BAC Information

Click to search

BAC

Clone NameB6Ng01-195I12
Chromosome18 (Build37)
Map Location 17,446,867 - 17,447,696
singlet/doubletsinglet
Overlap genenone
Upstream geneCdh2, LOC665519, 1700001G01Rik, 4921533I20Rik
Downstream geneLOC100040647
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195I12.bB6Ng01-195I12.g
ACCGA017926GA017927
length860967
definitionB6Ng01-195I12.b B6Ng01-195I12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtttagttctataccccattttttaagtttggttctttgtg
tttttggtggctagcttcttgggttctttatatattttgtatattagtcc
tctatcggatgtggagttagtgaagatttttattcccagtcggtaggttg
ctgatttgtcctattgacagtgtcctatgacttacagaagctttccagtt
tcatgaggtctcatttatcagttcttgatcttaaagcctgagccactaga
attctgtttaggacatttcccctgttccaatggtttcaaggttctttccc
actttctcttctattagatttagtggatctggtttaatgttgaggtcctt
gatccacttggattggagctttgtgcaaggtgtcaaatatggatctattt
tcatgtagaagagcctaaggaaaagaatgtccagtgacaggctcaaactg
gggatccagctcaagaggaggctccaaggcctgacactcttactcaggct
agagaatgctcacaaaaaagggcctttcataattgcctttcaaaagatcc
aacaagcagctgaaagagtcagatgcaggtatttacactcaaccaatgaa
caacagctgctgactcctgtggttgaattagggaaaggctggaagaagct
gaggaggagggtgaccctgtaggaagaccagcagtcttaattaacctgga
ccgctgagatctctcagacactggaccaggcaacatataccagctgatag
caggccctcaattcatatacagcatagggccgctgggtcttggttcagtc
agagaagattgaacctaacccttcaagagactggaggccccagggagtgg
gggaggtgtg
gaattccagagtgaaacaagtcagctagcttcgttttcaattgatggtgt
tgtatgtagaaatagcttgtttcagtgtttataacaggaaattatatttt
taagcatttaagcaacttgtgtgtttttttctttcatatttggcatgtat
tctgtttcaaacatctttttagagtaaaataattggacacactttatgat
atggaattctgagaatttcttgttaacgtaacttttatcctcctgtagta
attgtctgggaggcttactgcatccatctgctaaagtaggcctggtcctg
gaggcttctaacctgttgtgcttgattgtaagccccaaaagatcaccaag
gaactgattgcaattcatgtgaactagtgtctttttagacaagctccagc
ttgcactaaccctgacacaacaggactgaaaggtgaagaagccttgagcc
cagtttcaagcaagcatttataaaggtgagcaaacaagcaagggggtttc
ttgcctggaatacatctgatttggggactattatggaatttcattgtcct
taaaaataattggctggtgctgggagccaaaccataaacttaacttctgc
tttacttctggtcggtagttgttaggaagtgaagtgccaggatcaggcct
gttggagagtaaattggaaactactactaggcaaaggtttattgggggga
gtaacctggaaattggtgctaggtgccagcttgttggttaactcaaattc
atccttagttcagttctctaagatggagtctgaaccaagatctggtctct
cagcttccacacaatctaatctaggcctaggttttttttttttttcagcc
tcttagacttgttggtgaataagctcatcccttcctagttcttctgatct
ctggctggctgatcaaactcaactggtctggctcggactcctcccccaga
ctgaatcaatctgactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_17446867_17447696
seq2: B6Ng01-195I12.g_62_890

seq1  GAATTCCAGAGTGAAACAAGTCAGCTAGCTTCGTTTTCAATTGATGGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAGTGAAACAAGTCAGCTAGCTTCGTTTTCAATTGATGGTGT  50

seq1  TGTATGTAGAAATAGCTTGTTTCAGTGTTTATAACAGGAAATTATATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTAGAAATAGCTTGTTTCAGTGTTTATAACAGGAAATTATATTTT  100

seq1  TAAGCATTTAAGCAACTTGTGTGTTTTTTTCTTTCATATTTGGCATGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCATTTAAGCAACTTGTGTGTTTTTTTCTTTCATATTTGGCATGTAT  150

seq1  TCTGTTTCAAACATCTTTTTAGAGTAAAATAATTGGACACACTTTATGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTCAAACATCTTTTTAGAGTAAAATAATTGGACACACTTTATGAT  200

seq1  ATGGAATTCTGAGAATTTCTTGTTAACGTAACTTTTATCCTCCTGTAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAATTCTGAGAATTTCTTGTTAACGTAACTTTTATCCTCCTGTAGTA  250

seq1  ATTGTCTGGGAGGCTTACTGCATCCATCTGCTAAAGTAGGCCTGGTCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCTGGGAGGCTTACTGCATCCATCTGCTAAAGTAGGCCTGGTCCTG  300

seq1  GAGGCTTCTAACCTGTTGTGCTTGATTGTAAGCCCCAAAAGATCACCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTTCTAACCTGTTGTGCTTGATTGTAAGCCCCAAAAGATCACCAAG  350

seq1  GAACTGATTGCAATTCATGTGAACTAGTGTCTTTTTAGACAAGCTCCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGATTGCAATTCATGTGAACTAGTGTCTTTTTAGACAAGCTCCAGC  400

seq1  TTGCACTAACCCTGACACAACAGGACTGAAAGGTGAAGAAGCCTTGAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACTAACCCTGACACAACAGGACTGAAAGGTGAAGAAGCCTTGAGCC  450

seq1  CAGTTTCAAGCAAGCATTTATAAAGGTGAGCAAACAAGCAAGGGGGTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCAAGCAAGCATTTATAAAGGTGAGCAAACAAGCAAGGGGGTTTC  500

seq1  TTGCCTGGAATACATCTGATTTGGGGACTATTATGGAATTTCATTGTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTGGAATACATCTGATTTGGGGACTATTATGGAATTTCATTGTCCT  550

seq1  TAAAAATAATTGGCTGGTGCTGGGAGCCAAACCATAAACTTAACTTCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATAATTGGCTGGTGCTGGGAGCCAAACCATAAACTTAACTTCTGC  600

seq1  TTTACTTCTGGTCGGTAGTTGTTAGGAAGTGAAGTGCCAGGATCAGGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTCTGGTCGGTAGTTGTTAGGAAGTGAAGTGCCAGGATCAGGCCT  650

seq1  GTTGGAGAGTAAATTGGAAACTACTACTAGGCAAAGGTTTATTGGGGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGAGAGTAAATTGGAAACTACTACTAGGCAAAGGTTTATTGGGGGGA  700

seq1  GTAACCTGGAAATTGGTGCTAGGTGCCAGCTTGTTGGTTAACTCAAATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACCTGGAAATTGGTGCTAGGTGCCAGCTTGTTGGTTAACTCAAATTC  750

seq1  ATCCTTAGTTCAGGTTCTCTAAGATGGAGTCTGAACCAAGATCTGGTCTC  800
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATCCTTAGTTCA-GTTCTCTAAGATGGAGTCTGAACCAAGATCTGGTCTC  799

seq1  TCAGCTTCCACACAATCTAATCTAGGCCTA  830
      ||||||||||||||||||||||||||||||
seq2  TCAGCTTCCACACAATCTAATCTAGGCCTA  829