BAC Information

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BAC

Clone NameB6Ng01-193M15
Chromosome18 (Build37)
Map Location 21,825,543 - 21,938,361
singlet/doubletdoublet
Overlap genenone
Upstream geneTtr, LOC100040823, B4galt6, D030074E01Rik, Rnf125, Rnf138, Mep1b, EG622978, Gm944, LOC665722, LOC225264, Klhl14
Downstream gene4921528I01Rik, LOC546708, LOC100040547, Asxl3, Nol4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193M15.bB6Ng01-193M15.g
ACCGA016660GA016661
length1,123851
definitionB6Ng01-193M15.b B6Ng01-193M15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,825,543 - 21,826,676)(21,937,699 - 21,938,361)
sequence
gaattcaatgccaggtgccattctcagtaacgccccactctcttgagaca
gggcctctcactgagtctggagtttactgattcagctagactgtgaacga
catgggtctgttcatctcagctgggattacagatgccagctattgcatgc
agttttatatgtggcttcttggggaactaacctcaggccctcatgtttgt
tcagcaagtactttcaaacttagctgtatcctctgatcctgtgtttcttc
gattcctttaggttttgttttgttttaatcccctctatgttcagatctga
tgctgtgaagtccctgtatttgtgcagggatgacacgtttgaaacctatc
atcatgaacagatggggtgatgcataaatacggtgagctgaagatcttcg
ttcctgtccttgtgtttactccattatttctgctatttattagaggtctt
tccctcttttcttattttcctaattctgctataggttcagctacctgtac
attcactgctatacttcctcatttttgtcaaacgttcacttgaccatgtg
aattcattatgaaattgtgcaacccaacatctagtatgacattggttata
ttagaatagagatgctcaaagtgttttctaacactggacaattgtaatgc
catcatcccaaaacctgcagaaatgcagattcttagactctcttccacat
ctactaaaatagagactctggaggagctgaggaagtgcaacagtttatgg
ctctaaagccttctaggtaattatgatggcggcttacatctgagaaccaa
tgttctagaagaatctagccatatcttcacatcagcacactgagaatgct
taaaagttaatattccttaatgtactcacccaagtgaaatactagagaga
tttccagatgttaacaattgaacagttagttatattatttttatctcatg
catctttagtctgtagataactgggtcaggtaatatgactcagtcttagc
attataatcatacctgatttcactctttgagtgctgactaaaaactgcaa
tagaagtcagtatcgcatctagtgatgcaagctgattggtacccgcagtc
cacaacactgcctacatcatgct
gaattctctttatttttttttttttttagttatacaggaaaaccatgaat
ttcttatcactgtaacttgctcatactgccattccactatcgcctcttca
ccattgctggtctcatatatgtgagatatcatgtatgttgtacatgagac
aaagtagctgtacatttaaacctaaagtctgctatgtgagaaaacataca
atgttttctttctgaatctggattatttcatttaacaaaatgatctctag
ctccttcatgttactgcaaatggcctgttttcacttttccttatggctga
gtccaacactgtatattgggcacattttttatttgctgatggtcattcaa
agttagtgtcatatgccttggctactgtgaagagagcagtgatcaacaag
gacttgcagagttctctacagtgatggagagcccttagggcatatactcc
agagtgctgtacctcgatcaaatgagagctttgttttcagttcttttgaa
gacccttcatcctgatttccatactgtctgcacttgggtacaaagggttg
cttctccccacccccagcccatccacatcttcactgttttgtttgcttga
taatagccattcagacatgagtgagatggggttatgcagttttagttttt
atttccttgatggctaaggatgttgaacatttattcttcaattatttatc
ttgtgtgtgtgtgtgtgtgtgtgtgtgcgcgtgcgcgcgcgcgcgcgtgt
gcgtgtgtgtgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgcacac
gtgcatttgtgttttttggaaaaaagaggaatcagacccccctggagtta
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_21825543_21826676
seq2: B6Ng01-193M15.b_44_1166

seq1  GAATTCAATGCCAGGTGCCATTCTCAGTAACGCCCCACTCTCTTGAGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGCCAGGTGCCATTCTCAGTAACGCCCCACTCTCTTGAGACA  50

seq1  GGGCCTCTCACTGAGTCTGGAGTTTACTGATTCAGCTAGACTGTGAACGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTCTCACTGAGTCTGGAGTTTACTGATTCAGCTAGACTGTGAACGA  100

seq1  CATGGGTCTGTTCATCTCAGCTGGGATTACAGATGCCAGCTATTGCATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGTCTGTTCATCTCAGCTGGGATTACAGATGCCAGCTATTGCATGC  150

seq1  AGTTTTATATGTGGCTTCTTGGGGAACTAACCTCAGGCCCTCATGTTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTATATGTGGCTTCTTGGGGAACTAACCTCAGGCCCTCATGTTTGT  200

seq1  TCAGCAAGTACTTTCAAACTTAGCTGTATCCTCTGATCCTGTGTTTCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAAGTACTTTCAAACTTAGCTGTATCCTCTGATCCTGTGTTTCTTC  250

seq1  GATTCCTTTAGGTTTTGTTTTGTTTTAATCCCCTCTATGTTCAGATCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCTTTAGGTTTTGTTTTGTTTTAATCCCCTCTATGTTCAGATCTGA  300

seq1  TGCTGTGAAGTCCCTGTATTTGTGCAGGGATGACACGTTTGAAACCTATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGAAGTCCCTGTATTTGTGCAGGGATGACACGTTTGAAACCTATC  350

seq1  ATCATGAACAGATGGGGTGATGCATAAATACGGTGAGCTGAAGATCTTCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGAACAGATGGGGTGATGCATAAATACGGTGAGCTGAAGATCTTCG  400

seq1  TTCCTGTCCTTGTGTTTACTCCATTATTTCTGCTATTTATTAGAGGTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTCCTTGTGTTTACTCCATTATTTCTGCTATTTATTAGAGGTCTT  450

seq1  TCCCTCTTTTCTTATTTTCCTAATTCTGCTATAGGTTCAGCTACCTGTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTTTTCTTATTTTCCTAATTCTGCTATAGGTTCAGCTACCTGTAC  500

seq1  ATTCACTGCTATACTTCCTCATTTTTGTCAAACGTTCACTTGACCATGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACTGCTATACTTCCTCATTTTTGTCAAACGTTCACTTGACCATGTG  550

seq1  AATTCATTATGAAATTGTGCAACCCAACATCTAGTATGACATTGGTTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATTATGAAATTGTGCAACCCAACATCTAGTATGACATTGGTTATA  600

seq1  TTAGAATAGAGATGCTCAAAGTGTTTTCTAACACTGGACAATTGTAATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATAGAGATGCTCAAAGTGTTTTCTAACACTGGACAATTGTAATGC  650

seq1  CATCATCCCAAAACCTGCAGAAATGCAGATTCTTAGACTCTCTTCCACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATCCCAAAACCTGCAGAAATGCAGATTCTTAGACTCTCTTCCACAT  700

seq1  CTACTAAAATAGAGACTCTGGAGGAGCTGAGGAAGTGCAACAGTTTATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTAAAATAGAGACTCTGGAGGAGCTGAGGAAGTGCAACAGTTTATGG  750

seq1  CTCTAAAGCCTTCTAGGTAATTATGATGGCGGCTTACATCTGAGAACCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAAGCCTTCTAGGTAATTATGATGGCGGCTTACATCTGAGAACCAA  800

seq1  TGTTCTAGAAGAATCTAGCCATATCTTCACATCAGCACACTGAGAATGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTAGAAGAATCTAGCCATATCTTCACATCAGCACACTGAGAATGCT  850

seq1  TAAAAGTTAATATTCCTTAATGTACTCACCCAAGTGAAATACTAGAGAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTTAATATTCCTTAATGTACTCACCCAAGTGAAATACTAGAGAGA  900

seq1  TTTCCAGATGTTAACAATTGAACAGTTAGTTATATTATTTTTATCTCATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGATGTTAACAATTGAACAGTTAGTTATATTATTTTTATCTCATG  950

seq1  CATCTTTAGTCTGTAGATAACTGGGTCAGGTAATATGACTCAGTCTTAGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTAGTCTGTAGATAACTGGGTCAGGTAATATGACTCAGTCTTAGC  1000

seq1  ATTAATAATCATACCTGATTTCACTCTTTGAGTTGCTGACATAAAAAACC  1050
      ||| |||||||||||||||||||||||||||| ||||||| ||||||  |
seq2  ATT-ATAATCATACCTGATTTCACTCTTTGAG-TGCTGAC-TAAAAA--C  1045

seq1  TGCAATAG-AGTCAAGTATCGCATCTAAGTGAATGCAAGCTGATGGGAAC  1099
      |||||||| |||| |||||||||||| |||| |||||||||||| || ||
seq2  TGCAATAGAAGTC-AGTATCGCATCT-AGTG-ATGCAAGCTGATTGGTAC  1092

seq1  AGGGCAGTTCACACAAACACTTGCTACATCATGCT  1134
         ||||| |||   ||||||  ||||||||||||
seq2  -CCGCAGTCCAC---AACACTGCCTACATCATGCT  1123

seq1: chr18_21937699_21938361
seq2: B6Ng01-193M15.g_250_913 (reverse)

seq1  GTAACTCCAGGGGAGTCTGATTCCTCTGTTTTCC-ACAAACACAAATGCA  49
      ||||||||||||| ||||||||||||| |||||| | |||||||||||||
seq2  GTAACTCCAGGGGGGTCTGATTCCTCTTTTTTCCAAAAAACACAAATGCA  50

seq1  CGTGTGCACACACACACACACACACACACACACGCACACACACACACACG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTGCACACACACACACACACACACACACACGCACACACACACACACG  100

seq1  CACACGCGCGCGCGCGCGCACGCGCACACACACACACACACACACACACA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACGCGCGCGCGCGCGCACGCGCACACACACACACACACACACACACA  150

seq1  AGATAAATAATTGAAGAATAAATGTTCAACATCCTTAGCCATCAAGGAAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAATAATTGAAGAATAAATGTTCAACATCCTTAGCCATCAAGGAAA  200

seq1  TAAAAACTAAAACTGCATAACCCCATCTCACTCATGTCTGAATGGCTATT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACTAAAACTGCATAACCCCATCTCACTCATGTCTGAATGGCTATT  250

seq1  ATCAAGCAAACAAAACAGTGAAGATGTGGATGGGCTGGGGGTGGGGAGAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGCAAACAAAACAGTGAAGATGTGGATGGGCTGGGGGTGGGGAGAA  300

seq1  GCAACCCTTTGTACCCAAGTGCAGACAGTATGGAAATCAGGATGAAGGGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCCTTTGTACCCAAGTGCAGACAGTATGGAAATCAGGATGAAGGGT  350

seq1  CTTCAAAAGAACTGAAAACAAAGCTCTCATTTGATCGAGGTACAGCACTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAAAGAACTGAAAACAAAGCTCTCATTTGATCGAGGTACAGCACTC  400

seq1  TGGAGTATATGCCCTAAGGGCTCTCCATCACTGTAGAGAACTCTGCAAGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTATATGCCCTAAGGGCTCTCCATCACTGTAGAGAACTCTGCAAGT  450

seq1  CCTTGTTGATCACTGCTCTCTTCACAGTAGCCAAGGCATATGACACTAAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTTGATCACTGCTCTCTTCACAGTAGCCAAGGCATATGACACTAAC  500

seq1  TTTGAATGACCATCAGCAAATAAAAAATGTGCCCAATATACAGTGTTGGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATGACCATCAGCAAATAAAAAATGTGCCCAATATACAGTGTTGGA  550

seq1  CTCAGCCATAAGGAAAAGTGAAAACAGGCCATTTGCAGTAACATGAAGGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCCATAAGGAAAAGTGAAAACAGGCCATTTGCAGTAACATGAAGGA  600

seq1  GCTAGAGATCATTTTGTTAAATGAAATAATCCAGATTCAGAAAGAAAACA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAGATCATTTTGTTAAATGAAATAATCCAGATTCAGAAAGAAAACA  650

seq1  TTGTATGTTTTCTC  663
      ||||||||||||||
seq2  TTGTATGTTTTCTC  664