BAC Information

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BAC

Clone NameB6Ng01-192N07
Chromosome18 (Build37)
Map Location 58,923,579 - 59,065,810
singlet/doubletdoublet
Overlap geneAdamts19
Upstream geneSlc12a2, 9330166H04Rik, Fbn2, Slc27a6, Isoc1
Downstream geneA730017C20Rik, 4833446K15Rik, LOC667549
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192N07.bB6Ng01-192N07.g
ACCGA015965GA015966
length9311,115
definitionB6Ng01-192N07.b B6Ng01-192N07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,064,783 - 59,065,810)(58,923,579 - 58,924,698)
sequence
gaattctccatatgtgaggttgcagactgggtcgaactcatgtgcgcagg
tgccgcctatcctgaatgatagaaaatggaaaaagagcccagggaacacc
tttaacaatgaagtgtatgttctgctttcagcacatgccagcatctattc
atctgctcattaaaatggtcttaatttcgcataaacttttcaagagtgag
gtaactttgaatgaatgaaagaaagaaagaaagaaagaaagaaagaaaga
aagaaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggag
agaaagaaagatagagatagagagatagagagatagagagagagagagag
aaaggaaggaagagaggaaagacagacagactggctgactgactagtaaa
ttttatattgtactgggaagagaaagaagcctgcgtggaggtaacagcta
ctgtagtaattgggccagaacaatggaagtggaagctaacatccagatct
tggtattaatgtttccacatctaagagcaaagattcattcactcattaag
cagaggtcacagcttcattcacataaatatgaaattctggtatgatgatg
atgatcatagtttaaattgaagcacggaattctgaaatatgtagtctatt
gagtattgtctgaagtggtatagattcgatagctatgaacagacatgagt
gagaagatgatgaacgtgatgatcaagatagataatgattcataatgctg
gattatgattaactcattgtggcttgatgagactctagtcaagatcatag
tcaatacatagatccattcctgtcatagatggatttgtcactacacaatg
tcagatatgttagtacactgtattgtgctgtgtggattagtgatctagat
cgatcatgatgctgatctaacactgtgcagt

gaattcatacactatggcatattgtccatccataaaagtttagaacccca
cagaaacgtcgctgaaactcatggtcattatgttaaagggaaaagacaca
gacggatgaggacaaaacatttttctctttcaattgtgaaaaatgtaagt
tgatctcatagagtaaaatgcaacagtgctcacttgcacgagggaaggcc
aggaagaagagtatagaaggaagttcaatataaactgcgacacaaggttg
agtagagtatcgctttttctatagtactatgggggtagctattacctaaa
gctatatgtatttcaaaatatctagagaactgaacattctcaacatgtag
cagtgattattttttgaagagatggtaatgctcattgtaaggctatgatt
actacacatcatgcacattcattaaagtgtcatgacccacgcataaagat
gtatggatgcttcggtaaaataagtagctcaaccccatttcgttcaatca
aggaataagaacctctcacctcgctgggcgtggtggcgtgcacctttaat
cccagcattcaggaggcagaggtaggcggatctctgagttcgaggccaac
ctggtcttccccagtttcaactcctgcagcagtcaagtttacctctgtgg
ttgttttaactctcagttgtcagactcaacacacatcacttaacgatctc
ctaagagagcaggaaggacttttatcaattcatttctcagtgtgtcctag
atgatgacactgtctcaatttctaaaattctgggtttttttttgtttgtt
tttcttctgtagttttctttgggaaactcagggacagataatttgtattg
ctttaagctgttttaagattttcctgtttagagaacctaatattgaatca
ttcttcttgcggtgaattttaaagtgttgtatatttacccacttttctcc
ccaaaatgagacattgtggtgtggatgttatgggcctcccctggccatac
ctggtggaatattactagtttctttggcattttccttcctacctgttact
actgcatttctatgtaacctgtagacatgttggtttgaatacactaacat
gctcaatggattagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_59064783_59065810
seq2: B6Ng01-192N07.b_43_973 (reverse)

seq1  ACTGCACAGTTGTTTTTAGATCAAGCATTCATGTATCAAATACCCTAGAT  50
      |||||||||    | ||||||| |||| ||||| ||| |     ||||||
seq2  ACTGCACAG----TGTTAGATC-AGCA-TCATG-ATCGA----TCTAGAT  39

seq1  CAAATTTTATATATTTAACAACAGCAACAAAATACAAGTGTTACCAAAAA  100
      |           | | | | ||| || || ||||| |||||    |  ||
seq2  C-----------ACTAATCCACA-CAGCACAATAC-AGTGT----ACTAA  72

seq1  CATATTCTTGAACATTTGTGGTAGTGACAAATATCCCCAATCTATTGACA  150
      |||| |||   ||| |||| ||||||||||||     | ||||| |||||
seq2  CATA-TCT--GACA-TTGT-GTAGTGACAAAT-----CCATCTA-TGACA  111

seq1  AGTGAATGGATCTATTGTTATTTGACTAATGGATCTTTTTGACTTAAGAA  200
         ||||||||||| |||   |||||||   ||||   ||||||  || |
seq2  --GGAATGGATCTA-TGT--ATTGACTA--TGATC---TTGACT--AG-A  148

seq1  GTCTTCATCAAGCCCACCAATGAGTTTAAAATCATAATCCAGCATTTATG  250
      ||| ||||||||||   |||||||||   ||||||||||||||| |||||
seq2  GTC-TCATCAAGCC--ACAATGAGTT---AATCATAATCCAGCA-TTATG  191

seq1  AAATCATTATTCTTATCTTTTTGATCATCACGTTTCATTCATCTTTCTCA  300
       |||||||||   ||||   |||||||||||| |||| ||||| ||||||
seq2  -AATCATTAT--CTATC---TTGATCATCACG-TTCA-TCATC-TTCTCA  232

seq1  CTTCATGTCTGTTTTCATTAGCTATCGAATCTATACCACTTTCAGACAAA  350
      | |||||||||  |||| ||||||||||||||||||||| ||||||| ||
seq2  C-TCATGTCTG--TTCA-TAGCTATCGAATCTATACCAC-TTCAGAC-AA  276

seq1  TACCTCCAATAGACCTACATATTTTTCAGAATTCCGTTGCTTCAATTTTA  400
      |||   ||||||| |||||||  ||||||||||||| |||||||||||  
seq2  TAC--TCAATAGA-CTACATA--TTTCAGAATTCCG-TGCTTCAATTT--  318

seq1  AAACTATTGATCATCATCATCATTACCAGAATTTTCATATTTTATTGTGA  450
      |||||| ||||||||||||||| |||||||| ||||||||||   |||||
seq2  AAACTA-TGATCATCATCATCA-TACCAGAA-TTTCATATTT--ATGTGA  363

seq1  ATTGAAGCCTGTGACCCTCTTGCTTAAATGAGTGAATGAATCTTTTGCTC  500
      | ||||| |||||| |||| ||||| |||||||||||||||| |||||||
seq2  A-TGAAG-CTGTGA-CCTC-TGCTT-AATGAGTGAATGAATC-TTTGCTC  407

seq1  TTAGATGTGGGAAAACATTAATACCAAGATCTGGATGTTAGCTTCCACTT  550
      ||||||||||  |||||||||||||||||||||||||||||||||||| |
seq2  TTAGATGTGG--AAACATTAATACCAAGATCTGGATGTTAGCTTCCAC-T  454

seq1  TCCATTGTTTCTGGCCCAATTACTACAGTAGCTGTTACCTCCACGCAGGC  600
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTG-TTCTGGCCCAATTACTACAGTAGCTGTTACCTCCACGCAGGC  503

seq1  TTCTTTCTCTTCCCAGTACAATATAAAATTTACTAGTCAGTCAGCCAGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTCTTCCCAGTACAATATAAAATTTACTAGTCAGTCAGCCAGTC  553

seq1  TGTCTGTCTTTCCTCTCTTCCTTCCTTTCTCTCTCTCTCTCTCTATCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTCTTTCCTCTCTTCCTTCCTTTCTCTCTCTCTCTCTCTATCTCT  603

seq1  CTATCTCTCTATCTCTATCTTTCTTTCTCTCCTTCCTTCCTTCCTTCCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTCTCTATCTCTATCTTTCTTTCTCTCCTTCCTTCCTTCCTTCCTT  653

seq1  CCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  703

seq1  TTTCTTTCTTTCATTCATTCAAAGTTACCTCACTCTTGAAAAGTTTATGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTCATTCATTCAAAGTTACCTCACTCTTGAAAAGTTTATGC  753

seq1  GAAATTAAGACCATTTTAATGAGCAGATGAATAGATGCTGGCATGTGCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTAAGACCATTTTAATGAGCAGATGAATAGATGCTGGCATGTGCTG  803

seq1  AAAGCAGAACATACACTTCATTGTTAAAGGTGTTCCCTGGGCTCTTTTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGAACATACACTTCATTGTTAAAGGTGTTCCCTGGGCTCTTTTTC  853

seq1  CATTTTCTATCATTCAGGATAGGCGGCACCTGCGCACATGAGTTCGACCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCTATCATTCAGGATAGGCGGCACCTGCGCACATGAGTTCGACCC  903

seq1  AGTCTGCAACCTCACATATGGAGAATTC  1028
      ||||||||||||||||||||||||||||
seq2  AGTCTGCAACCTCACATATGGAGAATTC  931


seq1: chr18_58923579_58924698
seq2: B6Ng01-192N07.g_66_1180

seq1  GAATTCATACACTATGGCATATTGTCCATCCATAAAAGTTTAGAACCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATACACTATGGCATATTGTCCATCCATAAAAGTTTAGAACCCCA  50

seq1  CAGAAACGTCGCTGAAACTCATGGTCATTATGTTAAAGGGAAAAGACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACGTCGCTGAAACTCATGGTCATTATGTTAAAGGGAAAAGACACA  100

seq1  GACGGATGAGGACAAAACATTTTTCTCTTTCAATTGTGAAAAATGTAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGATGAGGACAAAACATTTTTCTCTTTCAATTGTGAAAAATGTAAGT  150

seq1  TGATCTCATAGAGTAAAATGCAACAGTGCTCACTTGCACGAGGGAAGGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTCATAGAGTAAAATGCAACAGTGCTCACTTGCACGAGGGAAGGCC  200

seq1  AGGAAGAAGAGTATAGAAGGAAGTTCAATATAAACTGCGACACAAGGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAAGAGTATAGAAGGAAGTTCAATATAAACTGCGACACAAGGTTG  250

seq1  AGTAGAGTATCGCTTTTTCTATAGTACTATGGGGGTAGCTATTACCTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAGTATCGCTTTTTCTATAGTACTATGGGGGTAGCTATTACCTAAA  300

seq1  GCTATATGTATTTCAAAATATCTAGAGAACTGAACATTCTCAACATGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATATGTATTTCAAAATATCTAGAGAACTGAACATTCTCAACATGTAG  350

seq1  CAGTGATTATTTTTTGAAGAGATGGTAATGCTCATTGTAAGGCTATGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGATTATTTTTTGAAGAGATGGTAATGCTCATTGTAAGGCTATGATT  400

seq1  ACTACACATCATGCACATTCATTAAAGTGTCATGACCCACGCATAAAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACACATCATGCACATTCATTAAAGTGTCATGACCCACGCATAAAGAT  450

seq1  GTATGGATGCTTCGGTAAAATAAGTAGCTCAACCCCATTTCGTTCAATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGATGCTTCGGTAAAATAAGTAGCTCAACCCCATTTCGTTCAATCA  500

seq1  AGGAATAAGAACCTCTCACCTCGCTGGGCGTGGTGGCGTGCACCTTTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATAAGAACCTCTCACCTCGCTGGGCGTGGTGGCGTGCACCTTTAAT  550

seq1  CCCAGCATTCAGGAGGCAGAGGTAGGCGGATCTCTGAGTTCGAGGCCAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCATTCAGGAGGCAGAGGTAGGCGGATCTCTGAGTTCGAGGCCAAC  600

seq1  CTGGTCTTCCCCAGTTTCAACTCCTGCAGCAGTCAAGTTTACCTCTGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCTTCCCCAGTTTCAACTCCTGCAGCAGTCAAGTTTACCTCTGTGG  650

seq1  TTGTTTTAACTCTCAGTTGTCAGACTCAACACACATCACTTAACGATCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTAACTCTCAGTTGTCAGACTCAACACACATCACTTAACGATCTC  700

seq1  CTAAGAGAGCAGGAAGGACTTTTATCAATTCATTTCTCAGTGTGTCCTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAGAGCAGGAAGGACTTTTATCAATTCATTTCTCAGTGTGTCCTAG  750

seq1  ATGATGACACTGTCTCAATTTCTAAAATTCTGGGTTTTTTTTTGTTTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGACACTGTCTCAATTTCTAAAATTCTGGGTTTTTTTTTGTTTGTT  800

seq1  TTTCTTCTGTAGTTTTCTTTGGGAAACTCAGGGACAGATAATTTGTATTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCTGTAGTTTTCTTTGGGAAACTCAGGGACAGATAATTTGTATTG  850

seq1  CTTTAAGCTGTTTTAAGATTTTCCTGTTTAGAGAACCTAATATTGAATCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAGCTGTTTTAAGATTTTCCTGTTTAGAGAACCTAATATTGAATCA  900

seq1  TTCTTCTTGCGGTGAATTTTAAAGTGTTTGTATAATTTACCCACTTTTCT  950
      |||||||||||||||||||||||||| |||||| ||||||||||||||||
seq2  TTCTTCTTGCGGTGAATTTTAAAGTG-TTGTAT-ATTTACCCACTTTTCT  948

seq1  CCCCAAAATGAGACATTGGTGTGTGGATGTTATGGG-CTCCCCTGGCCAT  999
      ||||||||||||||||||  |||||||||||||||| |||||||||||||
seq2  CCCCAAAATGAGACATTGTGGTGTGGATGTTATGGGCCTCCCCTGGCCAT  998

seq1  ACCT-GTGGATAATTACTAGTTTCTTTGGCAATTTCCTCCCTACCTTGTT  1048
      |||| |||||  ||||||||||||||||||| |||||| |||||| ||||
seq2  ACCTGGTGGAATATTACTAGTTTCTTTGGCATTTTCCTTCCTACC-TGTT  1047

seq1  ACTACTGCATTTTCTAATGTAACCTGTAGACATGTGGTTCTGAAATACAC  1098
      ||||||||| ||||| ||||||||||||||||||| | | || |||||||
seq2  ACTACTGCA-TTTCT-ATGTAACCTGTAGACATGTTGGTTTG-AATACAC  1094

seq1  TAACATGGCTCATGGGATTAGT  1120
      |||||| |||||  ||||||||
seq2  TAACAT-GCTCAATGGATTAGT  1115


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