGCTGC  1154
      ||||  ||||| ||||||
seq2  CCATTGAAGAATTGCTGC  1162

seq1: chr18_63056667_63057743
seq2: B6Ng01-191O04.g_80_1167 (reverse)

seq1  CCAAG-TCAGTGCATTT-GACATTCCTCTGGTATTTTTTTTTTTATTTGA  48
      ||||| ||||||||||| ||||||||| ||||| ||||||| ||| ||||
seq2  CCAAGATCAGTGCATTTGGACATTCCT-TGGTAATTTTTTTCTTAATTGA  49

seq1  GGAATTTGGTCTGAAAAACAGGGTTGATGG-CAATGTACTTT-GTGTGAG  96
      |||||| | || ||||||||||| |||||| ||||||||||| |  ||||
seq2  GGAATTGGTTCGGAAAAACAGGG-TGATGGCCAATGTACTTTAGGTTGAG  98

seq1  CA--GAGCTCACTCCATGTACC--AGCTTGGTATAGGA-GAATGACT-GC  140
      ||   |||||||| ||||||||   ||||||||||||| |||||||| ||
seq2  CAAGAAGCTCACTTCATGTACCCAGGCTTGGTATAGGAGGAATGACTGGC  148

seq1  CCTCTTACAGTCATCTTTAT-AAAGACTGGAGGTGACAAACATGTAGCCA  189
      |||||||||||||||||||| |||||||| ||||||||||||||||||||
seq2  CCTCTTACAGTCATCTTTATAAAAGACTGAAGGTGACAAACATGTAGCCA  198

seq1  GAGCCCTGG-CCATGAGCCACCTTGCAGCTTGCCTACATCTATATGACTT  238
      ||||||||| |||||||||| |||||||||||||||||||||||||||||
seq2  GAGCCCTGGCCCATGAGCCA-CTTGCAGCTTGCCTACATCTATATGACTT  247

seq1  TATGTCT-CTCCTTTGTCTTATACCAGGGAAACACTTAGCTTCTCAGAAA  287
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTCCTCCTTTGTCTTATACCAGGGAAACACTTAGCTTCTCAGAAA  297

seq1  CAAAGAACAAAATATCTCTTTTTGGACACT-AATTTTTTTTCCCAAATCA  336
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CAAAGAACAAAATATCTCTTTTTGGACACTAAATTTTTTTTCCCAAATCA  347

seq1  GGAAGATGGTGGTATAGGCAGTCACATCTTCTGAATCAGGAACTGTATGT  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGATGGTGGTATAGGCAGTCACATCTTCTGAATCAGGAACTGTATGT  397

seq1  AAATGGGAGCAAGGACTTCCGGTGTTTTCTGGCTCCAACACTCATAGGAT  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGGAGCAAGGACTTCCGGTGTTTTCTGGCTCCAACACTCATAGGAT  447

seq1  GTTATGTGTTCACACATTTCTGTTAAATGAACAGGGACATAAACGAAGGT  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGTGTTCACACATTTCTGTTAAATGAACAGGGACATAAACGAAGGT  497

seq1  GGCAGTGGTCAACTCTGCCCTCCACAGGGGATGCAGCTATGACATCCTAG  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTGGTCAACTCTGCCCTCCACAGGGGATGCAGCTATGACATCCTAG  547

seq1  GTACATTCAAATGTGGATGAGTGAGGAAACTGGAGGTGTTAGGAACGCCC  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATTCAAATGTGGATGAGTGAGGAAACTGGAGGTGTTAGGAACGCCC  597

seq1  CAGGCATCTGTAAGGATTTACTTACGAAATGGGAAAAAAATTGTATGCAA  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCATCTGTAAGGATTTACTTACGAAATGGGAAAAAAATTGTATGCAA  647

seq1  CAAGAAAAATTAACAACTCCATAGAGCTTTATAGCATAGAATTTTTAAAA  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAAAATTAACAACTCCATAGAGCTTTATAGCATAGAATTTTTAAAA  697

seq1  TGTGTGTTAATGAAAGAGTATAATATCACAGACATCTTGCTAAGAAGAAA  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTTAATGAAAGAGTATAATATCACAGACATCTTGCTAAGAAGAAA  747

seq1  AAAAAAATCTAAATACTACAAACTCTCACTATGGACTGGCAGGTGACCCT  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATCTAAATACTACAAACTCTCACTATGGACTGGCAGGTGACCCT  797

seq1  GAATCTCCTCTGTCAGCAAGGGCATAGGCTGCTGGCTTGTGCTAACAGCC  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTCCTCTGTCAGCAAGGGCATAGGCTGCTGGCTTGTGCTAACAGCC  847

seq1  AGCATGATGATGGGAAGGCTTAGTGGTCATTGGTGGCTTAAAGCCATCAC  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGATGATGGGAAGGCTTAGTGGTCATTGGTGGCTTAAAGCCATCAC  897

seq1  CAGCACTTAGCCACTATGAAGTGCCCTTGTGCAGTTCAGAAATGGGCACC  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACTTAGCCACTATGAAGTGCCCTTGTGCAGTTCAGAAATGGGCACC  947

seq1  AGCTATAGAGATATAGGCTGGCATCTAAAAAGATACTGTGCTGCTGAGAA  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATAGAGATATAGGCTGGCATCTAAAAAGATACTGTGCTGCTGAGAA  997

seq1  AAAGGCAGCCTCTCTGGATGGAACCACCAGTAAAAGTGCCCTTTGTCTGG  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCAGCCTCTCTGGATGGAACCACCAGTAAAAGTGCCCTTTGTCTGG  1047

seq1  TACCACATAGCCTTGGTAGGGCTGGGTGTTGGATCTGTGCC  1077
      |||||||||||||||||||||||||||||||||||||||||
seq2  TACCACATAGCCTTGGTAGGGCTGGGTGTTGGATCTGTGCC  1088