BAC Information

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BAC

Clone NameB6Ng01-192P10
Chromosome18 (Build37)
Map Location 41,198,396 - 41,355,513
singlet/doubletdoublet
Overlap genenone
Upstream geneYipf5, Kctd16, EG225416
Downstream geneLOC677182, LOC100041988, LOC100041997, Prelid2, Gm851, Sh3rf2, EG435561, Plac8l1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192P10.bB6Ng01-192P10.g
ACCGA016066GA016067
length1,1271,095
definitionB6Ng01-192P10.b B6Ng01-192P10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(41,354,388 - 41,355,513)(41,198,396 - 41,199,493)
sequence
gaattccttccccaacttccttcatgatacagtggaagctataagacaac
gaggagtgtttggaatcaggcttatgattttcatagtactcttgagataa
taaatgatctgttcatttatgggtgaaggtaaatacacaaacacgagaga
gagagagacagagagagacagagagacagagagagacagagagacagaga
cagagatgagagaatgcagactatatttgatgagagaaaaactattattc
ctattagtaagaaagtaggtgtattgtgtgaaatttgcatgttctctggg
gttgaaaaactatgagagcacacattgtaaattagttcatttggaaaagc
atagtctccacacttttccattccatgtgaaacgttacgtgactaaaaac
atagctaaagttgtagttcgatcaatttgcctcaagtattggacctagtg
cttacttagccattcagtcttggtcgccataggcagcttactgtgatttc
caagtcttgtaagctttgtacacaaaacagaaataaaacccatgattctt
aggagtttggacaaaggtagaaagaattgtataaatgatgtatgacaggc
atattagaagtgttctgcaaacaagaaatcttactcttgatgccaatatt
tgtgaactgaaccataaatgaaaattgaaatgcttgacatgaaattctta
ttcatcggtttagtaatcctacaggtcaggaaaataaaatgtgaaaatag
tggaatagtggagatttttgtttttattattccatgggtcactaaaagca
aacactgacctatgtcagcattttaaatgttttaaaatccccaaataaaa
acaaccactttcaccatcaataaaagaaccagaaaataattttaccaatg
gtttgcactgtgtggtctactttgtgcacagttgttgcatgtgtagttgc
ccggctggtacaatggtgaggtctcccaccccttttcaggactttatttt
ggatgggatcgagccttcagctaggtaatacctttggggtatttgtattc
tccattacctccattcaatggaggatccacctaatggttgagttacaagt
tattgtgtcatcttttgagagacatta
gaattcagaatctgagccattctctccgtgatgctagtgcaccatatagg
atgattaaaagattgtgctaacaggcttatcaaagaaaaatacagcttag
tccacattacatttaaattttagttaaacaacacatactttttagcatgg
aaatatttattgcagtgataacagtagcagtaagtgagaaagctaaataa
aagtcatcactgagttttatatctaagttagatctaaaatcggtcagact
atttctagtcttaaaaggaatcagatgtgcaatggaattctgtctctgca
gctgactagctatattgctctatataaacatcctaaattctttgactttt
agctttaatacccataatatagatacaataatagctctacctcacagggc
aattgtgaagattaaatgctcacaatgtttatatcatgtaaaaagtttaa
tttgcagcttggtgtactgtaaaatttcattaaacacaaagtacagaggt
gttagctacttaatcaagtccttaaaactgggcaatacaacttagttttc
tttatatttccttctcactgcaatgtgaacaaaaaattaacagtaaatga
aacttctggctggtgctacgttgtttgttctttgcccagcatttgctcag
cagtcaattcatacacaggatgcttgaccaggtgctggctgtagagatag
aaagtgtctatctttgccctctttcactcatggatatgaaacatataact
tgtgtctatggcatttacaaatcaattggaagaagcattagttttctcaa
tgatatggagtttttctagggatgtctgaggctgtaggtccaattcccag
atctgggggaaaatcataaacatcaaaatatgagaatgagttcatataaa
cattttcctgatgctccatctccaaagttaattgaaacttcttaaagaac
agttcctcctcattgtctttttacactattatggaaatgctttagtatta
gatgtccataaacatagataagaacaagagggatccaaggatagatagta
ccagatgtaccttttataccgtatgggcaattatgctttttgctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_41354388_41355513
seq2: B6Ng01-192P10.b_44_1170 (reverse)

seq1  TAATGTTCTTCAAAAATGGACACATTAACTTGTAACTTCACCCATTAAGG  50
      ||||||   ||||||   |||||| ||||||||||| ||| ||||| |||
seq2  TAATGTCTCTCAAAAGATGACACAATAACTTGTAAC-TCAACCATT-AGG  48

seq1  TGATCCCTCCATTGAAT-GAGTTATTGGAGAAATAC-AATACCCCAAAAG  98
      ||   |||||||||||| ||| || ||||| ||||| ||||||||||| |
seq2  TGGATCCTCCATTGAATGGAGGTAATGGAG-AATACAAATACCCCAAAGG  97

seq1  TATTTAACTAGCTGAAGCCTCGATCCCATCC-AAATAAAGT-CTGAAAAG  146
      || ||| |||||||||| ||||||||||||| ||||||||| ||||||||
seq2  TA-TTACCTAGCTGAAGGCTCGATCCCATCCAAAATAAAGTCCTGAAAAG  146

seq1  GGGTGGGAGACCTCACCATTGTACCAGCCGGGC-ACTACACATGC-ACAA  194
      ||||||||||||||||||||||||||||||||| ||||||||||| ||||
seq2  GGGTGGGAGACCTCACCATTGTACCAGCCGGGCAACTACACATGCAACAA  196

seq1  CTGTGCACAAAGTAGACCACACAGTGCAAACCATTGGTAAAATTATTTTC  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCACAAAGTAGACCACACAGTGCAAACCATTGGTAAAATTATTTTC  246

seq1  TTGTTTCTTTTATTGATGGTG-AAGTGGTTGTTTTTATTTGGGGATTTTT  293
       || ||||||||||||||||| ||||||||||||||||||||||| ||||
seq2  -TGGTTCTTTTATTGATGGTGAAAGTGGTTGTTTTTATTTGGGGA-TTTT  294

seq1  AAAACATTTAAAATGCTGACATAGGTCAGTGTTTGCTTTTAGTGACCCAT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATTTAAAATGCTGACATAGGTCAGTGTTTGCTTTTAGTGACCCAT  344

seq1  GGAATAATAAAAACAAAAATCTCCACTATTCCACTATTTTCACATTTTAT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAATAAAAACAAAAATCTCCACTATTCCACTATTTTCACATTTTAT  394

seq1  TTTCCTGACCTGTAGGATTACTAAACCGATGAATAAGAATTTCATGTCAA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGACCTGTAGGATTACTAAACCGATGAATAAGAATTTCATGTCAA  444

seq1  GCATTTCAATTTTCATTTATGGTTCAGTTCACAAATATTGGCATCAAGAG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCAATTTTCATTTATGGTTCAGTTCACAAATATTGGCATCAAGAG  494

seq1  TAAGATTTCTTGTTTGCAGAACACTTCTAATATGCCTGTCATACATCATT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATTTCTTGTTTGCAGAACACTTCTAATATGCCTGTCATACATCATT  544

seq1  TATACAATTCTTTCTACCTTTGTCCAAACTCCTAAGAATCATGGGTTTTA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAATTCTTTCTACCTTTGTCCAAACTCCTAAGAATCATGGGTTTTA  594

seq1  TTTCTGTTTTGTGTACAAAGCTTACAAGACTTGGAAATCACAGTAAGCTG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTTTTGTGTACAAAGCTTACAAGACTTGGAAATCACAGTAAGCTG  644

seq1  CCTATGGCGACCAAGACTGAATGGCTAAGTAAGCACTAGGTCCAATACTT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGGCGACCAAGACTGAATGGCTAAGTAAGCACTAGGTCCAATACTT  694

seq1  GAGGCAAATTGATCGAACTACAACTTTAGCTATGTTTTTAGTCACGTAAC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAAATTGATCGAACTACAACTTTAGCTATGTTTTTAGTCACGTAAC  744

seq1  GTTTCACATGGAATGGAAAAGTGTGGAGACTATGCTTTTCCAAATGAACT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCACATGGAATGGAAAAGTGTGGAGACTATGCTTTTCCAAATGAACT  794

seq1  AATTTACAATGTGTGCTCTCATAGTTTTTCAACCCCAGAGAACATGCAAA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTACAATGTGTGCTCTCATAGTTTTTCAACCCCAGAGAACATGCAAA  844

seq1  TTTCACACAATACACCTACTTTCTTACTAATAGGAATAATAGTTTTTCTC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACACAATACACCTACTTTCTTACTAATAGGAATAATAGTTTTTCTC  894

seq1  TCATCAAATATAGTCTGCATTCTCTCATCTCTGTCTCTGTCTCTCTGTCT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAAATATAGTCTGCATTCTCTCATCTCTGTCTCTGTCTCTCTGTCT  944

seq1  CTCTCTGTCTCTCTGTCTCTCTCTGTCTCTCTCTCTCTCGTGTTTGTGTA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGTCTCTCTGTCTCTCTCTGTCTCTCTCTCTCTCGTGTTTGTGTA  994

seq1  TTTACCTTCACCCATAAATGAACAGATCATTTATTATCTCAAGAGTACTA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTTCACCCATAAATGAACAGATCATTTATTATCTCAAGAGTACTA  1044

seq1  TGAAAATCATAAGCCTGATTCCAAACACTCCTCGTTGTCTTATAGCTTCC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATCATAAGCCTGATTCCAAACACTCCTCGTTGTCTTATAGCTTCC  1094

seq1  ACTGTATCATGAAGGAAGTTGGGGAAGGAATTC  1126
      |||||||||||||||||||||||||||||||||
seq2  ACTGTATCATGAAGGAAGTTGGGGAAGGAATTC  1127

seq1: chr18_41198396_41199493
seq2: B6Ng01-192P10.g_65_1159

seq1  GAATTCAGAATCTGAGCCATTCTCTCCGTGATGCTAGTGCACCATATAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAATCTGAGCCATTCTCTCCGTGATGCTAGTGCACCATATAGG  50

seq1  ATGATTAAAAGATTGTGCTAACAGGCTTATCAAAGAAAAATACAGCTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTAAAAGATTGTGCTAACAGGCTTATCAAAGAAAAATACAGCTTAG  100

seq1  TCCACATTACATTTAAATTTTAGTTAAACAACACATACTTTTTAGCATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATTACATTTAAATTTTAGTTAAACAACACATACTTTTTAGCATGG  150

seq1  AAATATTTATTGCAGTGATAACAGTAGCAGTAAGTGAGAAAGCTAAATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTATTGCAGTGATAACAGTAGCAGTAAGTGAGAAAGCTAAATAA  200

seq1  AAGTCATCACTGAGTTTTATATCTAAGTTAGATCTAAAATCGGTCAGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCATCACTGAGTTTTATATCTAAGTTAGATCTAAAATCGGTCAGACT  250

seq1  ATTTCTAGTCTTAAAAGGAATCAGATGTGCAATGGAATTCTGTCTCTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTAGTCTTAAAAGGAATCAGATGTGCAATGGAATTCTGTCTCTGCA  300

seq1  GCTGACTAGCTATATTGCTCTATATAAACATCCTAAATTCTTTGACTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACTAGCTATATTGCTCTATATAAACATCCTAAATTCTTTGACTTTT  350

seq1  AGCTTTAATACCCATAATATAGATACAATAATAGCTCTACCTCACAGGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTAATACCCATAATATAGATACAATAATAGCTCTACCTCACAGGGC  400

seq1  AATTGTGAAGATTAAATGCTCACAATGTTTATATCATGTAAAAAGTTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTGAAGATTAAATGCTCACAATGTTTATATCATGTAAAAAGTTTAA  450

seq1  TTTGCAGCTTGGTGTACTGTAAAATTTCATTAAACACAAAGTACAGAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAGCTTGGTGTACTGTAAAATTTCATTAAACACAAAGTACAGAGGT  500

seq1  GTTAGCTACTTAATCAAGTCCTTAAAACTGGGCAATACAACTTAGTTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGCTACTTAATCAAGTCCTTAAAACTGGGCAATACAACTTAGTTTTC  550

seq1  TTTATATTTCCTTCTCACTGCAATGTGAACAAAAAATTAACAGTAAATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATTTCCTTCTCACTGCAATGTGAACAAAAAATTAACAGTAAATGA  600

seq1  AACTTCTGGCTGGTGCTACGTTGTTTGTTCTTTGCCCAGCATTTGCTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCTGGCTGGTGCTACGTTGTTTGTTCTTTGCCCAGCATTTGCTCAG  650

seq1  CAGTCAATTCATACACAGGATGCTTGACCAGGTGCTGGCTGTAGAGATAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAATTCATACACAGGATGCTTGACCAGGTGCTGGCTGTAGAGATAG  700

seq1  AAAGTGTCTATCTTTGCCCTCTTTCACTCATGGATATGAAACATATAACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGTCTATCTTTGCCCTCTTTCACTCATGGATATGAAACATATAACT  750

seq1  TGTGTCTATGGCATTTACAAATCAATTGGAAGAAGCATTAGTTTTCTCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTATGGCATTTACAAATCAATTGGAAGAAGCATTAGTTTTCTCAA  800

seq1  TGATATGGAGTTTTTCTA-GGATGTCTGAGGCTGTAGGTCCAATTCCCAG  849
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TGATATGGAGTTTTTCTAGGGATGTCTGAGGCTGTAGGTCCAATTCCCAG  850

seq1  ATCT-GGGGAAAATCATAAAACATCAAAATATGAGAATGAGTTCATATAA  898
      |||| |||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATCTGGGGGAAAATCAT-AAACATCAAAATATGAGAATGAGTTCATATAA  899

seq1  ACA-TTTCCTGATGCTCCATCTCCAAAGTTAAATTGAAAACTTCTTAAAG  947
      ||| |||||||||||||||||||||||||| ||||| |||||||||||||
seq2  ACATTTTCCTGATGCTCCATCTCCAAAGTT-AATTG-AAACTTCTTAAAG  947

seq1  AACAGTTCCTCCTCATTGTC-TTTTACACTA-TATGG-AATGCTTTAGTA  994
      |||||||||||||||||||| |||||||||| ||||| ||||||||||||
seq2  AACAGTTCCTCCTCATTGTCTTTTTACACTATTATGGAAATGCTTTAGTA  997

seq1  TTAGATGTCCAATAAACATTAGATAAG-ACAGAAGGGAT-CAAAGATAGG  1042
      |||||||||| ||||||| |||||||| |||  |||||| ||| ||||| 
seq2  TTAGATGTCC-ATAAACA-TAGATAAGAACAAGAGGGATCCAAGGATAG-  1044

seq1  AATAGTTACCAGGATGTACCTTTTATACCGTATGGGAAAATTTATGCTTT  1092
       |||| ||||| |||||||||||||||||||||||| ||  |||||||||
seq2  -ATAG-TACCA-GATGTACCTTTTATACCGTATGGGCAA--TTATGCTTT  1089

seq1  TTGCTC  1098
      ||||||
seq2  TTGCTC  1095