BAC Information

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BAC

Clone NameB6Ng01-194B09
Chromosome18 (Build37)
Map Location 17,928,771 - 17,929,799
singlet/doubletsinglet
Overlap genenone
Upstream geneCdh2, LOC665519, 1700001G01Rik, 4921533I20Rik
Downstream geneLOC100040647
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194B09.bB6Ng01-194B09.g
ACCGA016877GA016878
length9141,028
definitionB6Ng01-194B09.b B6Ng01-194B09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttattttctccatctatgataattgagagttttgttgggtata
gcagcctgggctggagtttgtgtcctcttagggtttgtatgatatctgtc
caggatcttctggctttcatattctctggtgtaagtctgatataattcta
ataggtttgcctttatatgttgcctgacctttttcccttatttaaaaaaa
aatgtctatctttgtatagtgcatttggtgttttgattattatgtattgt
gagaaatttcttttctgatccagtctatttgaagttctgtgggtttcttg
tatgttcatggacatctctttctttaggttagggaagttgtttctataat
tttgttgatgatatttactgcccttttaaggtgggaatcgtcactctttt
ctatacctattatccttaggtttgattctctcattgtgtcctggatttcc
ttgatgttttgagttaggatctttttgcactttgcattttctttgattgc
tgtatcaatgttttctatggaatcttctgcacctgcaattctatcttcca
tctcttgtattatgttggtgatgcttacatctatggctcttgcttctttc
ctaggattcttatctccagagttgtctcccttttgatttttttattgttt
ctacttccatttttagattgtggatggttttgttcaattccttcacctgt
ttggttatgttttcctgtaattctttaagggatttttgtgtttcttcttt
aagggcttctacctgtttttgtgtgttctcctgtatttcttttaggaaat
tattaatgtcctttcttaaaatcctctatcagcatcatgagatacgattt
taaatctaaattcttctttttctgctttgtggggtatcaggtctcgttgg
tttgtagaaggact
gaattccaatggatgaatagctcctacctgaaacagtgtgaatggctttc
aaactttcttttttctttttttttttttctgaagaaaaaagtaagagcct
aggccactaggctagaaaaatgtttaaaaagaaagggtgtggagagataa
tcagtcagctaacttctttcacctcataagagaaaatgatgaaatgtatt
aaactcaatccccagaaccatattacccattctcagaaagtcaatataac
aaagcaaatggattttctagtctgtgtgtgtgtgcatgtgtagttcagtc
tacagaataaattgaaggagaaataaaaggagttatttttctgtcgcatc
gagtcattgatggtttgaatttggtccttaaagtaggcagacttttttta
atcagaaaaacatgtgcctaagtaacctagtgatttttgtcctccgaaaa
gagtcatcacctgatttccagcctaggtctttctctatgtgcttcagtct
ggataaacatagtcagtataactttcaatcagtgagagttcctaacaagc
aaaaccacgtgaagatctttgcccattgcagcccgagatgttacagaggg
ttttctccttgtctgatcttccttctaaagaacaactatgcttgaactat
gcagaagcgtagagggagaagcagagaaatgagagaagccagcaagcaga
tggcttaattgtctagttcattccatccatcactgaggcatgtgctattt
tggcattctaggaaacattatatccaggaacagcaggagtgactgttaga
gccaaggtctagatttctatggtagtgccattgactggcaacactgaata
gcaactgcatagatgaaactaaacagtagttggtaccacagataattgta
ttaaatgcctgccatcataagcctaatggtattaacttttaggtagctac
cagcataatcctttactgtctttacaatcattgaaattatggaaaatatc
ttgtaaaggtgtgaacaatattaaacca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_17928771_17929799
seq2: B6Ng01-194B09.g_64_1091

seq1  GAATTCCAATGGATGAATAGCTCCTACCTGAAACAGTGTGAATGGCTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATGGATGAATAGCTCCTACCTGAAACAGTGTGAATGGCTTTC  50

seq1  AAACTTTCTTTTTTCTTTTTTTTTTTTTCTGAAGAAAAAAGTAAGAGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTCTTTTTTCTTTTTTTTTTTTTCTGAAGAAAAAAGTAAGAGCCT  100

seq1  AGGCCACTAGGCTAGAAAAATGTTTAAAAAGAAAGGGTGTGGAGAGATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCACTAGGCTAGAAAAATGTTTAAAAAGAAAGGGTGTGGAGAGATAA  150

seq1  TCAGTCAGCTAACTTCTTTCACCTCATAAGAGAAAATGATGAAATGTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCAGCTAACTTCTTTCACCTCATAAGAGAAAATGATGAAATGTATT  200

seq1  AAACTCAATCCCCAGAACCATATTACCCATTCTCAGAAAGTCAATATAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCAATCCCCAGAACCATATTACCCATTCTCAGAAAGTCAATATAAC  250

seq1  AAAGCAAATGGATTTTCTAGTCTGTGTGTGTGTGCATGTGTAGTTCAGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAATGGATTTTCTAGTCTGTGTGTGTGTGCATGTGTAGTTCAGTC  300

seq1  TACAGAATAAATTGAAGGAGAAATAAAAGGAGTTATTTTTCTGTCGCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAATAAATTGAAGGAGAAATAAAAGGAGTTATTTTTCTGTCGCATC  350

seq1  GAGTCATTGATGGTTTGAATTTGGTCCTTAAAGTAGGCAGACTTTTTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCATTGATGGTTTGAATTTGGTCCTTAAAGTAGGCAGACTTTTTTTA  400

seq1  ATCAGAAAAACATGTGCCTAAGTAACCTAGTGATTTTTGTCCTCCGAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAAAAACATGTGCCTAAGTAACCTAGTGATTTTTGTCCTCCGAAAA  450

seq1  GAGTCATCACCTGATTTCCAGCCTAGGTCTTTCTCTATGTGCTTCAGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCATCACCTGATTTCCAGCCTAGGTCTTTCTCTATGTGCTTCAGTCT  500

seq1  GGATAAACATAGTCAGTATAACTTTCAATCAGTGAGAGTTCCTAACAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAACATAGTCAGTATAACTTTCAATCAGTGAGAGTTCCTAACAAGC  550

seq1  AAAACCACGTGAAGATCTTTGCCCATTGCAGCCCGAGATGTTACAGAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCACGTGAAGATCTTTGCCCATTGCAGCCCGAGATGTTACAGAGGG  600

seq1  TTTTCTCCTTGTCTGATCTTCCTTCTAAAGAACAACTATGCTTGAACTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCCTTGTCTGATCTTCCTTCTAAAGAACAACTATGCTTGAACTAT  650

seq1  GCAGAAGCGTAGAGGGAGAAGCAGAGAAATGAGAGAAGCCAGCAAGCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAGCGTAGAGGGAGAAGCAGAGAAATGAGAGAAGCCAGCAAGCAGA  700

seq1  TGGCTTAATTGTCTAGTTCATTCCATCCATCACTGAGGCATGTGCTATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTAATTGTCTAGTTCATTCCATCCATCACTGAGGCATGTGCTATTT  750

seq1  TGGCATTCTAGGAAACATTATATCCAGGAACAGCAGGAGTGACTGTTAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTCTAGGAAACATTATATCCAGGAACAGCAGGAGTGACTGTTAGA  800

seq1  GCCAAGGTCTAGATTTCTATGGTAGTGCCATTGACTGGCAACACTGAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGGTCTAGATTTCTATGGTAGTGCCATTGACTGGCAACACTGAATA  850

seq1  GCAACTGCATAGATGAAACTAAACAGTAGTTGGTACCACAGATAATTGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTGCATAGATGAAACTAAACAGTAGTTGGTACCACAGATAATTGTA  900

seq1  TTAAATGCCTGCCATCATAAGCCTAATGGTATTAACTTTTAGGTAGCTAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGCCTGCCATCATAAGCCTAATGGTATTAACTTTTAGGTAGCTAC  950

seq1  CAGCATAATCCTTTACTGTCTTTACAATCATTTGAAATTATGG-AAATAT  999
      |||||||||||||||||||||||||||||| |||||||||||| ||||||
seq2  CAGCATAATCCTTTACTGTCTTTACAATCA-TTGAAATTATGGAAAATAT  999

seq1  CTTGTAAAGTTGTTGAACATTATTAAACCA  1029
      ||||||||| || |||||| ||||||||||
seq2  CTTGTAAAGGTG-TGAACAATATTAAACCA  1028