BAC Information

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BAC

Clone NameB6Ng01-192A23
Chromosome18 (Build37)
Map Location 65,180,556 - 65,181,201
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC629436, LOC667773, St8sia3, LOC433193, Onecut2, LOC667783, LOC100043304, Fech, Nars, Atp8b1, LOC629480
Downstream geneNedd4l, Alpk2, LOC667816, Malt1, LOC638570, LOC100042820, Zfp532, 5330437I02Rik, Sec11c, Grp, Rax, Cplx4, Lman1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192A23.b
ACCGA015395
length1,105
definitionB6Ng01-192A23.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgctgttaacaagattacatgtcacactgctgatgccccacct
ttgatattatgaccggatgttacgatacaaaaaaaaaattcataaacatt
gaaaaatctcaaattgggggctagaaagtttgttcagaggataagaatat
gttcgcttacatgtcataatcgggtggagttattttctcaattagatgtt
ctctgctcttaaatgattccattgtgtggcaaactgacataaacctggtc
aggtttctaccatatgtccaaggaaaaattaataacacttctccacaccc
tcctctaatatactgcaaaggaacgaacgcctcttgcatcattctgtgaa
gccagagcttccctgccttaaaaatcttgtatgtctgacagtgtctgcat
gtatgtatgtatgtatgtatgtatgtatgtatgtgagtgtgaatggataa
aattaagcttattataaataagatttctgctgtatttgcacttacatgca
accagcacactgtggtgatgaggttacaaaacagatgttttcctcagtgt
gaagtcctgacaatccccgccttcctcactgcactcagtagcatccttgt
ctgttacactccagaccccggatgcctccccccacctcaggtcccttgta
tcactgctagtctcctggcagctgcttatgaaacctaacgtttattggac
tcttcccctgctgcttttctttataaatttacagcatcgagttaagagac
ttgacacagcggcatctctttaacatgagttttctaaggtcatctttcct
cacagtccctcacttctggtaattactccccccaccccccaagattggtg
tcttagttcaggttttactgctgtgagcagaccaccatgaccgtgtcaac
tcttataaggaccacaacattcaataggggctggcttacaggttcggagg
ttcagtcccattattcatcaaggttaggagcacggcattgttcaggcagg
aatggttgcaggaaaggctgagagggctacattctttttctgaaagctgc
ttgtggaagactggctttcaggcagcttaggggggagggtcttaaagccc
actcc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_65180556_65181201
seq2: B6Ng01-192A23.b_489_1149

seq1  GGATAAAATTAAGCTTATTATAAATAAGATTTCTGCTGTATTTGCACTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAAATTAAGCTTATTATAAATAAGATTTCTGCTGTATTTGCACTTA  50

seq1  CATGCAACCAGCACACTGTGGTGATGAGGTTACAAAACAGATGTTTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAACCAGCACACTGTGGTGATGAGGTTACAAAACAGATGTTTTCCT  100

seq1  CAGTGTGAAGTCCTGACAATCCCCGCCTTCCTCACTGCACTCAGTAGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTGAAGTCCTGACAATCCCCGCCTTCCTCACTGCACTCAGTAGCAT  150

seq1  CCTTGTCTGTTACACTCCAGACCCCGGATGCCTCCCCCCACCTCAGGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTCTGTTACACTCCAGACCCCGGATGCCTCCCCCCACCTCAGGTCC  200

seq1  CTTGTATCACTGCTAGTCTCCTGGCAGCTGCTTATGAAACCTAACGTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTATCACTGCTAGTCTCCTGGCAGCTGCTTATGAAACCTAACGTTTA  250

seq1  TTGGACTC-TCCCCTGCTGCTTT--CTTATAAA-TTACAGCATCGAG-TA  295
      |||||||| ||||||||||||||   ||||||| ||||||||||||| ||
seq2  TTGGACTCTTCCCCTGCTGCTTTTCTTTATAAATTTACAGCATCGAGTTA  300

seq1  AGAGACTTGACACAGCGGCATCTCTTAAACATGAGTTTTCTAAGGTCATC  345
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGAGACTTGACACAGCGGCATCTCTTTAACATGAGTTTTCTAAGGTCATC  350

seq1  TTTCCTCACAGT-CCTCACTTCTGGTAATTACTCCCCCCACCCCCCAAGA  394
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCACAGTCCCTCACTTCTGGTAATTACTCCCCCCACCCCCCAAGA  400

seq1  TTGGTGTCTTAGTTCAGGTTTTACTGCTGTGAGCAGA-CACCATGACCGT  443
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTGGTGTCTTAGTTCAGGTTTTACTGCTGTGAGCAGACCACCATGACCGT  450

seq1  GTCAACTCTTATAAGGA-CACAACATTCAATAGGGGCTGGCTTACAGGTT  492
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GTCAACTCTTATAAGGACCACAACATTCAATAGGGGCTGGCTTACAGGTT  500

seq1  CGGAGGTTCAGT-CCATTA-TCATCAAGG-TAGGAGCACGGCAATGTCCA  539
      |||||||||||| |||||| ||||||||| ||||||||||||| ||| ||
seq2  CGGAGGTTCAGTCCCATTATTCATCAAGGTTAGGAGCACGGCATTGTTCA  550

seq1  GGCAGGAATGG-TGCAGGAGAGGCTGAGAGTGCTACA-TCTTTATCTGAA  587
      ||||||||||| ||||||| |||||||||| |||||| ||||| ||||||
seq2  GGCAGGAATGGTTGCAGGAAAGGCTGAGAGGGCTACATTCTTTTTCTGAA  600

seq1  GGCTGCTAGTGGAAGACTGGCTTCCAGGCAGCT--AGGGTGAGGGTCTTA  635
       |||||| ||||||||||||||| |||||||||   ||| ||||||||||
seq2  AGCTGCTTGTGGAAGACTGGCTTTCAGGCAGCTTAGGGGGGAGGGTCTTA  650

seq1  AAGCCCACTCC  646
      |||||||||||
seq2  AAGCCCACTCC  661